RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 SMRP1Q8NCR6 262 aa17.75■□□□□ 0.43
NDFIP1-204ENST00000509436 MRPL44Q9H9J2 332 aaKnown RBP17.75■□□□□ 0.43
NDFIP1-204ENST00000509436 POLD4Q9HCU8 107 aa17.75■□□□□ 0.43
NDFIP1-204ENST00000509436 SLC39A2Q9NP94 309 aa17.75■□□□□ 0.43
NDFIP1-204ENST00000509436 GPRC5CQ9NQ84 441 aa17.75■□□□□ 0.43
NDFIP1-204ENST00000509436 OLFML3Q9NRN5 406 aa17.75■□□□□ 0.43
NDFIP1-204ENST00000509436 C17orf102A2RUQ5 167 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 SFI1A8K8P3 1242 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 LINC00271P0C7V0 271 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 MAPTP10636 758 aaKnown RBP17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 SMTNP53814 917 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 STK4Q13043 487 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 ZNF618Q5T7W0 954 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 EFCAB12Q6NXP0 572 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 LMBR1Q8WVP7 490 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 PSPC1Q8WXF1 523 aaKnown RBP17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 TOP1MTQ969P6 601 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 TMEM143Q96AN5 459 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 DNAJC25Q9H1X3 360 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 SETD4Q9NVD3 440 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 TBC1D7Q9P0N9 293 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 CLEC1BQ9P126 229 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 GTF2IRD1Q9UHL9 959 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 GDAQ9Y2T3 454 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 TPRP12270 2363 aaKnown RBP17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 ACACBO00763 2458 aa17.74■□□□□ 0.43
NDFIP1-204ENST00000509436 H0YCG3 227 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 GRM6O15303 877 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 PDGFBP01127 241 aaPredicted RBP17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 BMP6P22004 513 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 ARL2P36404 184 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 PEX3P56589 373 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 ALCAMQ13740 583 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 MXD4Q14582 209 aaPredicted RBP17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 COBLL1Q53SF7 1204 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 FRMD5Q7Z6J6 570 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 SMYD4Q8IYR2 804 aaPredicted RBP17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 KIAA0895Q8NCT3 520 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 DBF4BQ8NFT6 615 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 SPIRE2Q8WWL2 714 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 WNT8BQ93098 351 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 HPS3Q969F9 1004 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 RMDN1Q96DB5 314 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 RIPOR3Q96MK2 946 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 CNTNAP3BQ96NU0 1288 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 MAP7D2Q96T17 732 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 YME1L1Q96TA2 773 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 CNTNAP3Q9BZ76 1288 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 HDAC6Q9UBN7 1215 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 PCDHA2Q9Y5H9 948 aa17.73■□□□□ 0.43
NDFIP1-204ENST00000509436 CCDC169A6NNP5 214 aa17.72■□□□□ 0.43
NDFIP1-204ENST00000509436 K7ENM7 598 aa17.72■□□□□ 0.43
NDFIP1-204ENST00000509436 PSMA7O14818 248 aa17.72■□□□□ 0.43
NDFIP1-204ENST00000509436 ASAP2O43150 1006 aa17.72■□□□□ 0.43
NDFIP1-204ENST00000509436 GCNT3O95395 438 aa17.72■□□□□ 0.43
NDFIP1-204ENST00000509436 RB1P06400 928 aa17.72■□□□□ 0.43
NDFIP1-204ENST00000509436 ABCD1P33897 745 aa17.72■□□□□ 0.43
NDFIP1-204ENST00000509436 PTK7Q13308 1070 aa17.72■□□□□ 0.43
NDFIP1-204ENST00000509436 PTPN21Q16825 1174 aa17.72■□□□□ 0.43
NDFIP1-204ENST00000509436 L1TD1Q5T7N2 865 aaKnown RBP17.72■□□□□ 0.43
NDFIP1-204ENST00000509436 LRRC71Q8N4P6 559 aa17.72■□□□□ 0.43
NDFIP1-204ENST00000509436 KMT5AQ9NQR1 393 aa17.72■□□□□ 0.43
NDFIP1-204ENST00000509436 SUCLA2Q9P2R7 463 aaPredicted RBP17.72■□□□□ 0.43
NDFIP1-204ENST00000509436 PCDHB13Q9Y5F0 798 aa17.72■□□□□ 0.43
NDFIP1-204ENST00000509436 UBE4BO95155 1302 aa17.72■□□□□ 0.43
NDFIP1-204ENST00000509436 MBLAC1A4D2B0 266 aaPredicted RBP17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 EIF3DO15371 548 aaKnown RBP eCLIP17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 SCP2P22307 547 aa17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 PRCPP42785 496 aa17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 NAMPTP43490 491 aa17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 ZNF165P49910 485 aa17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 CLCN3P51790 818 aa17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 TFDP1Q14186 410 aa17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 PLEKHG4Q58EX7 1191 aa17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 MARCH8Q5T0T0 291 aa17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 KLHL10Q6JEL2 608 aa17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 C11orf57Q6ZUT1 292 aaPredicted RBP17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 DGLUCYQ7Z3D6 616 aa17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 GUF1Q8N442 669 aaKnown RBP17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 ASAP3Q8TDY4 903 aa17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 DHTKD1Q96HY7 919 aaPredicted RBP17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 BPIFA3Q9BQP9 254 aa17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 C11orf84Q9BUA3 381 aaPredicted RBP17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 AKT3Q9Y243 479 aa17.71■□□□□ 0.43
NDFIP1-204ENST00000509436 SMIM35A0A1B0GVV1 85 aa17.7■□□□□ 0.42
NDFIP1-204ENST00000509436 PPP1R3GB7ZBB8 358 aa17.7■□□□□ 0.42
NDFIP1-204ENST00000509436 GLRA2P23416 452 aa17.7■□□□□ 0.42
NDFIP1-204ENST00000509436 ERCC5P28715 1186 aaPredicted RBP17.7■□□□□ 0.42
NDFIP1-204ENST00000509436 NMT1P30419 496 aaKnown RBP17.7■□□□□ 0.42
NDFIP1-204ENST00000509436 HOXC8P31273 242 aa17.7■□□□□ 0.42
NDFIP1-204ENST00000509436 NPTX2P47972 431 aa17.7■□□□□ 0.42
NDFIP1-204ENST00000509436 NDUFV1P49821 464 aa17.7■□□□□ 0.42
NDFIP1-204ENST00000509436 NCKAP1LP55160 1127 aa17.7■□□□□ 0.42
NDFIP1-204ENST00000509436 PAK1Q13153 545 aa17.7■□□□□ 0.42
NDFIP1-204ENST00000509436 ZNF720Q7Z2F6 126 aa17.7■□□□□ 0.42
NDFIP1-204ENST00000509436 RHPN2Q8IUC4 686 aa17.7■□□□□ 0.42
NDFIP1-204ENST00000509436 LINC01465Q8N7H1 131 aa17.7■□□□□ 0.42
NDFIP1-204ENST00000509436 TMEM105Q8N8V8 129 aa17.7■□□□□ 0.42
NDFIP1-204ENST00000509436 DEPTORQ8TB45 409 aa17.7■□□□□ 0.42
NDFIP1-204ENST00000509436 FAM200AQ8TCP9 573 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms