RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 APOL6Q9BWW8 343 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 CDT1Q9H211 546 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 ELAC1Q9H777 363 aaKnown RBP16.21■□□□□ 0.19
RNF4-213ENST00000509388 UBN1Q9NPG3 1134 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 TYW1Q9NV66 732 aaKnown RBP16.21■□□□□ 0.19
RNF4-213ENST00000509388 TMEM161AQ9NX61 479 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 PARP2Q9UGN5 583 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 IPPQ9Y573 584 aa16.21■□□□□ 0.19
RNF4-213ENST00000509388 KIAA0391O15091 583 aaKnown RBP16.2■□□□□ 0.18
RNF4-213ENST00000509388 TGFB1I1O43294 461 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 HOXA2O43364 376 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 ZNF623O75123 536 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 LDHAP00338 332 aaKnown RBP16.2■□□□□ 0.18
RNF4-213ENST00000509388 RPL13P26373 211 aaKnown RBP16.2■□□□□ 0.18
RNF4-213ENST00000509388 HOXD13P35453 343 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 YARSP54577 528 aaKnown RBP16.2■□□□□ 0.18
RNF4-213ENST00000509388 OSTNP61366 133 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 FAM189BP81408 668 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 HSP90AA2PQ14568 343 aaPredicted RBP16.2■□□□□ 0.18
RNF4-213ENST00000509388 C9orf50Q5SZB4 431 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 FAM117BQ6P1L5 589 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 CHRDL2Q6WN34 429 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 NPAS4Q8IUM7 802 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 ABI1Q8IZP0 508 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 PHOSPHO2Q8TCD6 241 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 SLC9A7Q96T83 725 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 IKZF4Q9H2S9 585 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 PCIF1Q9H4Z3 704 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 AGPAT3Q9NRZ7 376 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 ANO10Q9NW15 660 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 CXXC1Q9P0U4 656 aaPredicted RBP16.2■□□□□ 0.18
RNF4-213ENST00000509388 AGO2Q9UKV8 859 aaKnown RBP16.2■□□□□ 0.18
RNF4-213ENST00000509388 STYXL1Q9Y6J8 313 aa16.2■□□□□ 0.18
RNF4-213ENST00000509388 MKI67P46013 3256 aaKnown RBP16.2■□□□□ 0.18
RNF4-213ENST00000509388 MYH11P35749 1972 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 A0A0B4J269 797 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 BICDL2A1A5D9 508 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 TISP43B9A030 160 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 CLIC2O15247 247 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 OGTO15294 1046 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 ATP2A2P16615 1042 aaKnown RBP16.19■□□□□ 0.18
RNF4-213ENST00000509388 BMP6P22004 513 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 DEFB103AP81534 67 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 STX1AQ16623 288 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 SLC39A4Q6P5W5 647 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 MRPL10Q7Z7H8 261 aaKnown RBP16.19■□□□□ 0.18
RNF4-213ENST00000509388 NELFBQ8WX92 580 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 P2RX5Q93086 422 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 TOP1MTQ969P6 601 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 ACAP3Q96P50 834 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 KCTD10Q9H3F6 313 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 NXF3Q9H4D5 531 aaKnown RBP16.19■□□□□ 0.18
RNF4-213ENST00000509388 SNTG2Q9NY99 539 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 HES2Q9Y543 173 aa16.19■□□□□ 0.18
RNF4-213ENST00000509388 SCN5AQ14524 2016 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 ZMYM2Q9UBW7 1377 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 SYCE3A1L190 88 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 PPP1R3GB7ZBB8 358 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 EXOC3O60645 756 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 CCDC192P0DO97 292 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 CD44P16070 742 aaKnown RBP16.18■□□□□ 0.18
RNF4-213ENST00000509388 AKAP5P24588 427 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 CCNE1P24864 410 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 ADSSP30520 456 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 GRM5P41594 1212 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 CYP2J2P51589 502 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 PAK1Q13153 545 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 GLB1LQ6UWU2 654 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 TDHQ8IZJ6 230 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 SMG8Q8ND04 991 aaKnown RBP16.18■□□□□ 0.18
RNF4-213ENST00000509388 LPPQ93052 612 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 CBWD1Q9BRT8 395 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 SEMA6BQ9H3T3 888 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 RSAD1Q9HA92 442 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 KIAA1586Q9HCI6 787 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 TOPORSQ9NS56 1045 aaPredicted RBP16.18■□□□□ 0.18
RNF4-213ENST00000509388 HSPBP1Q9NZL4 362 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 CTNND2Q9UQB3 1225 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 TRAF3IP3Q9Y228 551 aa16.18■□□□□ 0.18
RNF4-213ENST00000509388 LTBP2Q14767 1821 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 ABLIM1O14639 778 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 NR3C1P04150 777 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 CLTAP09496 248 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 ACOT2P49753 483 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 LRRC63Q05C16 580 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 TYRO3Q06418 890 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 ADAM9Q13443 819 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 MYBPC2Q14324 1141 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 DPCR1Q3MIW9 517 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 SEZ6Q53EL9 994 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 RASIP1Q5U651 963 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 CENPPQ6IPU0 288 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 ZNF598Q86UK7 904 aaKnown RBP16.17■□□□□ 0.18
RNF4-213ENST00000509388 HERC6Q8IVU3 1022 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 C12orf56Q8IXR9 622 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 GPD1LQ8N335 351 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 CEP120Q8N960 986 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 XXYLT1Q8NBI6 393 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 SAAL1Q96ER3 474 aa16.17■□□□□ 0.18
RNF4-213ENST00000509388 YME1L1Q96TA2 773 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms