RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 WDR44Q5JSH3 913 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 GPAT2Q6NUI2 795 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 NFRKBQ6P4R8 1299 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 GJB7Q6PEY0 223 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 C15orf39Q6ZRI6 1047 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 PEX26Q7Z412 305 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 ZNF467Q7Z7K2 595 aaPredicted RBP9.98□□□□□ -0.81
HTT-205ENST00000509043 ZBTB8OSQ8IWT0 167 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 LNX1Q8TBB1 728 aaPredicted RBP9.98□□□□□ -0.81
HTT-205ENST00000509043 PLEKHO2Q8TD55 490 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 SCFD2Q8WU76 684 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 SLC10A4Q96EP9 437 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 CLMNQ96JQ2 1002 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 PKNOX2Q96KN3 472 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 FNBP1Q96RU3 617 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 PNKPQ96T60 521 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 NAP1L3Q99457 506 aaPredicted RBP9.98□□□□□ -0.81
HTT-205ENST00000509043 RHOXF2Q9BQY4 288 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 SH2D3AQ9BRG2 576 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 FUT8Q9BYC5 575 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 SMARCAD1Q9H4L7 1026 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 TAF1DQ9H5J8 278 aaPredicted RBP9.98□□□□□ -0.81
HTT-205ENST00000509043 C1orf112Q9NSG2 853 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 AGO2Q9UKV8 859 aaKnown RBP9.98□□□□□ -0.81
HTT-205ENST00000509043 TTC7AQ9ULT0 858 aaPredicted RBP9.98□□□□□ -0.81
HTT-205ENST00000509043 ADGRA3Q8IWK6 1321 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 LRRC37A2A6NM11 1700 aa9.98□□□□□ -0.81
HTT-205ENST00000509043 WDR81Q562E7 1941 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 POLR2AP24928 1970 aaKnown RBP9.97□□□□□ -0.81
HTT-205ENST00000509043 A0A0B4J269 797 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 IGKV6-21A0A0C4DH24 114 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 MIF4GDA9UHW6 222 aaKnown RBP9.97□□□□□ -0.81
HTT-205ENST00000509043 TISP43B9A030 160 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 CCDC188H7C350 402 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 PDE2AO00408 941 aaPredicted RBP9.97□□□□□ -0.81
HTT-205ENST00000509043 SOCS7O14512 581 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 HBP1O60381 514 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 RTN2O75298 545 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 MTA2O94776 668 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 TBXAS1P24557 533 aaPredicted RBP9.97□□□□□ -0.81
HTT-205ENST00000509043 PDE6CP51160 858 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 GTF2A2P52657 109 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 VSNL1P62760 191 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 ERVK-9P63128 1117 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 GPC5P78333 572 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 POU5F1Q01860 360 aaKnown RBP9.97□□□□□ -0.81
HTT-205ENST00000509043 MAP2K1Q02750 393 aaPredicted RBP9.97□□□□□ -0.81
HTT-205ENST00000509043 IRF5Q13568 498 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 TFDP1Q14186 410 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 ARHGAP44Q17R89 818 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 ZACNQ401N2 412 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 CDCA2Q69YH5 1023 aaPredicted RBP9.97□□□□□ -0.81
HTT-205ENST00000509043 C11orf63Q6NUN7 778 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 CCDC62Q6P9F0 684 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 SV2AQ7L0J3 742 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 TAS1R3Q7RTX0 852 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 GLYCTKQ8IVS8 523 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 DHX37Q8IY37 1157 aaKnown RBP9.97□□□□□ -0.81
HTT-205ENST00000509043 GPRC5AQ8NFJ5 357 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 OLIG1Q8TAK6 271 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 HELQQ8TDG4 1101 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 COG1Q8WTW3 980 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 CCDC127Q96BQ5 260 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 SAAL1Q96ER3 474 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 TRIM11Q96F44 468 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 PCYT2Q99447 389 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 GPR20Q99678 358 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 FAM213AQ9BRX8 229 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 KIFC3Q9BVG8 833 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 PACSIN1Q9BY11 444 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 MRPL4Q9BYD3 311 aaKnown RBP9.97□□□□□ -0.81
HTT-205ENST00000509043 UBXN6Q9BZV1 441 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 VTA1Q9NP79 307 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 AMFRQ9UKV5 643 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 SIP14410 1827 aa9.97□□□□□ -0.81
HTT-205ENST00000509043 GOLGA8IPA6NC78 632 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 LRRIQ4A6NIV6 560 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 GOLGA8JA6NMD2 632 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 PGRMC1O00264 195 aaKnown RBP9.96□□□□□ -0.82
HTT-205ENST00000509043 ZNF185O15231 689 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 TOM1L1O75674 476 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 HSPA6P17066 643 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 CBX1P83916 185 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 CDR2Q01850 454 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 NNTQ13423 1086 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 PRPF4BQ13523 1007 aaKnown RBP9.96□□□□□ -0.82
HTT-205ENST00000509043 LAMC2Q13753 1193 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 KYAT1Q16773 422 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 ZNF484Q5JVG2 852 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 C8orf74Q6P047 294 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 EMBQ6PCB8 327 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 CCNI2Q6ZMN8 369 aaPredicted RBP9.96□□□□□ -0.82
HTT-205ENST00000509043 ANKRD23Q86SG2 305 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 DAAM2Q86T65 1068 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 ARHGEF19Q8IW93 802 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 IFT20Q8IY31 132 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 PPM1KQ8N3J5 372 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 RASGEF1CQ8N431 466 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 ASAP3Q8TDY4 903 aa9.96□□□□□ -0.82
HTT-205ENST00000509043 EPS8L1Q8TE68 723 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms