RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 PPM1AP35813 382 aa10.01□□□□□ -0.81
NUP54-207ENST00000508583 TAP1Q03518 808 aa10.01□□□□□ -0.81
NUP54-207ENST00000508583 RNASELQ05823 741 aaKnown RBP10.01□□□□□ -0.81
NUP54-207ENST00000508583 PSMD2Q13200 908 aa10.01□□□□□ -0.81
NUP54-207ENST00000508583 NOLC1Q14978 699 aaKnown RBP eCLIP10.01□□□□□ -0.81
NUP54-207ENST00000508583 LONRF3Q496Y0 759 aa10.01□□□□□ -0.81
NUP54-207ENST00000508583 TPRNQ4KMQ1 711 aa10.01□□□□□ -0.81
NUP54-207ENST00000508583 NOMO2Q5JPE7 1267 aa10.01□□□□□ -0.81
NUP54-207ENST00000508583 FAM26FQ5R3K3 315 aa10.01□□□□□ -0.81
NUP54-207ENST00000508583 L1TD1Q5T7N2 865 aaKnown RBP10.01□□□□□ -0.81
NUP54-207ENST00000508583 Q7L0L9 218 aa10.01□□□□□ -0.81
NUP54-207ENST00000508583 ELOA2Q8IYF1 753 aaPredicted RBP10.01□□□□□ -0.81
NUP54-207ENST00000508583 SYCP3Q8IZU3 236 aa10.01□□□□□ -0.81
NUP54-207ENST00000508583 DEFB123Q8N688 67 aa10.01□□□□□ -0.81
NUP54-207ENST00000508583 SPDYE1Q8NFV5 336 aaPredicted RBP10.01□□□□□ -0.81
NUP54-207ENST00000508583 CLP1Q92989 425 aaKnown RBP10.01□□□□□ -0.81
NUP54-207ENST00000508583 FAM193BQ96PV7 902 aaPredicted RBP10.01□□□□□ -0.81
NUP54-207ENST00000508583 GAS2L1Q99501 681 aaPredicted RBP10.01□□□□□ -0.81
NUP54-207ENST00000508583 C11orf84Q9BUA3 381 aaPredicted RBP10.01□□□□□ -0.81
NUP54-207ENST00000508583 TARS2Q9BW92 718 aaKnown RBP10.01□□□□□ -0.81
NUP54-207ENST00000508583 RC3H2Q9HBD1 1191 aaKnown RBP10.01□□□□□ -0.81
NUP54-207ENST00000508583 RMND1Q9NWS8 449 aa10.01□□□□□ -0.81
NUP54-207ENST00000508583 ANKFY1Q9P2R3 1169 aa10.01□□□□□ -0.81
NUP54-207ENST00000508583 PCDHB12Q9Y5F1 795 aa10.01□□□□□ -0.81
NUP54-207ENST00000508583 RALGAPA2Q2PPJ7 1873 aa10□□□□□ -0.81
NUP54-207ENST00000508583 MYO9BQ13459 2157 aa10□□□□□ -0.81
NUP54-207ENST00000508583 KIAA0391O15091 583 aaKnown RBP10□□□□□ -0.81
NUP54-207ENST00000508583 FGFR1P11362 822 aa10□□□□□ -0.81
NUP54-207ENST00000508583 ATF7P17544 494 aaPredicted RBP10□□□□□ -0.81
NUP54-207ENST00000508583 NMT1P30419 496 aaKnown RBP10□□□□□ -0.81
NUP54-207ENST00000508583 CTNNB1P35222 781 aa10□□□□□ -0.81
NUP54-207ENST00000508583 ALDH7A1P49419 539 aaKnown RBP10□□□□□ -0.81
NUP54-207ENST00000508583 ERVK-21P61565 698 aa10□□□□□ -0.81
NUP54-207ENST00000508583 SNRPFP62306 86 aaKnown RBP10□□□□□ -0.81
NUP54-207ENST00000508583 MCL1Q07820 350 aa10□□□□□ -0.81
NUP54-207ENST00000508583 BMS1Q14692 1282 aaKnown RBP10□□□□□ -0.81
NUP54-207ENST00000508583 PAN2Q504Q3 1202 aaKnown RBP10□□□□□ -0.81
NUP54-207ENST00000508583 UBXN11Q5T124 520 aa10□□□□□ -0.81
NUP54-207ENST00000508583 NT5DC1Q5TFE4 455 aa10□□□□□ -0.81
NUP54-207ENST00000508583 FMR1NBQ8N0W7 255 aaPredicted RBP10□□□□□ -0.81
NUP54-207ENST00000508583 FBXO22Q8NEZ5 403 aa10□□□□□ -0.81
NUP54-207ENST00000508583 GOLGA5Q8TBA6 731 aa10□□□□□ -0.81
NUP54-207ENST00000508583 HELQQ8TDG4 1101 aa10□□□□□ -0.81
NUP54-207ENST00000508583 STAMQ92783 540 aa10□□□□□ -0.81
NUP54-207ENST00000508583 ACAP3Q96P50 834 aa10□□□□□ -0.81
NUP54-207ENST00000508583 CASD1Q96PB1 797 aa10□□□□□ -0.81
NUP54-207ENST00000508583 TSPAN18Q96SJ8 248 aa10□□□□□ -0.81
NUP54-207ENST00000508583 FIZ1Q96SL8 496 aa10□□□□□ -0.81
NUP54-207ENST00000508583 EIF2AQ9BY44 585 aaKnown RBP10□□□□□ -0.81
NUP54-207ENST00000508583 SEMA6BQ9H3T3 888 aa10□□□□□ -0.81
NUP54-207ENST00000508583 GOLPH3LQ9H4A5 285 aa10□□□□□ -0.81
NUP54-207ENST00000508583 NXF3Q9H4D5 531 aaKnown RBP10□□□□□ -0.81
NUP54-207ENST00000508583 CGNQ9P2M7 1197 aaKnown RBP10□□□□□ -0.81
NUP54-207ENST00000508583 PARP2Q9UGN5 583 aa10□□□□□ -0.81
NUP54-207ENST00000508583 FNDC1Q4ZHG4 1894 aaPredicted RBP10□□□□□ -0.81
NUP54-207ENST00000508583 CDH23Q9H251 3354 aa10□□□□□ -0.81
NUP54-207ENST00000508583 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.99□□□□□ -0.81
NUP54-207ENST00000508583 C5orf67F2Z3F1 127 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 INPPL1O15357 1258 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 OFD1O75665 1012 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 PPP1R37O75864 691 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 RECQL4O94761 1208 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 LDHAP00338 332 aaKnown RBP9.99□□□□□ -0.81
NUP54-207ENST00000508583 RPN1P04843 607 aaKnown RBP9.99□□□□□ -0.81
NUP54-207ENST00000508583 PROZP22891 400 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 BMPR1AP36894 532 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 GRM5P41594 1212 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 POU5F1Q01860 360 aaKnown RBP9.99□□□□□ -0.81
NUP54-207ENST00000508583 GRIK3Q13003 919 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 CUL4BQ13620 913 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 KCNB1Q14721 858 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 PTPROQ16827 1216 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 CLLU1OSQ5K130 101 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 AGMOQ6ZNB7 445 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 HS2ST1Q7LGA3 356 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 TAS1R3Q7RTX0 852 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 TMEM192Q8IY95 271 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 SMG8Q8ND04 991 aaKnown RBP9.99□□□□□ -0.81
NUP54-207ENST00000508583 ARNTL2Q8WYA1 636 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 P2RX5Q93086 422 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 FAM161BQ96MY7 647 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 APOL6Q9BWW8 343 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 CDT1Q9H211 546 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 BLZF1Q9H2G9 400 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 PLEKHA5Q9HAU0 1116 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 PTPRHQ9HD43 1115 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 SLC38A7Q9NVC3 462 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 TBC1D7Q9P0N9 293 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 INPP5FQ9Y2H2 1132 aa9.99□□□□□ -0.81
NUP54-207ENST00000508583 COL4A4P53420 1690 aaPredicted RBP9.99□□□□□ -0.81
NUP54-207ENST00000508583 LCHNA4D1U4 455 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 ARL5CA6NH57 179 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 OGTO15294 1046 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 XPOTO43592 962 aaKnown RBP9.98□□□□□ -0.81
NUP54-207ENST00000508583 ARHGEF15O94989 841 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 CLTAP09496 248 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 GARTP22102 1010 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 MLH1P40692 756 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 PPP1R2P41236 205 aa9.98□□□□□ -0.81
NUP54-207ENST00000508583 KRT17Q04695 432 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms