RNA–Protein interactions for RNA: ENST00000508337.1

GYPA-205, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPA, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-205ENST00000508337 UAP1L1Q3KQV9 507 aa6.78□□□□□ -1.32
GYPA-205ENST00000508337 MIER2Q8N344 545 aa6.78□□□□□ -1.32
GYPA-205ENST00000508337 CBARPQ8N350 705 aaPredicted RBP6.78□□□□□ -1.32
GYPA-205ENST00000508337 OR7D4Q8NG98 312 aa6.78□□□□□ -1.32
GYPA-205ENST00000508337 EDAQ92838 391 aa6.78□□□□□ -1.32
GYPA-205ENST00000508337 PGBD4Q96DM1 585 aa6.78□□□□□ -1.32
GYPA-205ENST00000508337 GPR87Q9BY21 358 aa6.78□□□□□ -1.32
GYPA-205ENST00000508337 KRTAP9-9Q9BYP9 154 aa6.78□□□□□ -1.32
GYPA-205ENST00000508337 KRTAP9-4Q9BYQ2 154 aa6.78□□□□□ -1.32
GYPA-205ENST00000508337 BCO1Q9HAY6 547 aa6.78□□□□□ -1.32
GYPA-205ENST00000508337 SPON1Q9HCB6 807 aa6.78□□□□□ -1.32
GYPA-205ENST00000508337 DDX56Q9NY93 547 aaKnown RBP6.78□□□□□ -1.32
GYPA-205ENST00000508337 MOCS1Q9NZB8 636 aa6.78□□□□□ -1.32
GYPA-205ENST00000508337 CLCA2Q9UQC9 943 aa6.78□□□□□ -1.32
GYPA-205ENST00000508337 TSC22D4Q9Y3Q8 395 aa6.78□□□□□ -1.32
GYPA-205ENST00000508337 B5MCH6 92 aa6.77□□□□□ -1.33
GYPA-205ENST00000508337 DTNBO60941 627 aa6.77□□□□□ -1.33
GYPA-205ENST00000508337 STC2O76061 302 aa6.77□□□□□ -1.33
GYPA-205ENST00000508337 HK1P19367 917 aa6.77□□□□□ -1.33
GYPA-205ENST00000508337 MCAMP43121 646 aa6.77□□□□□ -1.33
GYPA-205ENST00000508337 RECQLP46063 649 aaPredicted RBP6.77□□□□□ -1.33
GYPA-205ENST00000508337 PCBP2Q15366 365 aaKnown RBP eCLIP6.77□□□□□ -1.33
GYPA-205ENST00000508337 RSPH3Q86UC2 560 aa6.77□□□□□ -1.33
GYPA-205ENST00000508337 RHOT1Q8IXI2 618 aa6.77□□□□□ -1.33
GYPA-205ENST00000508337 FBXO18Q8NFZ0 1043 aa6.77□□□□□ -1.33
GYPA-205ENST00000508337 NRG4Q8WWG1 115 aa6.77□□□□□ -1.33
GYPA-205ENST00000508337 JADE3Q92613 823 aa6.77□□□□□ -1.33
GYPA-205ENST00000508337 CHMP4CQ96CF2 233 aa6.77□□□□□ -1.33
GYPA-205ENST00000508337 TEKT5Q96M29 485 aa6.77□□□□□ -1.33
GYPA-205ENST00000508337 CSRNP2Q9H175 543 aa6.77□□□□□ -1.33
GYPA-205ENST00000508337 ZNF277Q9NRM2 450 aaPredicted RBP6.77□□□□□ -1.33
GYPA-205ENST00000508337 AURKAIP1Q9NWT8 199 aaPredicted RBP6.77□□□□□ -1.33
GYPA-205ENST00000508337 INTUQ9ULD6 942 aa6.77□□□□□ -1.33
GYPA-205ENST00000508337 HOXA3O43365 443 aaPredicted RBP6.76□□□□□ -1.33
GYPA-205ENST00000508337 IL33O95760 270 aa6.76□□□□□ -1.33
GYPA-205ENST00000508337 RPLP2P05387 115 aaKnown RBP6.76□□□□□ -1.33
GYPA-205ENST00000508337 PDGFRBP09619 1106 aa6.76□□□□□ -1.33
GYPA-205ENST00000508337 ACRV1P26436 265 aa6.76□□□□□ -1.33
GYPA-205ENST00000508337 NEK2P51955 445 aa6.76□□□□□ -1.33
GYPA-205ENST00000508337 MGAT2Q10469 447 aa6.76□□□□□ -1.33
GYPA-205ENST00000508337 MRPL49Q13405 166 aaKnown RBP6.76□□□□□ -1.33
GYPA-205ENST00000508337 SPDYAQ5MJ70 313 aa6.76□□□□□ -1.33
GYPA-205ENST00000508337 PRAMEF14Q5SWL7 426 aa6.76□□□□□ -1.33
GYPA-205ENST00000508337 PPP4R3AQ6IN85 833 aa6.76□□□□□ -1.33
GYPA-205ENST00000508337 RPUSD2Q8IZ73 545 aaKnown RBP6.76□□□□□ -1.33
GYPA-205ENST00000508337 CCHCR1Q8TD31 782 aa6.76□□□□□ -1.33
GYPA-205ENST00000508337 SH3RF3Q8TEJ3 882 aaPredicted RBP6.76□□□□□ -1.33
GYPA-205ENST00000508337 HDAC10Q969S8 669 aa6.76□□□□□ -1.33
GYPA-205ENST00000508337 SLC13A1Q9BZW2 595 aa6.76□□□□□ -1.33
GYPA-205ENST00000508337 LUC7L2Q9Y383 392 aaKnown RBP6.76□□□□□ -1.33
GYPA-205ENST00000508337 TEX33O43247 280 aa6.75□□□□□ -1.33
GYPA-205ENST00000508337 ADCY6O43306 1168 aa6.75□□□□□ -1.33
GYPA-205ENST00000508337 S100BP04271 92 aaPredicted RBP6.75□□□□□ -1.33
GYPA-205ENST00000508337 IL2RBP14784 551 aa6.75□□□□□ -1.33
GYPA-205ENST00000508337 C5AR1P21730 350 aa6.75□□□□□ -1.33
GYPA-205ENST00000508337 KRT85P78386 507 aa6.75□□□□□ -1.33
GYPA-205ENST00000508337 INAVAQ3KP66 663 aa6.75□□□□□ -1.33
GYPA-205ENST00000508337 USP39Q53GS9 565 aaKnown RBP6.75□□□□□ -1.33
GYPA-205ENST00000508337 DCAF17Q5H9S7 520 aaPredicted RBP6.75□□□□□ -1.33
GYPA-205ENST00000508337 MAMDC4Q6UXC1 1216 aa6.75□□□□□ -1.33
GYPA-205ENST00000508337 TFAP2CQ92754 450 aa6.75□□□□□ -1.33
GYPA-205ENST00000508337 LDAHQ9H6V9 325 aa6.75□□□□□ -1.33
GYPA-205ENST00000508337 POGKQ9P215 609 aa6.75□□□□□ -1.33
GYPA-205ENST00000508337 HECAQ9UBI9 543 aaPredicted RBP6.75□□□□□ -1.33
GYPA-205ENST00000508337 TRPS1Q9UHF7 1281 aa6.75□□□□□ -1.33
GYPA-205ENST00000508337 EIF2B4Q9UI10 523 aaKnown RBP6.75□□□□□ -1.33
GYPA-205ENST00000508337 JAG2Q9Y219 1238 aa6.75□□□□□ -1.33
GYPA-205ENST00000508337 TNKSO95271 1327 aa6.75□□□□□ -1.33
GYPA-205ENST00000508337 PPM1GO15355 546 aaPredicted RBP6.74□□□□□ -1.33
GYPA-205ENST00000508337 GPR32O75388 356 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 SNRPA1P09661 255 aaKnown RBP6.74□□□□□ -1.33
GYPA-205ENST00000508337 MGAT1P26572 445 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 FLT3LGP49771 235 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 RAP2BP61225 183 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 CREMQ03060 361 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 RRP12Q5JTH9 1297 aaKnown RBP6.74□□□□□ -1.33
GYPA-205ENST00000508337 ODR4Q5SWX8 454 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 LCE4AQ5TA78 99 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 EFCAB12Q6NXP0 572 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 XYLT1Q86Y38 959 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 C1orf210Q8IVY1 113 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 TRMT2AQ8IZ69 625 aaKnown RBP6.74□□□□□ -1.33
GYPA-205ENST00000508337 REPS2Q8NFH8 660 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 MDGA1Q8NFP4 955 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 ZFP28Q8NHY6 868 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 DPF2Q92785 391 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 WWC2-AS2Q96NR7 200 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 C1QTNF3Q9BXJ4 246 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 TDP1Q9NUW8 608 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 PARPBPQ9NWS1 579 aa6.74□□□□□ -1.33
GYPA-205ENST00000508337 AJAP1Q9UKB5 411 aaPredicted RBP6.74□□□□□ -1.33
GYPA-205ENST00000508337 ZMYM3Q14202 1370 aa6.73□□□□□ -1.33
GYPA-205ENST00000508337 ALDH1L1O75891 902 aa6.73□□□□□ -1.33
GYPA-205ENST00000508337 RECQL4O94761 1208 aa6.73□□□□□ -1.33
GYPA-205ENST00000508337 ATP5JP18859 108 aa6.73□□□□□ -1.33
GYPA-205ENST00000508337 DOK3Q7L591 496 aa6.73□□□□□ -1.33
GYPA-205ENST00000508337 CYFIP2Q96F07 1278 aa6.73□□□□□ -1.33
GYPA-205ENST00000508337 PHACTR3Q96KR7 559 aa6.73□□□□□ -1.33
GYPA-205ENST00000508337 PDCD2LQ9BRP1 358 aa6.73□□□□□ -1.33
GYPA-205ENST00000508337 ZNF341Q9BYN7 854 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms