RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 ZMYM2Q9UBW7 1377 aa11.99□□□□□ -0.49
PROM1-207ENST00000508167 ZNF263O14978 683 aa11.99□□□□□ -0.49
PROM1-207ENST00000508167 EIF4BP23588 611 aaKnown RBP11.99□□□□□ -0.49
PROM1-207ENST00000508167 APBB1IPQ7Z5R6 666 aaPredicted RBP11.99□□□□□ -0.49
PROM1-207ENST00000508167 SERINC5Q86VE9 423 aa11.99□□□□□ -0.49
PROM1-207ENST00000508167 FIZ1Q96SL8 496 aa11.99□□□□□ -0.49
PROM1-207ENST00000508167 SRRTQ9BXP5 876 aaKnown RBP11.99□□□□□ -0.49
PROM1-207ENST00000508167 SEZ6LQ9BYH1 1024 aa11.99□□□□□ -0.49
PROM1-207ENST00000508167 PDCL3Q9H2J4 239 aa11.99□□□□□ -0.49
PROM1-207ENST00000508167 H2AFXP16104 143 aaPredicted RBP11.98□□□□□ -0.49
PROM1-207ENST00000508167 MKRN4PQ13434 485 aaPredicted RBP11.98□□□□□ -0.49
PROM1-207ENST00000508167 GUF1Q8N442 669 aaKnown RBP11.98□□□□□ -0.49
PROM1-207ENST00000508167 ERGIC2Q96RQ1 377 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 HTATIP2Q9BUP3 242 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 AGPAT5Q9NUQ2 364 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 PRMT7Q9NVM4 692 aaPredicted RBP11.98□□□□□ -0.49
PROM1-207ENST00000508167 CETN3O15182 167 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 CLDN3O15551 220 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 KCNA1Q09470 495 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 PAK2Q13177 524 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 NAA15Q9BXJ9 866 aaKnown RBP11.98□□□□□ -0.49
PROM1-207ENST00000508167 FRMD4BQ9Y2L6 1034 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 MRFAP1Q9Y605 127 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 MBLAC1A4D2B0 266 aaPredicted RBP11.98□□□□□ -0.49
PROM1-207ENST00000508167 RCCD1A6NED2 376 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 HNRNPH3P31942 346 aaKnown RBP11.98□□□□□ -0.49
PROM1-207ENST00000508167 MARSP56192 900 aaKnown RBP11.98□□□□□ -0.49
PROM1-207ENST00000508167 PTENP60484 403 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 NKX3-2P78367 333 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 HIC1Q14526 733 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 ZNF568Q3ZCX4 644 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 THNSL1Q8IYQ7 743 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 TMEM161BQ8NDZ6 487 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 MMRN2Q9H8L6 949 aa11.98□□□□□ -0.49
PROM1-207ENST00000508167 IGKV6-21A0A0C4DH24 114 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 EVI5O60447 810 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 NR2F2P24468 414 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 ZNF131P52739 623 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 KCNMA1Q12791 1236 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 ADAM9Q13443 819 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 ZNF618Q5T7W0 954 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 SRGAP1Q7Z6B7 1085 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 ACRBPQ8NEB7 543 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 GOLGA5Q8TBA6 731 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 SCFD1Q8WVM8 642 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 CENPFP49454 3210 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 GOLGA8IPA6NC78 632 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 GOLGA8JA6NMD2 632 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 TADA3O75528 432 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 MTIF2P46199 727 aaKnown RBP11.97□□□□□ -0.49
PROM1-207ENST00000508167 CRYBB1P53674 252 aaPredicted RBP11.97□□□□□ -0.49
PROM1-207ENST00000508167 AMPD2Q01433 879 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 FIGNQ5HY92 759 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 C7orf61Q8IZ16 206 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 CCDC51Q96ER9 411 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 CPB2Q96IY4 423 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 CNOT6LQ96LI5 555 aaKnown RBP11.97□□□□□ -0.49
PROM1-207ENST00000508167 PDLIM7Q9NR12 457 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 GPR182O15218 404 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 NOL4O94818 638 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 CLTBP09497 229 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 CYP2C18P33260 490 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 SNX17Q15036 470 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 ZNF662Q6ZS27 426 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 RSRC2Q7L4I2 434 aaKnown RBP11.97□□□□□ -0.49
PROM1-207ENST00000508167 CAGE1Q8TC20 777 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 BAP1Q92560 729 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 MSTO1Q9BUK6 570 aa11.97□□□□□ -0.49
PROM1-207ENST00000508167 EIF3DO15371 548 aaKnown RBP eCLIP11.96□□□□□ -0.49
PROM1-207ENST00000508167 SELPP16109 830 aa11.96□□□□□ -0.49
PROM1-207ENST00000508167 ATF7IP2Q5U623 682 aa11.96□□□□□ -0.49
PROM1-207ENST00000508167 LRRC8DQ7L1W4 858 aa11.96□□□□□ -0.49
PROM1-207ENST00000508167 SCLYQ96I15 445 aa11.96□□□□□ -0.49
PROM1-207ENST00000508167 TUBGCP2Q9BSJ2 902 aa11.96□□□□□ -0.49
PROM1-207ENST00000508167 CDHR5Q9HBB8 845 aa11.96□□□□□ -0.49
PROM1-207ENST00000508167 CKBP12277 381 aa11.96□□□□□ -0.49
PROM1-207ENST00000508167 KRT13P13646 458 aa11.96□□□□□ -0.49
PROM1-207ENST00000508167 DARSP14868 501 aaKnown RBP11.96□□□□□ -0.49
PROM1-207ENST00000508167 ASTE1Q2TB18 679 aaPredicted RBP11.96□□□□□ -0.49
PROM1-207ENST00000508167 SESTD1Q86VW0 696 aa11.96□□□□□ -0.49
PROM1-207ENST00000508167 LBHD1Q9BQE6 289 aaPredicted RBP11.96□□□□□ -0.49
PROM1-207ENST00000508167 TYW1Q9NV66 732 aaKnown RBP11.96□□□□□ -0.49
PROM1-207ENST00000508167 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.96□□□□□ -0.49
PROM1-207ENST00000508167 A0A1W2PQJ5 194 aa11.96□□□□□ -0.5
PROM1-207ENST00000508167 KIF2AO00139 706 aaPredicted RBP11.96□□□□□ -0.5
PROM1-207ENST00000508167 MAPTP10636 758 aaKnown RBP11.96□□□□□ -0.5
PROM1-207ENST00000508167 PRKCSHP14314 528 aaPredicted RBP11.96□□□□□ -0.5
PROM1-207ENST00000508167 CD52P31358 61 aa11.96□□□□□ -0.5
PROM1-207ENST00000508167 SPAG1Q07617 926 aa11.96□□□□□ -0.5
PROM1-207ENST00000508167 LRRC26Q2I0M4 334 aa11.96□□□□□ -0.5
PROM1-207ENST00000508167 SLFN12LQ6IEE8 588 aa11.96□□□□□ -0.5
PROM1-207ENST00000508167 FAM126BQ8IXS8 530 aa11.96□□□□□ -0.5
PROM1-207ENST00000508167 KIF18AQ8NI77 898 aa11.96□□□□□ -0.5
PROM1-207ENST00000508167 PCMTD1Q96MG8 357 aaPredicted RBP11.96□□□□□ -0.5
PROM1-207ENST00000508167 PARP2Q9UGN5 583 aa11.96□□□□□ -0.5
PROM1-207ENST00000508167 B4GALT5O43286 388 aa11.95□□□□□ -0.5
PROM1-207ENST00000508167 LCA5LO95447 670 aa11.95□□□□□ -0.5
PROM1-207ENST00000508167 TUBB4AP04350 444 aa11.95□□□□□ -0.5
PROM1-207ENST00000508167 EPB41P11171 864 aaKnown RBP11.95□□□□□ -0.5
PROM1-207ENST00000508167 NCKAP1LP55160 1127 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms