RNA–Protein interactions for RNA: ENST00000508164.5

TSPAN17-207, Transcript of tetraspanin 17, humanhuman

TSL 1 (best) BASIC

Gene TSPAN17, Length 2,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-207ENST00000508164 PGM2Q96G03 612 aa23.09■■□□□ 1.29
TSPAN17-207ENST00000508164 CCDC113Q9H0I3 377 aa23.09■■□□□ 1.29
TSPAN17-207ENST00000508164 DBR1Q9UK59 544 aaKnown RBP23.09■■□□□ 1.29
TSPAN17-207ENST00000508164 PEX3P56589 373 aa23.09■■□□□ 1.29
TSPAN17-207ENST00000508164 FMO1Q01740 532 aa23.09■■□□□ 1.29
TSPAN17-207ENST00000508164 SLC13A5Q86YT5 568 aaPredicted RBP23.09■■□□□ 1.29
TSPAN17-207ENST00000508164 ZNF317Q96PQ6 595 aaPredicted RBP23.09■■□□□ 1.29
TSPAN17-207ENST00000508164 GEMIN8Q9NWZ8 242 aaKnown RBP23.09■■□□□ 1.29
TSPAN17-207ENST00000508164 ZNF646O15015 1829 aaPredicted RBP23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 NFIBO00712 420 aa23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 DHX15O43143 795 aaKnown RBP23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 P4HBP07237 508 aaKnown RBP23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 PLS3P13797 630 aa23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 COILP38432 576 aaPredicted RBP23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 SCTRP47872 440 aa23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 TRAF1Q13077 416 aa23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 MYBPC2Q14324 1141 aa23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 RASA3Q14644 834 aa23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 FAM71AQ8IYT1 594 aa23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 FAM84AQ96KN4 292 aa23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 RPS6KC1Q96S38 1066 aa23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 RIT2Q99578 217 aa23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 PRMT1Q99873 361 aaKnown RBP23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 JPH2Q9BR39 696 aaPredicted RBP23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 KIFC3Q9BVG8 833 aa23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 HERC5Q9UII4 1024 aaKnown RBP23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 PODXLO00592 558 aa23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 IFNAR2P48551 515 aa23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 DRP2Q13474 957 aa23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 SIX1Q15475 284 aaPredicted RBP23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 DHX38Q92620 1227 aaKnown RBP23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 ZNF653Q96CK0 615 aa23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 MTRF1LQ9UGC7 380 aaKnown RBP23.08■■□□□ 1.29
TSPAN17-207ENST00000508164 RIPK2O43353 540 aa23.07■■□□□ 1.28
TSPAN17-207ENST00000508164 DLATP10515 647 aaKnown RBP23.07■■□□□ 1.28
TSPAN17-207ENST00000508164 CDR1P51861 262 aa23.07■■□□□ 1.28
TSPAN17-207ENST00000508164 PLCB4Q15147 1175 aa23.07■■□□□ 1.28
TSPAN17-207ENST00000508164 UGCGQ16739 394 aa23.07■■□□□ 1.28
TSPAN17-207ENST00000508164 CCT6BQ92526 530 aa23.07■■□□□ 1.28
TSPAN17-207ENST00000508164 WNT8AQ9H1J5 351 aa23.07■■□□□ 1.28
TSPAN17-207ENST00000508164 TOPORSQ9NS56 1045 aaPredicted RBP23.07■■□□□ 1.28
TSPAN17-207ENST00000508164 ALAS1P13196 640 aa23.07■■□□□ 1.28
TSPAN17-207ENST00000508164 HSPA6P17066 643 aa23.07■■□□□ 1.28
TSPAN17-207ENST00000508164 SNX1Q13596 522 aa23.07■■□□□ 1.28
TSPAN17-207ENST00000508164 CLUL1Q15846 466 aa23.07■■□□□ 1.28
TSPAN17-207ENST00000508164 LRRC34Q8IZ02 419 aa23.07■■□□□ 1.28
TSPAN17-207ENST00000508164 C1orf54Q8WWF1 131 aa23.07■■□□□ 1.28
TSPAN17-207ENST00000508164 CENPTQ96BT3 561 aa23.07■■□□□ 1.28
TSPAN17-207ENST00000508164 ACTR5Q9H9F9 607 aaPredicted RBP23.07■■□□□ 1.28
TSPAN17-207ENST00000508164 CLDN3O15551 220 aa23.06■■□□□ 1.28
TSPAN17-207ENST00000508164 PHLDB2Q86SQ0 1253 aa23.06■■□□□ 1.28
TSPAN17-207ENST00000508164 HVCN1Q96D96 273 aa23.06■■□□□ 1.28
TSPAN17-207ENST00000508164 DDX23Q9BUQ8 820 aaKnown RBP23.06■■□□□ 1.28
TSPAN17-207ENST00000508164 CCPG1Q9ULG6 757 aa23.06■■□□□ 1.28
TSPAN17-207ENST00000508164 P4HA2O15460 535 aa23.06■■□□□ 1.28
TSPAN17-207ENST00000508164 ADSSP30520 456 aa23.06■■□□□ 1.28
TSPAN17-207ENST00000508164 TCEAL1Q15170 157 aa23.06■■□□□ 1.28
TSPAN17-207ENST00000508164 PLA2G4FQ68DD2 849 aa23.06■■□□□ 1.28
TSPAN17-207ENST00000508164 INTS9Q9NV88 658 aaKnown RBP23.06■■□□□ 1.28
TSPAN17-207ENST00000508164 TRPC5Q9UL62 973 aaPredicted RBP23.06■■□□□ 1.28
TSPAN17-207ENST00000508164 CYP11B1P15538 503 aa23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 RNF207Q6ZRF8 634 aa23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 ARMC9Q7Z3E5 817 aa23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 ART4Q93070 314 aa23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 HOMER2Q9NSB8 354 aa23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 FOXO6A8MYZ6 492 aa23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 GZMAP12544 262 aa23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 YWHABP31946 246 aaKnown RBP23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 GTF2BQ00403 316 aa23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 AUHQ13825 339 aaKnown RBP23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 C6orf118Q5T5N4 469 aa23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 OTUD6AQ7L8S5 288 aa23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 FUKQ8N0W3 1084 aa23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 CPXCR1Q8N123 301 aa23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 TRIM7Q9C029 511 aa23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 DNAJC17Q9NVM6 304 aaKnown RBP23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 SYNPO2Q9UMS6 1093 aa23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 SCAF8Q9UPN6 1271 aaKnown RBP23.05■■□□□ 1.28
TSPAN17-207ENST00000508164 H0YIN7 160 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 RASGRF2O14827 1237 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 QARSP47897 775 aaKnown RBP23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 ADCY2Q08462 1091 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 PPP1R7Q15435 360 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 SNRNP35Q16560 246 aaKnown RBP23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 LONRF1Q17RB8 773 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 FAM102BQ5T8I3 360 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 C12orf56Q8IXR9 622 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 CCDC197Q8NCU1 140 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 SHC3Q92529 594 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 VEZTQ9HBM0 779 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 TMOD2Q9NZR1 351 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 CNOT7Q9UIV1 285 aaKnown RBP23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 MTUS1Q9ULD2 1270 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 MTA2O94776 668 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 CYP1A2P05177 515 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 MRPS9P82933 396 aaKnown RBP23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 CYP1B1Q16678 543 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 NBPF9Q3BBW0 867 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 TKFCQ3LXA3 575 aa23.04■■□□□ 1.28
TSPAN17-207ENST00000508164 CYB5D1Q6P9G0 228 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms