RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 ERP27Q96DN0 273 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 TEPSINQ96N21 525 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 ALG1Q9BT22 464 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 MS4A5Q9H3V2 200 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 KMT5AQ9NQR1 393 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 SPTLC3Q9NUV7 552 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 CACNA2D2Q9NY47 1150 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 MAD2L2Q9UI95 211 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 NAGPAQ9UK23 515 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 CFAP45Q9UL16 551 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 STX8Q9UNK0 236 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 DMTF1Q9Y222 760 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 CNTNAP5Q8WYK1 1306 aa7.9□□□□□ -1.15
CLCN3-206ENST00000507875 PARP14Q460N5 1801 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 SMIM22K7EJ46 135 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 MPHOSPH10O00566 681 aaKnown RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 BNIP3LO60238 219 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 H2AFYO75367 372 aaKnown RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 UBOX5O94941 541 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 CELF2O95319 508 aaKnown RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 HSPA1AP0DMV8 641 aaKnown RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 HSPA1BP0DMV9 641 aaKnown RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 BMP1P13497 986 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 KCNA2P16389 499 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 LPOP22079 712 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 CALML3P27482 149 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 GGCXP38435 758 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 CAP2P40123 477 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 CACNB3P54284 484 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 USP14P54578 494 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 SUMO1P63165 101 aaKnown RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 TNP2Q05952 138 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 TBC1D10BQ4KMP7 808 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 NOL9Q5SY16 702 aaKnown RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 CCDC148Q8NFR7 591 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 ABHD17AQ96GS6 310 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 ELAC2Q9BQ52 826 aaKnown RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 NAA15Q9BXJ9 866 aaKnown RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 SCAND2PQ9GZW5 306 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 GLT8D2Q9H1C3 349 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 TSPY26PQ9H489 355 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 CCDC86Q9H6F5 360 aaKnown RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 RIOX1Q9H6W3 641 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 C11orf16Q9NQ32 467 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 ZHX1Q9UKY1 873 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 ELP1O95163 1332 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 RBBP6Q7Z6E9 1792 aaKnown RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 IPO5O00410 1097 aaKnown RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 SOX1O00570 391 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 GRK4P32298 578 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 HTR3AP46098 478 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 ICA1Q05084 483 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 WASHC5Q12768 1159 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 RESTQ13127 1097 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 MAP7Q14244 749 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 PFKFB3Q16875 520 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 HEATR6Q6AI08 1181 aaKnown RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 SRLQ86TD4 932 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 SLC26A6Q9BXS9 759 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 GLIS2Q9BZE0 524 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 FOXP1Q9H334 677 aaPredicted RBP7.89□□□□□ -1.15
CLCN3-206ENST00000507875 TMX2Q9Y320 296 aa7.89□□□□□ -1.15
CLCN3-206ENST00000507875 ESYT2A0FGR8 921 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 TRAF5O00463 557 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 NMT2O60551 498 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 COQ9O75208 318 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 PDHBP11177 359 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 FGFR1P11362 822 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 PSMC1P62191 440 aaKnown RBP7.88□□□□□ -1.15
CLCN3-206ENST00000507875 ZNF543Q08ER8 600 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 TRIM14Q14142 442 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 MAPRE1Q15691 268 aaKnown RBP7.88□□□□□ -1.15
CLCN3-206ENST00000507875 CXorf57Q6NSI4 855 aaKnown RBP7.88□□□□□ -1.15
CLCN3-206ENST00000507875 BTNL9Q6UXG8 535 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 DAGLBQ8NCG7 672 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 RRP36Q96EU6 259 aaKnown RBP7.88□□□□□ -1.15
CLCN3-206ENST00000507875 HHIPL1Q96JK4 782 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 NELL2Q99435 816 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 KLHL25Q9H0H3 589 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 DEFB129Q9H1M3 183 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 YY1AP1Q9H869 796 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 OTOFQ9HC10 1997 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 C14orf119Q9NWQ9 140 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 CLIP2Q9UDT6 1046 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 LOC285556D6RIA3 1793 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 ANKRD34BA5PLL1 514 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 KLRF2D3W0D1 207 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 MMP1P03956 469 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 SCG2P13521 617 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 EEF2P13639 858 aaKnown RBP7.88□□□□□ -1.15
CLCN3-206ENST00000507875 U2AF2P26368 475 aaKnown RBP eCLIP7.88□□□□□ -1.157e-9■■■■□ 20.9
CLCN3-206ENST00000507875 ATICP31939 592 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 GUCY1A2P33402 732 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 PPM1FP49593 454 aaPredicted RBP7.88□□□□□ -1.15
CLCN3-206ENST00000507875 SEPT2Q15019 361 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 ANGEL2Q5VTE6 544 aaKnown RBP7.88□□□□□ -1.15
CLCN3-206ENST00000507875 KRT40Q6A162 431 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 FAM173BQ6P4H8 233 aa7.88□□□□□ -1.15
CLCN3-206ENST00000507875 ADAT2Q7Z6V5 191 aaKnown RBP7.88□□□□□ -1.15
CLCN3-206ENST00000507875 SRBD1Q8N5C6 995 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms