RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 GIT1Q9Y2X7 761 aa21.93■■□□□ 1.1
USP53-203ENST00000507597 SCN5AQ14524 2016 aa21.92■■□□□ 1.1
USP53-203ENST00000507597 SIP14410 1827 aa21.92■■□□□ 1.1
USP53-203ENST00000507597 A0A0B4J269 797 aa21.92■■□□□ 1.1
USP53-203ENST00000507597 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.92■■□□□ 1.1
USP53-203ENST00000507597 PRCPP42785 496 aa21.92■■□□□ 1.1
USP53-203ENST00000507597 KCNA1Q09470 495 aa21.92■■□□□ 1.1
USP53-203ENST00000507597 ZBTB33Q86T24 672 aa21.92■■□□□ 1.1
USP53-203ENST00000507597 TDHQ8IZJ6 230 aa21.92■■□□□ 1.1
USP53-203ENST00000507597 ADSSL1Q8N142 457 aa21.92■■□□□ 1.1
USP53-203ENST00000507597 GLIS3Q8NEA6 775 aa21.92■■□□□ 1.1
USP53-203ENST00000507597 ZBED2Q9BTP6 218 aa21.92■■□□□ 1.1
USP53-203ENST00000507597 CDT1Q9H211 546 aa21.92■■□□□ 1.1
USP53-203ENST00000507597 AGO2Q9UKV8 859 aaKnown RBP21.92■■□□□ 1.1
USP53-203ENST00000507597 MAPK8IP1Q9UQF2 711 aa21.92■■□□□ 1.1
USP53-203ENST00000507597 IPPQ9Y573 584 aa21.92■■□□□ 1.1
USP53-203ENST00000507597 A0A1W2PPC1 479 aa21.91■■□□□ 1.1
USP53-203ENST00000507597 FGFR1OPO95684 399 aaKnown RBP21.91■■□□□ 1.1
USP53-203ENST00000507597 HARSP12081 509 aaKnown RBP21.91■■□□□ 1.1
USP53-203ENST00000507597 ATP2A2P16615 1042 aaKnown RBP21.91■■□□□ 1.1
USP53-203ENST00000507597 CCNE1P24864 410 aa21.91■■□□□ 1.1
USP53-203ENST00000507597 GRM5P41594 1212 aa21.91■■□□□ 1.1
USP53-203ENST00000507597 LRRC63Q05C16 580 aa21.91■■□□□ 1.1
USP53-203ENST00000507597 SHHQ15465 462 aa21.91■■□□□ 1.1
USP53-203ENST00000507597 UBXN11Q5T124 520 aa21.91■■□□□ 1.1
USP53-203ENST00000507597 PRPF38BQ5VTL8 546 aaKnown RBP21.91■■□□□ 1.1
USP53-203ENST00000507597 EEF1DP3Q658K8 133 aa21.91■■□□□ 1.1
USP53-203ENST00000507597 CDR2LQ86X02 465 aaPredicted RBP21.91■■□□□ 1.1
USP53-203ENST00000507597 C12orf56Q8IXR9 622 aa21.91■■□□□ 1.1
USP53-203ENST00000507597 RNF169Q8NCN4 708 aa21.91■■□□□ 1.1
USP53-203ENST00000507597 LINC01599Q8WXQ3 324 aa21.91■■□□□ 1.1
USP53-203ENST00000507597 ACAP3Q96P50 834 aa21.91■■□□□ 1.1
USP53-203ENST00000507597 EIF2AQ9BY44 585 aaKnown RBP21.91■■□□□ 1.1
USP53-203ENST00000507597 PARP2Q9UGN5 583 aa21.91■■□□□ 1.1
USP53-203ENST00000507597 TRAF3IP3Q9Y228 551 aa21.91■■□□□ 1.1
USP53-203ENST00000507597 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.91■■□□□ 1.1
USP53-203ENST00000507597 ZMYM2Q9UBW7 1377 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 TTLL13PA6NNM8 815 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 ANKRD63C9JTQ0 380 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 UPP2O95045 317 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 EDN1P05305 212 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 CLTAP09496 248 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 CCDC192P0DO97 292 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 IBSPP21815 317 aaPredicted RBP21.9■■□□□ 1.1
USP53-203ENST00000507597 STX1AQ16623 288 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 NFIL3Q16649 462 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 EDRF1Q3B7T1 1238 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 RASIP1Q5U651 963 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 FOXR2Q6PJQ5 311 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 GLB1LQ6UWU2 654 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.9■■□□□ 1.1
USP53-203ENST00000507597 SLC9A9Q8IVB4 645 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 CD302Q8IX05 232 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 THNSL1Q8IYQ7 743 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 SMYD4Q8IYR2 804 aaPredicted RBP21.9■■□□□ 1.1
USP53-203ENST00000507597 URGCPQ8TCY9 931 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 TMEM174Q8WUU8 243 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 ZBTB45Q96K62 511 aaPredicted RBP21.9■■□□□ 1.1
USP53-203ENST00000507597 ANP32EQ9BTT0 268 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 NAT10Q9H0A0 1025 aaKnown RBP21.9■■□□□ 1.1
USP53-203ENST00000507597 KCTD10Q9H3F6 313 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 AGPAT3Q9NRZ7 376 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 KANSL3Q9P2N6 904 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 USP20Q9Y2K6 914 aa21.9■■□□□ 1.1
USP53-203ENST00000507597 CARNS1A5YM72 827 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 TGFB1I1O43294 461 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 PAK1Q13153 545 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 TCTN1Q2MV58 587 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 CENPPQ6IPU0 288 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 KLHL10Q6JEL2 608 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 CHRDL2Q6WN34 429 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 USP37Q86T82 979 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 GPD1LQ8N335 351 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 XXYLT1Q8NBI6 393 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 P2RX5Q93086 422 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 RPS6KC1Q96S38 1066 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 TSPAN18Q96SJ8 248 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 RPF1Q9H9Y2 349 aaKnown RBP21.89■■□□□ 1.09
USP53-203ENST00000507597 RSAD1Q9HA92 442 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 PLEKHA5Q9HAU0 1116 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 FRMD4BQ9Y2L6 1034 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 INSL6Q9Y581 213 aa21.89■■□□□ 1.09
USP53-203ENST00000507597 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.88■■□□□ 1.09
USP53-203ENST00000507597 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.88■■□□□ 1.09
USP53-203ENST00000507597 CETN3O15182 167 aa21.88■■□□□ 1.09
USP53-203ENST00000507597 EXTL3O43909 919 aa21.88■■□□□ 1.09
USP53-203ENST00000507597 EXOC3O60645 756 aa21.88■■□□□ 1.09
USP53-203ENST00000507597 ERCC5P28715 1186 aaPredicted RBP21.88■■□□□ 1.09
USP53-203ENST00000507597 FKBP3Q00688 224 aaKnown RBP21.88■■□□□ 1.09
USP53-203ENST00000507597 SURF1Q15526 300 aa21.88■■□□□ 1.09
USP53-203ENST00000507597 ZNF598Q86UK7 904 aaKnown RBP21.88■■□□□ 1.09
USP53-203ENST00000507597 YME1L1Q96TA2 773 aa21.88■■□□□ 1.09
USP53-203ENST00000507597 MRPL9Q9BYD2 267 aaKnown RBP21.88■■□□□ 1.09
USP53-203ENST00000507597 SNTG2Q9NY99 539 aa21.88■■□□□ 1.09
USP53-203ENST00000507597 HSPBP1Q9NZL4 362 aa21.88■■□□□ 1.09
USP53-203ENST00000507597 ZNF233A6NK53 670 aa21.87■■□□□ 1.09
USP53-203ENST00000507597 PPP1R3GB7ZBB8 358 aa21.87■■□□□ 1.09
USP53-203ENST00000507597 CLIC2O15247 247 aa21.87■■□□□ 1.09
USP53-203ENST00000507597 ADSSP30520 456 aa21.87■■□□□ 1.09
USP53-203ENST00000507597 HOXD13P35453 343 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms