RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 SAAL1Q96ER3 474 aa15.5■□□□□ 0.07
RNF4-208ENST00000507247 HTATIP2Q9BUP3 242 aa15.5■□□□□ 0.07
RNF4-208ENST00000507247 SRRTQ9BXP5 876 aaKnown RBP15.5■□□□□ 0.07
RNF4-208ENST00000507247 EIF2AQ9BY44 585 aaKnown RBP15.5■□□□□ 0.07
RNF4-208ENST00000507247 IFIH1Q9BYX4 1025 aaKnown RBP15.5■□□□□ 0.07
RNF4-208ENST00000507247 SAMSN1Q9NSI8 373 aaKnown RBP15.5■□□□□ 0.07
RNF4-208ENST00000507247 RALGAPA2Q2PPJ7 1873 aa15.5■□□□□ 0.07
RNF4-208ENST00000507247 TRIP11Q15643 1979 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 GOLGA8IPA6NC78 632 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 GOLGA8JA6NMD2 632 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 CLDN3O15551 220 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 FAM189A1O60320 539 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 PARNO95453 639 aaKnown RBP15.49■□□□□ 0.07
RNF4-208ENST00000507247 NPTXRO95502 500 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 RAG1P15918 1043 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 NCBP1Q09161 790 aaKnown RBP15.49■□□□□ 0.07
RNF4-208ENST00000507247 ADAM9Q13443 819 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 TPD52L1Q16890 204 aaPredicted RBP15.49■□□□□ 0.07
RNF4-208ENST00000507247 SEZ6Q53EL9 994 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 HSP90AA4PQ58FG1 418 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 ZBTB41Q5SVQ8 909 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 SLC27A1Q6PCB7 646 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 DEFB128Q7Z7B8 93 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 IRF2BP1Q8IU81 584 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 CEP120Q8N960 986 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 DBF4BQ8NFT6 615 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 TMEM174Q8WUU8 243 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 LINC01599Q8WXQ3 324 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 TCHPQ9BT92 498 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 MSTO1Q9BUK6 570 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 FANCLQ9NW38 375 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 AGO2Q9UKV8 859 aaKnown RBP15.49■□□□□ 0.07
RNF4-208ENST00000507247 CITO14578 2027 aa15.49■□□□□ 0.07
RNF4-208ENST00000507247 SMTNL1A8MU46 457 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 BECN2A8MW95 431 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 CETN3O15182 167 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 AKAP3O75969 853 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 ADRB2P07550 413 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 MCF2P10911 925 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 RPL13P26373 211 aaKnown RBP15.48■□□□□ 0.07
RNF4-208ENST00000507247 TNFSF9P41273 254 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 MYBPC2Q14324 1141 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 CEP135Q66GS9 1140 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 TWF2Q6IBS0 349 aaKnown RBP15.48■□□□□ 0.07
RNF4-208ENST00000507247 MFSD5Q6N075 450 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 CRELD2Q6UXH1 353 aaPredicted RBP15.48■□□□□ 0.07
RNF4-208ENST00000507247 RTN4RL1Q86UN2 441 aaPredicted RBP15.48■□□□□ 0.07
RNF4-208ENST00000507247 GPD1LQ8N335 351 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 XXYLT1Q8NBI6 393 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 CCDC51Q96ER9 411 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 FBXL18Q96ME1 805 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 CEP63Q96MT8 703 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 ADPGKQ9BRR6 497 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 CHST12Q9NRB3 414 aa15.48■□□□□ 0.07
RNF4-208ENST00000507247 KIAA0391O15091 583 aaKnown RBP15.47■□□□□ 0.07
RNF4-208ENST00000507247 OGTO15294 1046 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 EVI5O60447 810 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 EXOC3O60645 756 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 CSF2RAP15509 400 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 SYN1P17600 705 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 RFC2P35250 354 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 ACOT2P49753 483 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 PDCD11Q14690 1871 aaKnown RBP15.47■□□□□ 0.07
RNF4-208ENST00000507247 DCAF4L1Q3SXM0 396 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 CDKAL1Q5VV42 579 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 FILIP1Q7Z7B0 1213 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 CBWD2Q8IUF1 395 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 TMEM192Q8IY95 271 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 THNSL1Q8IYQ7 743 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 RDH13Q8NBN7 331 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 SMG8Q8ND04 991 aaKnown RBP15.47■□□□□ 0.07
RNF4-208ENST00000507247 NOC3LQ8WTT2 800 aaKnown RBP15.47■□□□□ 0.07
RNF4-208ENST00000507247 SEPT8Q92599 483 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 ADAM2Q99965 735 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 THAP9Q9H5L6 903 aa15.47■□□□□ 0.07
RNF4-208ENST00000507247 EXTL3O43909 919 aa15.46■□□□□ 0.07
RNF4-208ENST00000507247 ZNF18P17022 549 aa15.46■□□□□ 0.07
RNF4-208ENST00000507247 ZSCAN20P17040 1043 aaPredicted RBP15.46■□□□□ 0.07
RNF4-208ENST00000507247 OSTNP61366 133 aa15.46■□□□□ 0.07
RNF4-208ENST00000507247 TMEM199Q8N511 208 aa15.46■□□□□ 0.07
RNF4-208ENST00000507247 APBB2Q92870 758 aa15.46■□□□□ 0.07
RNF4-208ENST00000507247 BADQ92934 168 aa15.46■□□□□ 0.07
RNF4-208ENST00000507247 CNOT6LQ96LI5 555 aaKnown RBP15.46■□□□□ 0.07
RNF4-208ENST00000507247 FAM213AQ9BRX8 229 aa15.46■□□□□ 0.07
RNF4-208ENST00000507247 MKNK1Q9BUB5 465 aa15.46■□□□□ 0.07
RNF4-208ENST00000507247 NXF3Q9H4D5 531 aaKnown RBP15.46■□□□□ 0.07
RNF4-208ENST00000507247 FAM105AQ9NUU6 356 aa15.46■□□□□ 0.07
RNF4-208ENST00000507247 PRKAG2Q9UGJ0 569 aa15.46■□□□□ 0.07
RNF4-208ENST00000507247 CPSF3Q9UKF6 684 aaKnown RBP15.46■□□□□ 0.07
RNF4-208ENST00000507247 ZMYND8Q9ULU4 1186 aaPredicted RBP15.46■□□□□ 0.07
RNF4-208ENST00000507247 HES2Q9Y543 173 aa15.46■□□□□ 0.07
RNF4-208ENST00000507247 IPPQ9Y573 584 aa15.46■□□□□ 0.07
RNF4-208ENST00000507247 PTPRSQ13332 1948 aa15.45■□□□□ 0.06
RNF4-208ENST00000507247 H0YGN5 161 aa15.45■□□□□ 0.06
RNF4-208ENST00000507247 SLC16A3O15427 465 aaKnown RBP15.45■□□□□ 0.06
RNF4-208ENST00000507247 MEFVO15553 781 aaPredicted RBP15.45■□□□□ 0.06
RNF4-208ENST00000507247 FGFR1OPO95684 399 aaKnown RBP15.45■□□□□ 0.06
RNF4-208ENST00000507247 LDHAP00338 332 aaKnown RBP15.45■□□□□ 0.06
RNF4-208ENST00000507247 EPB41P11171 864 aaKnown RBP15.45■□□□□ 0.06
RNF4-208ENST00000507247 ATP1A3P13637 1013 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms