RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 CLDN3O15551 220 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 FAM189A1O60320 539 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 OFD1O75665 1012 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 UPP2O95045 317 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 SMC2O95347 1197 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 NPTXRO95502 500 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 LINC00271P0C7V0 271 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 ITGA4P13612 1032 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 HOXD13P35453 343 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 PBX2P40425 430 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 GRM5P41594 1212 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 LIG4P49917 911 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 RABGGTBP53611 331 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 KCNA1Q09470 495 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 STK4Q13043 487 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 PNOCQ13519 176 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 NOLC1Q14978 699 aaKnown RBP eCLIP10.65□□□□□ -0.7
SFXN1-205ENST00000506963 ZNF568Q3ZCX4 644 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 TPRNQ4KMQ1 711 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 COBLL1Q53SF7 1204 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 XKR4Q5GH76 650 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 SLFN12LQ6IEE8 588 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 CDR2LQ86X02 465 aaPredicted RBP10.65□□□□□ -0.7
SFXN1-205ENST00000506963 KIAA0895Q8NCT3 520 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 GLIS3Q8NEA6 775 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 CLP1Q92989 425 aaKnown RBP10.65□□□□□ -0.7
SFXN1-205ENST00000506963 HPS3Q969F9 1004 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 CASD1Q96PB1 797 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 MRPL9Q9BYD2 267 aaKnown RBP10.65□□□□□ -0.7
SFXN1-205ENST00000506963 TRIM6Q9C030 488 aaPredicted RBP10.65□□□□□ -0.7
SFXN1-205ENST00000506963 NXF3Q9H4D5 531 aaKnown RBP10.65□□□□□ -0.7
SFXN1-205ENST00000506963 RSAD1Q9HA92 442 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 RMND1Q9NWS8 449 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 CGNQ9P2M7 1197 aaKnown RBP10.65□□□□□ -0.7
SFXN1-205ENST00000506963 PCDHA5Q9Y5H7 936 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 RALGAPA2Q2PPJ7 1873 aa10.65□□□□□ -0.7
SFXN1-205ENST00000506963 CITO14578 2027 aa10.65□□□□□ -0.71
SFXN1-205ENST00000506963 MYO9BQ13459 2157 aa10.65□□□□□ -0.71
SFXN1-205ENST00000506963 LCHNA4D1U4 455 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 LINC01553A4QN01 128 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 CARNS1A5YM72 827 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 MEIS3P2A8K0S8 358 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 KIAA0391O15091 583 aaKnown RBP10.64□□□□□ -0.71
SFXN1-205ENST00000506963 PRPF6O94906 941 aaKnown RBP10.64□□□□□ -0.71
SFXN1-205ENST00000506963 CA3P07451 260 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 ADRB2P07550 413 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 FGFR1P11362 822 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 GARTP22102 1010 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 ADSSP30520 456 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 FXR1P51114 621 aaKnown RBP eCLIP10.64□□□□□ -0.71
SFXN1-205ENST00000506963 ERVK-21P61565 698 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 TAP1Q03518 808 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 TMEM132AQ24JP5 1023 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 FAM117BQ6P1L5 589 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 GLB1LQ6UWU2 654 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 ALKAL1Q6UXT8 129 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 C12orf56Q8IXR9 622 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 LRRC43Q8N309 656 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 GSTCDQ8NEC7 633 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 TIFAQ96CG3 184 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 BICD1Q96G01 975 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 ZBTB45Q96K62 511 aaPredicted RBP10.64□□□□□ -0.71
SFXN1-205ENST00000506963 SAMD11Q96NU1 681 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 HAPLN2Q9GZV7 340 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 SLC28A3Q9HAS3 691 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 SLC39A2Q9NP94 309 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 KANSL3Q9P2N6 904 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 RWDD3Q9Y3V2 267 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 HES2Q9Y543 173 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 NLRC5Q86WI3 1866 aa10.64□□□□□ -0.71
SFXN1-205ENST00000506963 LAMA3Q16787 3333 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 TRIP11Q15643 1979 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.63□□□□□ -0.71
SFXN1-205ENST00000506963 ANKRD63C9JTQ0 380 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 C5orf67F2Z3F1 127 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 OGTO15294 1046 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 TGFB1I1O43294 461 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 ARHGEF15O94989 841 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 KIF20AO95235 890 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 MBD3O95983 291 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 CLTAP09496 248 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 MYOGP15173 224 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 MCM4P33991 863 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 GATMP50440 423 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 BTG3Q14201 252 aaPredicted RBP10.63□□□□□ -0.71
SFXN1-205ENST00000506963 KNOP1Q1ED39 458 aaKnown RBP10.63□□□□□ -0.71
SFXN1-205ENST00000506963 NOMO2Q5JPE7 1267 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 ZNF658Q5TYW1 1059 aaPredicted RBP10.63□□□□□ -0.71
SFXN1-205ENST00000506963 LRRC55Q6ZSA7 311 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 ABI1Q8IZP0 508 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 GUF1Q8N442 669 aaKnown RBP10.63□□□□□ -0.71
SFXN1-205ENST00000506963 FIBCD1Q8N539 461 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 RNF169Q8NCN4 708 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 GOLGA5Q8TBA6 731 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 GPT2Q8TD30 523 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 HELQQ8TDG4 1101 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 LPPQ93052 612 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 SMARCE1Q969G3 411 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 LRCH3Q96II8 777 aa10.63□□□□□ -0.71
SFXN1-205ENST00000506963 TSPAN18Q96SJ8 248 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms