RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ANKFY1Q9P2R3 1169 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 PRKAB1Q9Y478 270 aa3.75□□□□□ -1.81
TOPBP1-205ENST00000506779 MYPNQ86TC9 1320 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 CENPVL1A0A0U1RR11 272 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 SERINC4A6NH21 518 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 ZNF891A8MT65 544 aaPredicted RBP3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 PRR5-ARHGAP8B1AHC4 643 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 RNASET2O00584 256 aaKnown RBP3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 LPXNO60711 386 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 CFBP00751 764 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 MYCLP1P12525 358 aaPredicted RBP3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 HSP90B1P14625 803 aaKnown RBP3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 AVPR1BP47901 424 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 MASP1P48740 699 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 TAP1Q03518 808 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 PCBP1Q15365 356 aaKnown RBP eCLIP3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 METTL24Q5JXM2 366 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 SP5Q6BEB4 398 aaPredicted RBP3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 FBXO42Q6P3S6 717 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 LMBR1LQ6UX01 489 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 Q6YL49 198 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 ESPNLQ6ZVH7 1005 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 GDF7Q7Z4P5 450 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 AFAP1L2Q8N4X5 818 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 MYEOVQ96EZ4 313 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 DCLRE1CQ96SD1 692 aaKnown RBP3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 SOX7Q9BT81 388 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 FAM126AQ9BYI3 521 aaPredicted RBP3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 IFT57Q9NWB7 429 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 USP18Q9UMW8 372 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 MAPRE3Q9UPY8 281 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 CLCA2Q9UQC9 943 aa3.74□□□□□ -1.81
TOPBP1-205ENST00000506779 POLR2AP24928 1970 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 AHRRA9YTQ3 701 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 NRP2O60462 931 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 NCR1O76036 304 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 ZFPL1O95159 310 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 LY86O95711 162 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 CBSLP0DN79 551 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 ZFP36P26651 326 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 CBSP35520 551 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 GZMKP49863 264 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 NRG3P56975 720 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 CD69Q07108 199 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 MRPL49Q13405 166 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 TAF7LQ5H9L4 462 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 CNNM4Q6P4Q7 775 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 DOK3Q7L591 496 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 KRT26Q7Z3Y9 468 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 XYLT1Q86Y38 959 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 PLXDC1Q8IUK5 500 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 CMTR2Q8IYT2 770 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 CAVIN3Q969G5 261 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 LSM14BQ9BX40 385 aaKnown RBP3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 ADGRE3Q9BY15 652 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 WDR11Q9BZH6 1224 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 SERHL2Q9H4I8 314 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 ZMAT4Q9H898 229 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 SPON1Q9HCB6 807 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 AKIP1Q9NQ31 210 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 H2AFY2Q9P0M6 372 aaPredicted RBP3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 MSRAQ9UJ68 235 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 ABCC9O60706 1549 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 SBNO2Q9Y2G9 1366 aa3.73□□□□□ -1.81
TOPBP1-205ENST00000506779 NACADO15069 1562 aa3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 DNAJC9-AS1A6NH13 148 aa3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 KCNAB3O43448 404 aa3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 NDUFA10O95299 355 aa3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 F2P00734 622 aa3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 SPATA31D3P0C874 917 aa3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 ATP2A2P16615 1042 aaKnown RBP3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 ZEB1P37275 1124 aaPredicted RBP3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 RNASE9P60153 205 aaKnown RBP3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 FAM189BP81408 668 aa3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 MGAT5Q09328 741 aa3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 ERCC6LQ2NKX8 1250 aa3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 SPATA31D4Q6ZUB0 917 aa3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 KIF18BQ86Y91 864 aa3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 EFHBQ8N7U6 833 aa3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 ANKS1AQ92625 1134 aa3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 ENKD1Q9H0I2 346 aa3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 SLKQ9H2G2 1235 aaPredicted RBP3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 USP36Q9P275 1121 aaKnown RBP3.72□□□□□ -1.81
TOPBP1-205ENST00000506779 GAGE12BA1L429 117 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 GAGE12HA6NDE8 117 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 ELL2O00472 640 aaPredicted RBP3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 PRAMEF4O60810 478 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 BPIP17213 487 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 ADCYAP1R1P41586 468 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 GPR15P49685 360 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 NEK4P51957 841 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 PTTG1IPP53801 180 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 MXRA7P84157 204 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 GUCY1B3Q02153 619 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 NHLH2Q02577 135 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 PPARAQ07869 468 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 FOXF2Q12947 444 aa3.71□□□□□ -1.82
TOPBP1-205ENST00000506779 LRRC32Q14392 662 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms