RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 DDX20Q9UHI6 824 aaKnown RBP13.06□□□□□ -0.32
POLR2J3-211ENST00000506060 TNFSF13BQ9Y275 285 aa13.06□□□□□ -0.32
POLR2J3-211ENST00000506060 M0QZ92 97 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 KIF2AO00139 706 aaPredicted RBP13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 PGK1P00558 417 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 TUBB4AP04350 444 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 ADRB2P07550 413 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 TRIM49P0CI25 452 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 TRIM49CP0CI26 452 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 PON1P27169 355 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 HNRNPH3P31942 346 aaKnown RBP13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 KLK7P49862 253 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 NLRP11P59045 1033 aaKnown RBP13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 POLR2FP61218 127 aaKnown RBP13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 GOLGA8FQ08AF8 430 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 GOLGA8DPQ0D2H9 430 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 MEA1Q16626 185 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 ZNF568Q3ZCX4 644 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 KLHDC7AQ5VTJ3 777 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 SFMBT2Q5VUG0 894 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 PDXDC1Q6P996 788 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 RRAGAQ7L523 313 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 CCDC170Q8IYT3 715 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 TXLNBQ8N3L3 684 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 EHBP1Q8NDI1 1231 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 ZNF296Q8WUU4 475 aaPredicted RBP13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 CCDC127Q96BQ5 260 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 FAM49AQ9H0Q0 323 aaPredicted RBP13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 IFT122Q9HBG6 1241 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 HMX1Q9NP08 348 aaPredicted RBP13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 SPTLC3Q9NUV7 552 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 RBAKQ9NYW8 714 aaPredicted RBP13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 PLAGL2Q9UPG8 496 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 BZW2Q9Y6E2 419 aaKnown RBP13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 CNTNAP2Q9UHC6 1331 aa13.05□□□□□ -0.32
POLR2J3-211ENST00000506060 SCN10AQ9Y5Y9 1956 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 TULP1O00294 542 aaPredicted RBP13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 ADAMTS4O75173 837 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 IL18RAPO95256 599 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 GJB1P08034 283 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 CCDC175P0C221 793 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 MCF2P10911 925 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 UCHL3P15374 230 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 CCND3P30281 292 aaPredicted RBP13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 AXLP30530 894 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 GRK4P32298 578 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 GCLMP48507 274 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 ADAM17P78536 824 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 SLC9C1Q4G0N8 1177 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 TRIM65Q6PJ69 517 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 TMEM139Q8IV31 216 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 CCDC155Q8N6L0 562 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 KLHDC9Q8NEP7 349 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 TSEN34Q9BSV6 310 aaKnown RBP13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 INTS2Q9H0H0 1204 aaKnown RBP13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 GANQ9H2C0 597 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 LUC7LQ9NQ29 371 aaKnown RBP13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 AGPAT5Q9NUQ2 364 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 HDAC6Q9UBN7 1215 aa13.04□□□□□ -0.32
POLR2J3-211ENST00000506060 MOXD2PA6NHM9 499 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 LRRIQ3A6PVS8 624 aaPredicted RBP13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 ZC3H11AO75152 810 aaKnown RBP eCLIP13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 CLTAP09496 248 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 DLATP10515 647 aaKnown RBP13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 HARSP12081 509 aaKnown RBP13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 TNNI1P19237 187 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 SLC9A1P19634 815 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 PROZP22891 400 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 HOXC8P31273 242 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 CLCN1P35523 988 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 KRT83P78385 493 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 PTPN11Q06124 597 aaPredicted RBP13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 TRIM32Q13049 653 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 RAPGEF1Q13905 1077 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 KCNA10Q16322 511 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 NBPF20Q3BBV1 942 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 DCAF4L1Q3SXM0 396 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 CXCL17Q6UXB2 119 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 CATSPER4Q7RTX7 472 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 ZBTB33Q86T24 672 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 VPS36Q86VN1 386 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 SESTD1Q86VW0 696 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 BRSK2Q8IWQ3 736 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 CCAR2Q8N163 923 aaKnown RBP13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 ARRDC4Q8NCT1 418 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 FBXL13Q8NEE6 735 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 ZBTB45Q96K62 511 aaPredicted RBP13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 CCDC42Q96M95 316 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 CGRRF1Q99675 332 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 SEZ6LQ9BYH1 1024 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 DEF6Q9H4E7 631 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 NLRC4Q9NPP4 1024 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 APEX2Q9UBZ4 518 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 GTF2IRD1Q9UHL9 959 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 USP20Q9Y2K6 914 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 COQ4Q9Y3A0 265 aa13.03□□□□□ -0.32
POLR2J3-211ENST00000506060 MYADML2A6NDP7 307 aa13.02□□□□□ -0.33
POLR2J3-211ENST00000506060 LRRC53A6NM62 1247 aa13.02□□□□□ -0.33
POLR2J3-211ENST00000506060 TREHO43280 583 aa13.02□□□□□ -0.33
POLR2J3-211ENST00000506060 NOL4O94818 638 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms