RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 ZNF564Q8TBZ8 553 aaPredicted RBP8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 CLEC4DQ8WXI8 215 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 TAAR1Q96RJ0 339 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 EPB41L4BQ9H329 900 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 GRHL1Q9NZI5 618 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 NOCTQ9UK39 431 aaKnown RBP8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 PFASO15067 1338 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 TESPA1A2RU30 521 aaPredicted RBP8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 PODXLO00592 558 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 PLSCR1O15162 318 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 PLA2G6O60733 806 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 DLATP10515 647 aaKnown RBP8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 CYP11B1P15538 503 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 FGFR4P22455 802 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 CTNNA2P26232 953 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 CNGA1P29973 690 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 SOX10P56693 466 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 IFI35P80217 286 aaPredicted RBP8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 SPDYE2Q495Y8 402 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 CCDC121Q6ZUS5 278 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 YTHDF3Q7Z739 585 aaKnown RBP8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 PHLDB2Q86SQ0 1253 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 HOOK3Q86VS8 718 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 PRPF38AQ8NAV1 312 aaKnown RBP8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 SUPT20HQ8NEM7 779 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 ZNF653Q96CK0 615 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 SEC16BQ96JE7 1060 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 RPS6KC1Q96S38 1066 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 SELENOSQ9BQE4 189 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 PAGR1Q9BTK6 254 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 AZI2Q9H6S1 392 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 ZNF277Q9NRM2 450 aaPredicted RBP8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 TOPORSQ9NS56 1045 aaPredicted RBP8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 PCYOX1Q9UHG3 505 aa8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 RBBP6Q7Z6E9 1792 aaKnown RBP8.19□□□□□ -1.1
PPARGC1A-204ENST00000506055 GOLGA6L7A0A1B0GV03 622 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 SRRM3A6NNA2 597 aaPredicted RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 RGS16O15492 202 aaPredicted RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 CTNND1O60716 968 aaKnown RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 ATP2C2O75185 946 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 FSBPO95073 299 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 MAPTP10636 758 aaKnown RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 GZMAP12544 262 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 KRT5P13647 590 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 FNTAP49354 379 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 GTF2A1P52655 376 aaPredicted RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 SMTNP53814 917 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 DRG2P55039 364 aaKnown RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 FMO1Q01740 532 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 SNX1Q13596 522 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 BYSLQ13895 437 aaKnown RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 PCNX4Q63HM2 1172 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 KRT39Q6A163 491 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 MCF2L2Q86YR7 1114 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 LARGE2Q8N3Y3 721 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 FBXO41Q8TF61 875 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 DHX38Q92620 1227 aaKnown RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 TLCD1Q96CP7 247 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 FAM84AQ96KN4 292 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 WNT8AQ9H1J5 351 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 MTUS1Q9ULD2 1270 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 TBX20Q9UMR3 447 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 RPTORQ8N122 1335 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 ATXN2Q99700 1313 aaKnown RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 DENND3A2RUS2 1198 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 CLDN3O15551 220 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 ASNSP08243 561 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 RARAP10276 462 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 CHN1P15882 459 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 NPTX2P47972 431 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 PDE6CP51160 858 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 CDR1P51861 262 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 MNAT1P51948 309 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 RPS6P62753 249 aaKnown RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 PPP1R7Q15435 360 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 GKAP1Q5VSY0 366 aaPredicted RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 KCNV1Q6PIU1 500 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 C6orf89Q6UWU4 347 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 SLC13A5Q86YT5 568 aaPredicted RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 C12orf56Q8IXR9 622 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 CCDC13Q8IYE1 715 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 CACNA2D3Q8IZS8 1091 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 SYTL5Q8TDW5 730 aaPredicted RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 TAS1R2Q8TE23 839 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 PARD3BQ8TEW8 1205 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 CD101Q93033 1021 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 TATDN2Q93075 761 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 VTI1AQ96AJ9 217 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 PI4K2AQ9BTU6 479 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 CCDC113Q9H0I3 377 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 CNOT10Q9H9A5 744 aaKnown RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 TBC1D22BQ9NU19 505 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 MTRF1LQ9UGC7 380 aaKnown RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 PCDHA3Q9Y5H8 950 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 UBIAD1Q9Y5Z9 338 aa8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 ASTN2O75129 1339 aaPredicted RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 COL2A1P02458 1487 aaPredicted RBP8.18□□□□□ -1.1
PPARGC1A-204ENST00000506055 CCNE2O96020 404 aa8.17□□□□□ -1.1
PPARGC1A-204ENST00000506055 NUDT17P0C025 328 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms