RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 OLFML2BQ68BL8 750 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 CDCA2Q69YH5 1023 aaPredicted RBP8.74□□□□□ -1.01
COL4A5-208ENST00000505728 IQCEQ6IPM2 695 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 ZPBP2Q6X784 338 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 IRF2BP2Q7Z5L9 587 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 CBWD2Q8IUF1 395 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 ZBTB8OSQ8IWT0 167 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 LMO3Q8TAP4 145 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 PLEKHO2Q8TD55 490 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 AFG1LQ8WV93 481 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 JAKMIP2Q96AA8 810 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 FAM81BQ96LP2 452 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 TMEM106CQ9BVX2 250 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 INTS2Q9H0H0 1204 aaKnown RBP8.74□□□□□ -1.01
COL4A5-208ENST00000505728 SUGCTQ9HAC7 445 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 TMEM8AQ9HCN3 771 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 SUCLA2Q9P2R7 463 aaPredicted RBP8.74□□□□□ -1.01
COL4A5-208ENST00000505728 DNAJC12Q9UKB3 198 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 AGO2Q9UKV8 859 aaKnown RBP8.74□□□□□ -1.01
COL4A5-208ENST00000505728 ZHX1Q9UKY1 873 aaPredicted RBP8.74□□□□□ -1.01
COL4A5-208ENST00000505728 ZNF215Q9UL58 517 aaPredicted RBP8.74□□□□□ -1.01
COL4A5-208ENST00000505728 COQ4Q9Y3A0 265 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 PCDHA13Q9Y5I0 950 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 SIP14410 1827 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 ALPK3Q96L96 1907 aa8.74□□□□□ -1.01
COL4A5-208ENST00000505728 A0A0B4J269 797 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 DYNC1I1O14576 645 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 CTIFO43310 598 aaKnown RBP8.73□□□□□ -1.01
COL4A5-208ENST00000505728 PLEKP08567 350 aaPredicted RBP8.73□□□□□ -1.01
COL4A5-208ENST00000505728 INSRRP14616 1297 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 TMOD1P28289 359 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 SOX5P35711 763 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 MAGEA1P43355 309 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 GCLMP48507 274 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 MXI1P50539 228 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 DLG4P78352 724 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 TNFAIP2Q03169 654 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 DRAP1Q14919 205 aaPredicted RBP8.73□□□□□ -1.01
COL4A5-208ENST00000505728 PSMD6Q15008 389 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 DGKDQ16760 1214 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 CCDC122Q5T0U0 273 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 TMEM63BQ5T3F8 832 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 KRT39Q6A163 491 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 EFCAB12Q6NXP0 572 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 VPS36Q86VN1 386 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 TRIM50Q86XT4 487 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 IFNLR1Q8IU57 520 aaPredicted RBP8.73□□□□□ -1.01
COL4A5-208ENST00000505728 ZSWIM2Q8NEG5 633 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 OR6J1Q8NGC5 347 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 SOCS4Q8WXH5 440 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 SAAL1Q96ER3 474 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 WDR24Q96S15 920 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 C16orf70Q9BSU1 422 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 TARS2Q9BW92 718 aaKnown RBP8.73□□□□□ -1.01
COL4A5-208ENST00000505728 MRPL4Q9BYD3 311 aaKnown RBP8.73□□□□□ -1.01
COL4A5-208ENST00000505728 NFKBIZQ9BYH8 718 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 TMEM117Q9H0C3 514 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 RNPEPQ9H4A4 650 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 APEX2Q9UBZ4 518 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 Q9Y3F1 56 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 LAMA3Q16787 3333 aa8.73□□□□□ -1.01
COL4A5-208ENST00000505728 A0A0U1RQJ8 604 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.72□□□□□ -1.01
COL4A5-208ENST00000505728 CTAGE9A4FU28 777 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 RRN3P2A6NIE6 340 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 LRRIQ3A6PVS8 624 aaPredicted RBP8.72□□□□□ -1.01
COL4A5-208ENST00000505728 H3BRB1 525 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 ACKR2O00590 384 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 ZNF263O14978 683 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 MSCO60682 206 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 ZC3H11AO75152 810 aaKnown RBP eCLIP8.72□□□□□ -1.01
COL4A5-208ENST00000505728 TOM1L1O75674 476 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 URI1O94763 535 aaPredicted RBP8.72□□□□□ -1.01
COL4A5-208ENST00000505728 SLU7O95391 586 aaKnown RBP8.72□□□□□ -1.01
COL4A5-208ENST00000505728 C22orf31O95567 290 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 PRKCBP05771 671 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 MMP3P08254 477 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 SRGAP2CP0DJJ0 459 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 KLRC1P26715 233 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 GPC3P51654 580 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 AP3M2P53677 418 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 PTENP60484 403 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 CLDN10P78369 228 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 CDC42EP1Q00587 391 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 CYP27A1Q02318 531 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 APBA1Q02410 837 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 DRP2Q13474 957 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 KIF22Q14807 665 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 ARHGEF6Q15052 776 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 MTFR1Q15390 333 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 SURF1Q15526 300 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 SLC18A3Q16572 532 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 MAPK6Q16659 721 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 GJC2Q5T442 439 aaPredicted RBP8.72□□□□□ -1.01
COL4A5-208ENST00000505728 SMYD5Q6GMV2 418 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 SLC35F6Q8N357 371 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 LRRC71Q8N4P6 559 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 RNF10Q8N5U6 811 aaKnown RBP8.72□□□□□ -1.01
COL4A5-208ENST00000505728 LINC01465Q8N7H1 131 aa8.72□□□□□ -1.01
COL4A5-208ENST00000505728 RNF149Q8NC42 400 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms