RNA–Protein interactions for RNA: ENST00000505081.5

DDX41-205, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,949 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-205ENST00000505081 COILP38432 576 aaPredicted RBP17.21■□□□□ 0.35
DDX41-205ENST00000505081 SNX1Q13596 522 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 RASA3Q14644 834 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 SIX1Q15475 284 aaPredicted RBP17.21■□□□□ 0.35
DDX41-205ENST00000505081 SLC13A5Q86YT5 568 aaPredicted RBP17.21■□□□□ 0.35
DDX41-205ENST00000505081 CPXCR1Q8N123 301 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 C1orf54Q8WWF1 131 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 TMEM206Q9H813 350 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 EHMT1Q9H9B1 1298 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 VEZTQ9HBM0 779 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 DNAJC17Q9NVM6 304 aaKnown RBP17.21■□□□□ 0.35
DDX41-205ENST00000505081 PCYOX1Q9UHG3 505 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 ZNF646O15015 1829 aaPredicted RBP17.21■□□□□ 0.35
DDX41-205ENST00000505081 CLDN3O15551 220 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 RASSF9O75901 435 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 P4HBP07237 508 aaKnown RBP17.21■□□□□ 0.35
DDX41-205ENST00000505081 PLS3P13797 630 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 IBSPP21815 317 aaPredicted RBP17.21■□□□□ 0.35
DDX41-205ENST00000505081 MUTP22033 750 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 RFX1P22670 979 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 SOX10P56693 466 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 FAM71AQ8IYT1 594 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 ZNF317Q96PQ6 595 aaPredicted RBP17.21■□□□□ 0.35
DDX41-205ENST00000505081 RIT2Q99578 217 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 PRMT1Q99873 361 aaKnown RBP17.21■□□□□ 0.35
DDX41-205ENST00000505081 DDX23Q9BUQ8 820 aaKnown RBP17.21■□□□□ 0.35
DDX41-205ENST00000505081 TRIM7Q9C029 511 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 TMEM39BQ9GZU3 492 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 CNOT10Q9H9A5 744 aaKnown RBP17.21■□□□□ 0.35
DDX41-205ENST00000505081 HERC5Q9UII4 1024 aaKnown RBP17.21■□□□□ 0.35
DDX41-205ENST00000505081 TRPC5Q9UL62 973 aaPredicted RBP17.21■□□□□ 0.35
DDX41-205ENST00000505081 CCPG1Q9ULG6 757 aa17.21■□□□□ 0.35
DDX41-205ENST00000505081 ADSSP30520 456 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 MMP13P45452 471 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 SMTNP53814 917 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 DRG2P55039 364 aaKnown RBP17.2■□□□□ 0.34
DDX41-205ENST00000505081 C2CD6Q53TS8 623 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 LLGL2Q6P1M3 1020 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 LRRC34Q8IZ02 419 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 CEP89Q96ST8 783 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 PFASO15067 1338 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 CCDC169A6NNP5 214 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 RIPK2O43353 540 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 ALAS1P13196 640 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 SCTRP47872 440 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 DAB2IPQ5VWQ8 1189 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 FMNL3Q8IVF7 1028 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 IPO4Q8TEX9 1081 aaKnown RBP17.2■□□□□ 0.34
DDX41-205ENST00000505081 PGM2Q96G03 612 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 RPS6KC1Q96S38 1066 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.2■□□□□ 0.34
DDX41-205ENST00000505081 ZBTB12Q9Y330 459 aaPredicted RBP17.2■□□□□ 0.34
DDX41-205ENST00000505081 RAD17O75943 681 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 MRPS9P82933 396 aaKnown RBP17.2■□□□□ 0.34
DDX41-205ENST00000505081 FAM102BQ5T8I3 360 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 OTUD6AQ7L8S5 288 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 KRT27Q7Z3Y8 459 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 C3orf20Q8ND61 904 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 ATG4AQ8WYN0 398 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 CCT6BQ92526 530 aa17.2■□□□□ 0.34
DDX41-205ENST00000505081 H0YIN7 160 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 CYP11B1P15538 503 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 CREB1P16220 341 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 YWHABP31946 246 aaKnown RBP17.19■□□□□ 0.34
DDX41-205ENST00000505081 MYBPC2Q14324 1141 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 TRIP13Q15645 432 aaPredicted RBP17.19■□□□□ 0.34
DDX41-205ENST00000505081 SPDYCQ5MJ68 293 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 RNF207Q6ZRF8 634 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 PI4K2AQ9BTU6 479 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 WNT8AQ9H1J5 351 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 QTRT2Q9H974 415 aaKnown RBP17.19■□□□□ 0.34
DDX41-205ENST00000505081 ZNF70Q9UC06 446 aaPredicted RBP17.19■□□□□ 0.34
DDX41-205ENST00000505081 MTRF1LQ9UGC7 380 aaKnown RBP17.19■□□□□ 0.34
DDX41-205ENST00000505081 ZNF536O15090 1300 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 SPDYE2BA6NHP3 402 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 PPIP5K2O43314 1243 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 SPDYE6P0CI01 402 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 EIF2AK2P19525 551 aaKnown RBP17.19■□□□□ 0.34
DDX41-205ENST00000505081 TRAF1Q13077 416 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 LRRC14Q15048 493 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 SNRNP35Q16560 246 aaKnown RBP17.19■□□□□ 0.34
DDX41-205ENST00000505081 LONRF1Q17RB8 773 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 TKFCQ3LXA3 575 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 TAS1R2Q8TE23 839 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 HVCN1Q96D96 273 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 HERPUD2Q9BSE4 406 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 TMOD2Q9NZR1 351 aa17.19■□□□□ 0.34
DDX41-205ENST00000505081 PODXLO00592 558 aa17.18■□□□□ 0.34
DDX41-205ENST00000505081 ATP9AO75110 1047 aa17.18■□□□□ 0.34
DDX41-205ENST00000505081 ACSL3O95573 720 aa17.18■□□□□ 0.34
DDX41-205ENST00000505081 QARSP47897 775 aaKnown RBP17.18■□□□□ 0.34
DDX41-205ENST00000505081 GTF2BQ00403 316 aa17.18■□□□□ 0.34
DDX41-205ENST00000505081 AUHQ13825 339 aaKnown RBP17.18■□□□□ 0.34
DDX41-205ENST00000505081 SWT1Q5T5J6 900 aaKnown RBP17.18■□□□□ 0.34
DDX41-205ENST00000505081 MGARPQ8TDB4 240 aa17.18■□□□□ 0.34
DDX41-205ENST00000505081 PWWP2AQ96N64 755 aa17.18■□□□□ 0.34
DDX41-205ENST00000505081 AGO4Q9HCK5 861 aaKnown RBP17.18■□□□□ 0.34
DDX41-205ENST00000505081 INTS9Q9NV88 658 aaKnown RBP17.18■□□□□ 0.34
DDX41-205ENST00000505081 CAP2P40123 477 aa17.18■□□□□ 0.34
DDX41-205ENST00000505081 PPP1R7Q15435 360 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms