RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 A0A087X1B8 175 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 KIF3BO15066 747 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 PEX11BO96011 259 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 ADH4P08319 380 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 ZFP36P26651 326 aaKnown RBP6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 FLT3P36888 993 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 INHBCP55103 352 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 CD69Q07108 199 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 CNGB1Q14028 1251 aaPredicted RBP6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 SPIDRQ14159 915 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 LRRC32Q14392 662 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 SEPT7Q16181 437 aaKnown RBP6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 MRGPREQ86SM8 312 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 KIF18BQ86Y91 864 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 ULK2Q8IYT8 1036 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 MDGA1Q8NFP4 955 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 NOL10Q9BSC4 688 aaKnown RBP6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 C14orf93Q9H972 538 aaKnown RBP6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 THG1LQ9NWX6 298 aaKnown RBP6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 RCAN3Q9UKA8 241 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 REXO2Q9Y3B8 237 aaKnown RBP6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 E9PCH4 1651 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 EFCAB6Q5THR3 1501 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 UHRF1BP1Q6BDS2 1440 aa6.69□□□□□ -1.34
DEPDC1B-203ENST00000505017 PLA2R1Q13018 1463 aa6.69□□□□□ -1.34
DEPDC1B-203ENST00000505017 MTSS1O43312 755 aa6.69□□□□□ -1.34
DEPDC1B-203ENST00000505017 RPS6KA4O75676 772 aa6.69□□□□□ -1.34
DEPDC1B-203ENST00000505017 PCDH8O95206 1070 aa6.69□□□□□ -1.34
DEPDC1B-203ENST00000505017 KRT40Q6A162 431 aa6.69□□□□□ -1.34
DEPDC1B-203ENST00000505017 RHOUQ7L0Q8 258 aa6.69□□□□□ -1.34
DEPDC1B-203ENST00000505017 LRRTM3Q86VH5 581 aa6.69□□□□□ -1.34
DEPDC1B-203ENST00000505017 LYSMD2Q8IV50 215 aa6.69□□□□□ -1.34
DEPDC1B-203ENST00000505017 GSPT2Q8IYD1 628 aaKnown RBP6.69□□□□□ -1.34
DEPDC1B-203ENST00000505017 EFHBQ8N7U6 833 aa6.69□□□□□ -1.34
DEPDC1B-203ENST00000505017 MB21D1Q8N884 522 aa6.69□□□□□ -1.34
DEPDC1B-203ENST00000505017 ATXN2LQ8WWM7 1075 aaKnown RBP6.69□□□□□ -1.34
DEPDC1B-203ENST00000505017 TMPRSS11EQ9UL52 423 aa6.69□□□□□ -1.34
DEPDC1B-203ENST00000505017 ARHGEF40Q8TER5 1519 aa6.69□□□□□ -1.34
DEPDC1B-203ENST00000505017 MYPNQ86TC9 1320 aa6.69□□□□□ -1.34
DEPDC1B-203ENST00000505017 ARHGAP31Q2M1Z3 1444 aa6.68□□□□□ -1.34
DEPDC1B-203ENST00000505017 PFKMP08237 780 aa6.68□□□□□ -1.34
DEPDC1B-203ENST00000505017 SMN1Q16637 294 aaKnown RBP6.68□□□□□ -1.34
DEPDC1B-203ENST00000505017 RABL3Q5HYI8 236 aa6.68□□□□□ -1.34
DEPDC1B-203ENST00000505017 NAIF1Q69YI7 327 aaPredicted RBP6.68□□□□□ -1.34
DEPDC1B-203ENST00000505017 TIGD7Q6NT04 549 aaPredicted RBP6.68□□□□□ -1.34
DEPDC1B-203ENST00000505017 CXorf67Q86X51 503 aaPredicted RBP6.68□□□□□ -1.34
DEPDC1B-203ENST00000505017 SMC1BQ8NDV3 1235 aa6.68□□□□□ -1.34
DEPDC1B-203ENST00000505017 PRDM12Q9H4Q4 367 aa6.68□□□□□ -1.34
DEPDC1B-203ENST00000505017 NCDNQ9UBB6 729 aa6.68□□□□□ -1.34
DEPDC1B-203ENST00000505017 DMRT1Q9Y5R6 373 aa6.68□□□□□ -1.34
DEPDC1B-203ENST00000505017 YEATS2Q9ULM3 1422 aa6.67□□□□□ -1.34
DEPDC1B-203ENST00000505017 CEP152O94986 1710 aa6.67□□□□□ -1.34
DEPDC1B-203ENST00000505017 ABCC3O15438 1527 aa6.67□□□□□ -1.34
DEPDC1B-203ENST00000505017 DAPK3O43293 454 aa6.67□□□□□ -1.34
DEPDC1B-203ENST00000505017 SEC24DO94855 1032 aaPredicted RBP6.67□□□□□ -1.34
DEPDC1B-203ENST00000505017 SYNPOQ8N3V7 929 aa6.67□□□□□ -1.34
DEPDC1B-203ENST00000505017 CPEB1Q9BZB8 566 aaKnown RBP6.67□□□□□ -1.34
DEPDC1B-203ENST00000505017 SPTLC3Q9NUV7 552 aa6.67□□□□□ -1.34
DEPDC1B-203ENST00000505017 ZKSCAN5Q9Y2L8 839 aa6.67□□□□□ -1.34
DEPDC1B-203ENST00000505017 CNTLNQ9NXG0 1405 aa6.67□□□□□ -1.34
DEPDC1B-203ENST00000505017 CAMSAP1Q5T5Y3 1602 aa6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 HOXA3O43365 443 aaPredicted RBP6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 LY86O95711 162 aa6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 NEK4P51957 841 aa6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 INHBEP58166 350 aa6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 PURAQ00577 322 aaKnown RBP6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 TCEA2Q15560 299 aa6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 CSRP2Q16527 193 aa6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 MRGPRGQ86SM5 289 aa6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 DHX37Q8IY37 1157 aaKnown RBP6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 ZZZ3Q8IYH5 903 aa6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 MSL3Q8N5Y2 521 aaKnown RBP6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 NINJ1Q92982 152 aa6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 MLST8Q9BVC4 326 aa6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 TARS2Q9BW92 718 aaKnown RBP6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 NRDE2Q9H7Z3 1164 aa6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 FANCLQ9NW38 375 aa6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 IFT57Q9NWB7 429 aa6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 MSRAQ9UJ68 235 aa6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 SPATA31E1Q6ZUB1 1445 aa6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 RALGAPBQ86X10 1494 aa6.66□□□□□ -1.34
DEPDC1B-203ENST00000505017 KIF1BO60333 1816 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 PRSS38A1L453 326 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 FOXN1O15353 648 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 ALDH1A2O94788 518 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 CD40P25942 277 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 CASRP41180 1078 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 NPEPPSP55786 919 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 MFSD5Q6N075 450 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 CNNM4Q6P4Q7 775 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 C16orf86Q6ZW13 317 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 SLC41A1Q8IVJ1 513 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 UNC5BQ8IZJ1 945 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 ST8SIA2Q92186 375 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 UBXN4Q92575 508 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 DRC1Q96MC2 740 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 UIMC1Q96RL1 719 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 LSM14BQ9BX40 385 aaKnown RBP6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 SYNPO2Q9UMS6 1093 aa6.65□□□□□ -1.34
DEPDC1B-203ENST00000505017 PCDHB6Q9Y5E3 794 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms