RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 TOMM22Q9NS69 142 aa7□□□□□ -1.29
COL4A5-207ENST00000504541 ERVK13-1Q9NX77 482 aa7□□□□□ -1.29
COL4A5-207ENST00000504541 SNTG2Q9NY99 539 aa7□□□□□ -1.29
COL4A5-207ENST00000504541 MTMR4Q9NYA4 1195 aa7□□□□□ -1.29
COL4A5-207ENST00000504541 RNF181Q9P0P0 153 aa7□□□□□ -1.29
COL4A5-207ENST00000504541 NYAP2Q9P242 653 aa7□□□□□ -1.29
COL4A5-207ENST00000504541 MAST2Q6P0Q8 1798 aa7□□□□□ -1.29
COL4A5-207ENST00000504541 TNKSO95271 1327 aa7□□□□□ -1.29
COL4A5-207ENST00000504541 COL4A5P29400 1685 aa7□□□□□ -1.29
COL4A5-207ENST00000504541 NPHP3-ACAD11A0A0J9YXS1 232 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 KLF18A0A0U1RQI7 1052 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 A0A1W2PQ45 241 aaPredicted RBP6.99□□□□□ -1.29
COL4A5-207ENST00000504541 A0A1W2PQJ5 194 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 A0A1W2PQY0 241 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 FADS2P1A8MWK0 482 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 CPLX1O14810 134 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 TTLL1O95922 423 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 CPP00450 1065 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 SHMT1P34896 483 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 METAP2P50579 478 aaKnown RBP eCLIP6.99□□□□□ -1.29
COL4A5-207ENST00000504541 PICALMQ13492 652 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 LAPTM5Q13571 262 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 RASA3Q14644 834 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 NTRK3Q16288 839 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 CERKLQ49MI3 558 aaPredicted RBP6.99□□□□□ -1.29
COL4A5-207ENST00000504541 RRP12Q5JTH9 1297 aaKnown RBP6.99□□□□□ -1.29
COL4A5-207ENST00000504541 GALNT18Q6P9A2 607 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 TMEM179Q6ZVK1 233 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 DPH6Q7L8W6 267 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 CHST3Q7LGC8 479 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 TEX2Q8IWB9 1127 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 ZFPM1Q8IX07 1006 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 TMEM52Q8NDY8 209 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 ZNF669Q96BR6 464 aaPredicted RBP6.99□□□□□ -1.29
COL4A5-207ENST00000504541 DYNLL2Q96FJ2 89 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 ASIC4Q96FT7 647 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 TCEANC2Q96MN5 208 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 CDC6Q99741 560 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 DEFB129Q9H1M3 183 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 KAT14Q9H8E8 782 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 CABP5Q9NP86 173 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 SAP30BPQ9UHR5 308 aaKnown RBP6.99□□□□□ -1.29
COL4A5-207ENST00000504541 ZNF112Q9UJU3 913 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 ATP6V1DQ9Y5K8 247 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 SRCAPQ6ZRS2 3230 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 WDR33Q9C0J8 1336 aaKnown RBP6.99□□□□□ -1.29
COL4A5-207ENST00000504541 ZNF541Q9H0D2 1346 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 SCN9AQ15858 1988 aa6.99□□□□□ -1.29
COL4A5-207ENST00000504541 MYO5AQ9Y4I1 1855 aaKnown RBP6.98□□□□□ -1.29
COL4A5-207ENST00000504541 CNTNAP1P78357 1384 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 MYH2Q9UKX2 1941 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 MYH13Q9UKX3 1938 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 TRBV23OR9-2A0A075B6M9 112 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 TRAV20A0A0B4J274 112 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 PRODHO43272 600 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 PRPF3O43395 683 aaKnown RBP6.98□□□□□ -1.29
COL4A5-207ENST00000504541 PSPNO60542 156 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 CTNND1O60716 968 aaKnown RBP6.98□□□□□ -1.29
COL4A5-207ENST00000504541 PRDM1O75626 825 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 DDNO94850 711 aaPredicted RBP6.98□□□□□ -1.29
COL4A5-207ENST00000504541 TCP10Q12799 353 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 SNX17Q15036 470 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 RAB3GAP1Q15042 981 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 NR0B2Q15466 257 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 ATL3Q6DD88 541 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 ZSWIM9Q86XI8 627 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 CPNE8Q86YQ8 564 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 CCDC83Q8IWF9 413 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 NSUN7Q8NE18 718 aaKnown RBP6.98□□□□□ -1.29
COL4A5-207ENST00000504541 CTCFLQ8NI51 663 aaPredicted RBP6.98□□□□□ -1.29
COL4A5-207ENST00000504541 FAM168AQ92567 244 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 TEPSINQ96N21 525 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 TMEM47Q9BQJ4 181 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 AARSD1Q9BTE6 412 aaKnown RBP6.98□□□□□ -1.29
COL4A5-207ENST00000504541 RNF26Q9BY78 433 aaPredicted RBP6.98□□□□□ -1.29
COL4A5-207ENST00000504541 LRRC2Q9BYS8 371 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 ZSCAN16Q9H4T2 348 aaPredicted RBP6.98□□□□□ -1.29
COL4A5-207ENST00000504541 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.98□□□□□ -1.29
COL4A5-207ENST00000504541 CLEC1BQ9P126 229 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 HACL1Q9UJ83 578 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 PCDHAC2Q9Y5I4 1007 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 PSME4Q14997 1843 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 STK36Q9NRP7 1315 aa6.98□□□□□ -1.29
COL4A5-207ENST00000504541 GOLGA8BA8MQT2 603 aa6.97□□□□□ -1.29
COL4A5-207ENST00000504541 TCP10L2B9ZVM9 353 aa6.97□□□□□ -1.29
COL4A5-207ENST00000504541 SMIM22K7EJ46 135 aa6.97□□□□□ -1.29
COL4A5-207ENST00000504541 STX6O43752 255 aa6.97□□□□□ -1.29
COL4A5-207ENST00000504541 NRDCO43847 1150 aa6.97□□□□□ -1.29
COL4A5-207ENST00000504541 LARGE1O95461 756 aa6.97□□□□□ -1.29
COL4A5-207ENST00000504541 CTDNEP1O95476 244 aa6.97□□□□□ -1.29
COL4A5-207ENST00000504541 THBDP07204 575 aa6.97□□□□□ -1.29
COL4A5-207ENST00000504541 ASNSP08243 561 aa6.97□□□□□ -1.29
COL4A5-207ENST00000504541 SNHG28P0DPA3 235 aa6.97□□□□□ -1.29
COL4A5-207ENST00000504541 PLS3P13797 630 aa6.97□□□□□ -1.29
COL4A5-207ENST00000504541 PTMSP20962 102 aa6.97□□□□□ -1.29
COL4A5-207ENST00000504541 SYT1P21579 422 aa6.97□□□□□ -1.29
COL4A5-207ENST00000504541 GJB2P29033 226 aa6.97□□□□□ -1.29
COL4A5-207ENST00000504541 EPS15P42566 896 aa6.97□□□□□ -1.29
COL4A5-207ENST00000504541 ST3GAL1Q11201 340 aa6.97□□□□□ -1.29
COL4A5-207ENST00000504541 SF1Q15637 639 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms