RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 EPCAMP16422 314 aa15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 HOXB8P17481 243 aaPredicted RBP15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 RINT1Q6NUQ1 792 aa15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 RNF135Q8IUD6 432 aa15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 CASP10Q92851 521 aa15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 POP1Q99575 1024 aaKnown RBP15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 HERC2P3Q9BVR0 1158 aa15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 BACH2Q9BYV9 841 aa15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 C2orf40Q9H1Z8 148 aa15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 PTPRHQ9HD43 1115 aa15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 ARHGAP28Q9P2N2 729 aa15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 CACNG4Q9UBN1 327 aa15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 FAN1Q9Y2M0 1017 aa15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 KIF3AQ9Y496 699 aa15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 STK24Q9Y6E0 443 aa15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 MTCL1Q9Y4B5 1905 aaKnown RBP15.46■□□□□ 0.07
PDLIM7-211ENST00000504318 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 PAPLNO95428 1278 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 ALDH2P05091 517 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 CNPP09543 421 aaKnown RBP15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 CLCN4P51793 760 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 GRIN1Q05586 938 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 GIT2Q14161 759 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 MAPK6Q16659 721 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 TMEM119Q4V9L6 283 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 TMEM31Q5JXX7 168 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 KIAA0319Q5VV43 1072 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 ARL6IP4Q66PJ3 421 aaKnown RBP15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 MCTP1Q6DN14 999 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 DTHD1Q6ZMT9 781 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 ZBTB8OSQ8IWT0 167 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 KIFAP3Q92845 792 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 KLHL5Q96PQ7 755 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 PAAF1Q9BRP4 392 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 APOL6Q9BWW8 343 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 UPF2Q9HAU5 1272 aaKnown RBP15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 CHST7Q9NS84 486 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 KLK14Q9P0G3 267 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 MUTYHQ9UIF7 546 aa15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 PRG3Q9Y2Y8 225 aaPredicted RBP15.45■□□□□ 0.06
PDLIM7-211ENST00000504318 PDCD11Q14690 1871 aaKnown RBP15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 MYO10Q9HD67 2058 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 N4BP3O15049 544 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 MEFVO15553 781 aaPredicted RBP15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 HIP1RO75146 1068 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 ALADP13716 330 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 NPTX2P47972 431 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 SLC12A3P55017 1021 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 GRIK3Q13003 919 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 PRPF4BQ13523 1007 aaKnown RBP15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 PPP2R5AQ15172 486 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 KRT79Q5XKE5 535 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 KANK3Q6NY19 840 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 APOL5Q9BWW9 433 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 RAB34Q9BZG1 259 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 GPR62Q9BZJ7 368 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 ADAM7Q9H2U9 754 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 RXFP1Q9HBX9 757 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 SNTG2Q9NY99 539 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 SMC3Q9UQE7 1217 aa15.44■□□□□ 0.06
PDLIM7-211ENST00000504318 RECQL4O94761 1208 aa15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 PROZP22891 400 aa15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 IGFBP6P24592 240 aaPredicted RBP15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 GUCY2CP25092 1073 aa15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 DSG1Q02413 1049 aa15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 NCBP1Q09161 790 aaKnown RBP15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 ARSHQ5FYA8 562 aa15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 CD300LGQ6UXG3 332 aa15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 C12orf76Q8N812 135 aaPredicted RBP15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 SYT2Q8N9I0 419 aaPredicted RBP15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 DEPTORQ8TB45 409 aa15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 KCNN1Q92952 543 aa15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 FAM193BQ96PV7 902 aaPredicted RBP15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 NTPCRQ9BSD7 190 aaKnown RBP15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 TRIM6Q9C030 488 aaPredicted RBP15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 POMKQ9H5K3 350 aa15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 TMEM134Q9H6X4 195 aa15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 STK39Q9UEW8 545 aa15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 DNM3Q9UQ16 869 aa15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 CITO14578 2027 aa15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 PHLPP2Q6ZVD8 1323 aa15.43■□□□□ 0.06
PDLIM7-211ENST00000504318 VWA3AA6NCI4 1184 aa15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 PRR33A8MZF0 331 aa15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 SRGAP2BP0DMP2 458 aa15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 OR1G1P47890 313 aa15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 EFNA5P52803 228 aa15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 ITIH3Q06033 890 aa15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 XKR4Q5GH76 650 aa15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 LARP1BQ659C4 914 aaKnown RBP15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 ALKAL1Q6UXT8 129 aa15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 KCTD17Q8N5Z5 321 aa15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 CEP120Q8N960 986 aa15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 RABGGTAQ92696 567 aa15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 RPS6KC1Q96S38 1066 aa15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 ACO2Q99798 780 aaKnown RBP15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 BLOC1S4Q9NUP1 217 aa15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 DZANK1Q9NVP4 752 aa15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 TNFSF13BQ9Y275 285 aa15.42■□□□□ 0.06
PDLIM7-211ENST00000504318 DOCK8Q8NF50 2099 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms