RNA–Protein interactions for RNA: ENST00000503621.5

CLDND1-209, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-209ENST00000503621 ZNF558Q96NG5 402 aa18.95■□□□□ 0.62
CLDND1-209ENST00000503621 KIFC3Q9BVG8 833 aa18.95■□□□□ 0.62
CLDND1-209ENST00000503621 TBX20Q9UMR3 447 aa18.95■□□□□ 0.62
CLDND1-209ENST00000503621 COL4A4P53420 1690 aaPredicted RBP18.95■□□□□ 0.62
CLDND1-209ENST00000503621 PRRC2BQ5JSZ5 2229 aaKnown RBP18.94■□□□□ 0.62
CLDND1-209ENST00000503621 NPHP3-ACAD11A0A0J9YXS1 232 aa18.94■□□□□ 0.62
CLDND1-209ENST00000503621 ARL5CA6NH57 179 aa18.94■□□□□ 0.62
CLDND1-209ENST00000503621 TTLL13PA6NNM8 815 aa18.94■□□□□ 0.62
CLDND1-209ENST00000503621 POLR2DO15514 142 aaKnown RBP18.94■□□□□ 0.62
CLDND1-209ENST00000503621 ALDH7A1P49419 539 aaKnown RBP18.94■□□□□ 0.62
CLDND1-209ENST00000503621 GATMP50440 423 aa18.94■□□□□ 0.62
CLDND1-209ENST00000503621 EHHADHQ08426 723 aa18.94■□□□□ 0.62
CLDND1-209ENST00000503621 ALKAL1Q6UXT8 129 aa18.94■□□□□ 0.62
CLDND1-209ENST00000503621 CCDC65Q8IXS2 484 aa18.94■□□□□ 0.62
CLDND1-209ENST00000503621 SLC39A11Q8N1S5 342 aa18.94■□□□□ 0.62
CLDND1-209ENST00000503621 MAFAQ8NHW3 353 aaPredicted RBP18.94■□□□□ 0.62
CLDND1-209ENST00000503621 MEIS3P2A8K0S8 358 aa18.93■□□□□ 0.62
CLDND1-209ENST00000503621 NPTXRO95502 500 aa18.93■□□□□ 0.62
CLDND1-209ENST00000503621 ITGB1P05556 798 aa18.93■□□□□ 0.62
CLDND1-209ENST00000503621 ADRB2P07550 413 aa18.93■□□□□ 0.62
CLDND1-209ENST00000503621 RAD51AP2Q09MP3 1159 aa18.93■□□□□ 0.62
CLDND1-209ENST00000503621 GRIK3Q13003 919 aa18.93■□□□□ 0.62
CLDND1-209ENST00000503621 PAN2Q504Q3 1202 aaKnown RBP18.93■□□□□ 0.62
CLDND1-209ENST00000503621 PDILTQ8N807 584 aa18.93■□□□□ 0.62
CLDND1-209ENST00000503621 KLHL23Q8NBE8 558 aa18.93■□□□□ 0.62
CLDND1-209ENST00000503621 NXF3Q9H4D5 531 aaKnown RBP18.93■□□□□ 0.62
CLDND1-209ENST00000503621 NRDE2Q9H7Z3 1164 aa18.93■□□□□ 0.62
CLDND1-209ENST00000503621 PLEKHA5Q9HAU0 1116 aa18.93■□□□□ 0.62
CLDND1-209ENST00000503621 POLD4Q9HCU8 107 aa18.93■□□□□ 0.62
CLDND1-209ENST00000503621 TOPORSQ9NS56 1045 aaPredicted RBP18.93■□□□□ 0.62
CLDND1-209ENST00000503621 SPG21Q9NZD8 308 aa18.93■□□□□ 0.62
CLDND1-209ENST00000503621 PCDHB13Q9Y5F0 798 aa18.93■□□□□ 0.62
CLDND1-209ENST00000503621 EFEMP2O95967 443 aa18.92■□□□□ 0.62
CLDND1-209ENST00000503621 KRT17Q04695 432 aa18.92■□□□□ 0.62
CLDND1-209ENST00000503621 CAMK1Q14012 370 aa18.92■□□□□ 0.62
CLDND1-209ENST00000503621 DHX8Q14562 1220 aaKnown RBP18.92■□□□□ 0.62
CLDND1-209ENST00000503621 FOXD4L6Q3SYB3 417 aaPredicted RBP18.92■□□□□ 0.62
CLDND1-209ENST00000503621 EEF1DP3Q658K8 133 aa18.92■□□□□ 0.62
CLDND1-209ENST00000503621 SLFN12LQ6IEE8 588 aa18.92■□□□□ 0.62
CLDND1-209ENST00000503621 FOXD4L3Q6VB84 417 aaPredicted RBP18.92■□□□□ 0.62
CLDND1-209ENST00000503621 STXBP4Q6ZWJ1 553 aa18.92■□□□□ 0.62
CLDND1-209ENST00000503621 ELOA2Q8IYF1 753 aaPredicted RBP18.92■□□□□ 0.62
CLDND1-209ENST00000503621 COLGALT2Q8IYK4 626 aa18.92■□□□□ 0.62
CLDND1-209ENST00000503621 RNF169Q8NCN4 708 aa18.92■□□□□ 0.62
CLDND1-209ENST00000503621 GDPD5Q8WTR4 605 aa18.92■□□□□ 0.62
CLDND1-209ENST00000503621 MRPS27Q92552 414 aaKnown RBP18.92■□□□□ 0.62
CLDND1-209ENST00000503621 LPPQ93052 612 aa18.92■□□□□ 0.62
CLDND1-209ENST00000503621 TARS2Q9BW92 718 aaKnown RBP18.92■□□□□ 0.62
CLDND1-209ENST00000503621 CDT1Q9H211 546 aa18.92■□□□□ 0.62
CLDND1-209ENST00000503621 RNF39Q9H2S5 420 aa18.92■□□□□ 0.62
CLDND1-209ENST00000503621 CERS4Q9HA82 394 aa18.92■□□□□ 0.62
CLDND1-209ENST00000503621 PUF60Q9UHX1 559 aaKnown RBP18.92■□□□□ 0.62
CLDND1-209ENST00000503621 IRAK3Q9Y616 596 aa18.92■□□□□ 0.62
CLDND1-209ENST00000503621 K7ENM7 598 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 EIF3DO15371 548 aaKnown RBP eCLIP18.91■□□□□ 0.62
CLDND1-209ENST00000503621 CLDN3O15551 220 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 ACTN4O43707 911 aaKnown RBP18.91■□□□□ 0.62
CLDND1-209ENST00000503621 FGF18O76093 207 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 C1RP00736 705 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 ALDH2P05091 517 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 GALTP07902 379 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 PFKFB1P16118 471 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 BCAR1P56945 870 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 SNRPFP62306 86 aaKnown RBP18.91■□□□□ 0.62
CLDND1-209ENST00000503621 NOLC1Q14978 699 aaKnown RBP eCLIP18.91■□□□□ 0.62
CLDND1-209ENST00000503621 POSTNQ15063 836 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 UNC13DQ70J99 1090 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 DYMQ7RTS9 669 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 SFR1Q86XK3 245 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 CEP57L1Q8IYX8 460 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 TMEM174Q8WUU8 243 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 PPP2R3CQ969Q6 453 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 DHX58Q96C10 678 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 GAD1Q99259 594 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 CCDC94Q9BW85 323 aaPredicted RBP18.91■□□□□ 0.62
CLDND1-209ENST00000503621 PANK2Q9BZ23 570 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 NGRNQ9NPE2 291 aaKnown RBP18.91■□□□□ 0.62
CLDND1-209ENST00000503621 PANK4Q9NVE7 773 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 CHMP5Q9NZZ3 219 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 EXOC7Q9UPT5 735 aa18.91■□□□□ 0.62
CLDND1-209ENST00000503621 A0A0B4J269 797 aa18.9■□□□□ 0.62
CLDND1-209ENST00000503621 RBAK-RBAKDNI3L0D1 243 aa18.9■□□□□ 0.62
CLDND1-209ENST00000503621 FSCN2O14926 492 aa18.9■□□□□ 0.62
CLDND1-209ENST00000503621 KIAA0391O15091 583 aaKnown RBP18.9■□□□□ 0.62
CLDND1-209ENST00000503621 GRM6O15303 877 aa18.9■□□□□ 0.62
CLDND1-209ENST00000503621 KCNE1P15382 129 aa18.9■□□□□ 0.62
CLDND1-209ENST00000503621 SYKP43405 635 aa18.9■□□□□ 0.62
CLDND1-209ENST00000503621 CACNB1Q02641 598 aaPredicted RBP18.9■□□□□ 0.62
CLDND1-209ENST00000503621 RNASELQ05823 741 aaKnown RBP18.9■□□□□ 0.62
CLDND1-209ENST00000503621 ZNF568Q3ZCX4 644 aa18.9■□□□□ 0.62
CLDND1-209ENST00000503621 HERC4Q5GLZ8 1057 aaPredicted RBP18.9■□□□□ 0.62
CLDND1-209ENST00000503621 KANK3Q6NY19 840 aa18.9■□□□□ 0.62
CLDND1-209ENST00000503621 DDX53Q86TM3 631 aaKnown RBP18.9■□□□□ 0.62
CLDND1-209ENST00000503621 CD302Q8IX05 232 aa18.9■□□□□ 0.62
CLDND1-209ENST00000503621 RNF168Q8IYW5 571 aaPredicted RBP18.9■□□□□ 0.62
CLDND1-209ENST00000503621 CCDC34Q96HJ3 373 aa18.9■□□□□ 0.62
CLDND1-209ENST00000503621 IGSF21Q96ID5 467 aa18.9■□□□□ 0.62
CLDND1-209ENST00000503621 NSUN3Q9H649 340 aaKnown RBP18.9■□□□□ 0.62
CLDND1-209ENST00000503621 TMEM206Q9H813 350 aa18.9■□□□□ 0.62
CLDND1-209ENST00000503621 MTUS1Q9ULD2 1270 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms