RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 GANQ9H2C0 597 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 PLAC1Q9HBJ0 212 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ANKEF1Q9NU02 776 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 RMND1Q9NWS8 449 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 IL1RAPL1Q9NZN1 696 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ATXN10Q9UBB4 475 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 CCPG1Q9ULG6 757 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 NOC2LQ9Y3T9 749 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 HYOU1Q9Y4L1 999 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 COMMD3-BMI1R4GMX3 469 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 LILRB3O75022 631 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 NR1I2O75469 434 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 SEC31AO94979 1220 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 GAAP10253 952 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 HARSP12081 509 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 TEAD1P28347 426 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 LONP1P36776 959 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 NDUFV1P49821 464 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 C21orf58P58505 322 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 RIPPLY1Q0D2K3 151 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 IFT88Q13099 833 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 BYSLQ13895 437 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 CAMK4Q16566 473 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 C6orf163Q5TEZ5 329 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 SPATA1Q5VX52 437 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 FBXW10Q5XX13 1052 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 TTC19Q6DKK2 380 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 NFXL1Q6ZNB6 911 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 PNMA8AQ86V59 439 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 NLRP8Q86W28 1048 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 RTKN2Q8IZC4 609 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 GPC2Q8N158 579 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 AGGF1Q8N302 714 aaeCLIP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 STKLD1Q8NE28 680 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 KIFC2Q96AC6 838 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 KLHL29Q96CT2 875 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 NAF1Q96HR8 494 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 DHTKD1Q96HY7 919 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ATP6V1G3Q96LB4 118 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 GBP5Q96PP8 586 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 SIGLEC11Q96RL6 698 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 KRT23Q9C075 422 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ZC3H12CQ9C0D7 883 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 TAF1DQ9H5J8 278 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 TMEM134Q9H6X4 195 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 KAT14Q9H8E8 782 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 SLC24A3Q9HC58 644 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ATP13A1Q9HD20 1204 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 SCHIP1Q9P0W5 487 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 DERAQ9Y315 318 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 AFG3L2Q9Y4W6 797 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 EPN1Q9Y6I3 576 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 FGFR1OPO95684 399 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 PXNP49023 591 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 CCNG1P51959 295 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 MXRA7P84157 204 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 OCRLQ01968 901 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 GCNT1Q02742 428 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ITIH4Q14624 930 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 PTGISQ16647 500 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 CFAP221Q4G0U5 840 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 KRT27Q7Z3Y8 459 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 SREK1Q8WXA9 508 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 RBM41Q96IZ5 413 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 C8orf76Q96K31 380 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 MAK16Q9BXY0 300 aaKnown RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 TAOK3Q9H2K8 898 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 NOD2Q9HC29 1040 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 TXLNGQ9NUQ3 528 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF219Q9P2Y4 722 aaPredicted RBP3.01□□□□□ -1.93
NEDD4-204ENST00000503468 EXOC6BQ9Y2D4 811 aa3.01□□□□□ -1.93
NEDD4-204ENST00000503468 MYH11P35749 1972 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 IFIT3O14879 490 aaKnown RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 RAD21O60216 631 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 ZWINTO95229 277 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 MZF1P28698 734 aaPredicted RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 SEPT6Q14141 434 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 TMEM259Q4ZIN3 620 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 PLEKHA7Q6IQ23 1121 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 NLRP14Q86W24 1093 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 NKAPQ8N5F7 415 aaKnown RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 KDM1BQ8NB78 822 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 RASSF8Q8NHQ8 419 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 PXYLP1Q8TE99 480 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 MZB1Q8WU39 189 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 AZIN2Q96A70 460 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 DUS3LQ96G46 650 aaKnown RBP3□□□□□ -1.93
NEDD4-204ENST00000503468 CHRNA10Q9GZZ6 450 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 UNC45AQ9H3U1 944 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 RIC8AQ9NPQ8 531 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 TBCCD1Q9NVR7 557 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 CNTN3Q9P232 1028 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 SATB2Q9UPW6 733 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 USP27XA6NNY8 438 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 WASH4PA8MWX3 477 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 BTBD19C9JJ37 291 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 DPYSL4O14531 572 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 GABRDO14764 452 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 TGFB1I1O43294 461 aa3□□□□□ -1.93
NEDD4-204ENST00000503468 KCNQ2O43526 872 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms