RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 BTNL9Q6UXG8 535 aa3.4□□□□□ -1.87
SMAD1-203ENST00000502342 PDZD4Q76G19 769 aaPredicted RBP3.4□□□□□ -1.87
SMAD1-203ENST00000502342 KCNK18Q7Z418 384 aa3.4□□□□□ -1.87
SMAD1-203ENST00000502342 APBB1IPQ7Z5R6 666 aaPredicted RBP3.4□□□□□ -1.87
SMAD1-203ENST00000502342 AMOTL1Q8IY63 956 aa3.4□□□□□ -1.87
SMAD1-203ENST00000502342 LILRA3Q8N6C8 439 aaPredicted RBP3.4□□□□□ -1.87
SMAD1-203ENST00000502342 GPR156Q8NFN8 814 aa3.4□□□□□ -1.87
SMAD1-203ENST00000502342 CPT1CQ8TCG5 803 aa3.4□□□□□ -1.87
SMAD1-203ENST00000502342 DPF2Q92785 391 aa3.4□□□□□ -1.87
SMAD1-203ENST00000502342 CLIP3Q96DZ5 547 aa3.4□□□□□ -1.87
SMAD1-203ENST00000502342 CEP95Q96GE4 821 aa3.4□□□□□ -1.87
SMAD1-203ENST00000502342 PHACTR3Q96KR7 559 aa3.4□□□□□ -1.87
SMAD1-203ENST00000502342 UHRF1Q96T88 793 aaPredicted RBP3.4□□□□□ -1.87
SMAD1-203ENST00000502342 ADI1Q9BV57 179 aa3.4□□□□□ -1.87
SMAD1-203ENST00000502342 CCDC8Q9H0W5 538 aaPredicted RBP3.4□□□□□ -1.87
SMAD1-203ENST00000502342 DMRT3Q9NQL9 472 aa3.4□□□□□ -1.87
SMAD1-203ENST00000502342 GPRC5DQ9NZD1 345 aa3.4□□□□□ -1.87
SMAD1-203ENST00000502342 POGKQ9P215 609 aa3.4□□□□□ -1.87
SMAD1-203ENST00000502342 SRRDQ9UH36 339 aa3.4□□□□□ -1.87
SMAD1-203ENST00000502342 DNM3Q9UQ16 869 aa3.4□□□□□ -1.87
SMAD1-203ENST00000502342 PRR5-ARHGAP8B1AHC4 643 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 LEFTY2O00292 366 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 WNT10BO00744 389 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 SCAF4O95104 1147 aaKnown RBP3.39□□□□□ -1.87
SMAD1-203ENST00000502342 ZNF202O95125 648 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 GASTP01350 101 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 ACVRL1P37023 503 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 SLC5A3P53794 718 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 CSRP2Q16527 193 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 MUM1Q2TAK8 710 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 RABL3Q5HYI8 236 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 MFSD14BQ5SR56 506 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 PRAMEF14Q5SWL7 426 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 Q6ZVL8 140 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 CNTD1Q8N815 330 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 RNF169Q8NCN4 708 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 SLC35B2Q8TB61 432 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 CACTINQ8WUQ7 758 aaKnown RBP3.39□□□□□ -1.87
SMAD1-203ENST00000502342 ZNF480Q8WV37 535 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 NEU4Q8WWR8 484 aaPredicted RBP3.39□□□□□ -1.87
SMAD1-203ENST00000502342 MRIQ9BWK5 157 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 CPEB1Q9BZB8 566 aaKnown RBP3.39□□□□□ -1.87
SMAD1-203ENST00000502342 ZNF768Q9H5H4 540 aaKnown RBP3.39□□□□□ -1.87
SMAD1-203ENST00000502342 GREM2Q9H772 168 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 ZNF703Q9H7S9 590 aaPredicted RBP3.39□□□□□ -1.87
SMAD1-203ENST00000502342 NRDE2Q9H7Z3 1164 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 EIF2B4Q9UI10 523 aaKnown RBP3.39□□□□□ -1.87
SMAD1-203ENST00000502342 CLCA2Q9UQC9 943 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 ATP8A1Q9Y2Q0 1164 aa3.39□□□□□ -1.87
SMAD1-203ENST00000502342 TBKBP1A7MCY6 615 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 RECQL4O94761 1208 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 MT-CO1P00395 513 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 SLPIP03973 132 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 CDK11BP21127 795 aaKnown RBP3.38□□□□□ -1.87
SMAD1-203ENST00000502342 APOBEC3AP31941 199 aaPredicted RBP3.38□□□□□ -1.87
SMAD1-203ENST00000502342 MCM7P33993 719 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 GUCY2FP51841 1108 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 HMGA2P52926 109 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 RAP2BP61225 183 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 ERVK-21P61565 698 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 AMPD3Q01432 767 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 PPP3CAQ08209 521 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 ITKQ08881 620 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 ABHD18Q0P651 414 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 KLF1Q13351 362 aaPredicted RBP3.38□□□□□ -1.87
SMAD1-203ENST00000502342 TOB2Q14106 344 aaPredicted RBP3.38□□□□□ -1.87
SMAD1-203ENST00000502342 FHL2Q14192 279 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 ACAP2Q15057 778 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 VPS72Q15906 364 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 ADRM1Q16186 407 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 EFCAB12Q6NXP0 572 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 PQLC1Q8N2U9 271 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 ZNF483Q8TF39 744 aaPredicted RBP3.38□□□□□ -1.87
SMAD1-203ENST00000502342 TEX101Q9BY14 249 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 KRTAP17-1Q9BYP8 105 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 PUS7LQ9H0K6 701 aaKnown RBP3.38□□□□□ -1.87
SMAD1-203ENST00000502342 CCM2LQ9NUG4 571 aaPredicted RBP3.38□□□□□ -1.87
SMAD1-203ENST00000502342 TRPM5Q9NZQ8 1165 aa3.38□□□□□ -1.87
SMAD1-203ENST00000502342 ZNF185O15231 689 aa3.37□□□□□ -1.87
SMAD1-203ENST00000502342 KATNA1O75449 491 aa3.37□□□□□ -1.87
SMAD1-203ENST00000502342 MYBL2P10244 700 aa3.37□□□□□ -1.87
SMAD1-203ENST00000502342 NR4A1P22736 598 aa3.37□□□□□ -1.87
SMAD1-203ENST00000502342 ECHS1P30084 290 aa3.37□□□□□ -1.87
SMAD1-203ENST00000502342 CRHR1P34998 444 aa3.37□□□□□ -1.87
SMAD1-203ENST00000502342 IARSP41252 1262 aaKnown RBP3.37□□□□□ -1.87
SMAD1-203ENST00000502342 CDKN1CP49918 316 aaPredicted RBP3.37□□□□□ -1.87
SMAD1-203ENST00000502342 RNASE9P60153 205 aaKnown RBP3.37□□□□□ -1.87
SMAD1-203ENST00000502342 FAM189BP81408 668 aa3.37□□□□□ -1.87
SMAD1-203ENST00000502342 NHLH2Q02577 135 aa3.37□□□□□ -1.87
SMAD1-203ENST00000502342 SEPT2Q15019 361 aa3.37□□□□□ -1.87
SMAD1-203ENST00000502342 PCBP2Q15366 365 aaKnown RBP eCLIP3.37□□□□□ -1.87
SMAD1-203ENST00000502342 DCAF17Q5H9S7 520 aaPredicted RBP3.37□□□□□ -1.87
SMAD1-203ENST00000502342 RRP12Q5JTH9 1297 aaKnown RBP3.37□□□□□ -1.87
SMAD1-203ENST00000502342 DOK3Q7L591 496 aa3.37□□□□□ -1.87
SMAD1-203ENST00000502342 SYT12Q8IV01 421 aa3.37□□□□□ -1.87
SMAD1-203ENST00000502342 ZNF276Q8N554 614 aa3.37□□□□□ -1.87
SMAD1-203ENST00000502342 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.37□□□□□ -1.87
SMAD1-203ENST00000502342 OR52N2Q8NGI0 321 aa3.37□□□□□ -1.87
SMAD1-203ENST00000502342 CCHCR1Q8TD31 782 aa3.37□□□□□ -1.87
SMAD1-203ENST00000502342 NRG4Q8WWG1 115 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms