RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 CNGA1P29973 690 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 MCCD1P59942 119 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-204ENST00000501271 KRT76Q01546 638 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 SLC20A2Q08357 652 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 SLC39A4Q6P5W5 647 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 UBL4BQ8N7F7 174 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 HELQQ8TDG4 1101 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 PARD3BQ8TEW8 1205 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 CAMKK2Q96RR4 588 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 IWS1Q96ST2 819 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 RPAP3Q9H6T3 665 aaPredicted RBP10.62□□□□□ -0.71
CLIP1-204ENST00000501271 ANKEF1Q9NU02 776 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 MAP3K20Q9NYL2 800 aaKnown RBP10.62□□□□□ -0.71
CLIP1-204ENST00000501271 TCEAL9Q9UHQ7 104 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 ATP8A1Q9Y2Q0 1164 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 RIPK3Q9Y572 518 aa10.62□□□□□ -0.71
CLIP1-204ENST00000501271 DCDC2CA8MYV0 355 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 PHF2O75151 1096 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 MTA2O94776 668 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 GZMAP12544 262 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 SFNP31947 248 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 PTGIRP43119 386 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 PEX5P50542 639 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 SEC24CP53992 1094 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 DMP1Q13316 513 aaPredicted RBP10.61□□□□□ -0.71
CLIP1-204ENST00000501271 DHX34Q14147 1143 aaKnown RBP10.61□□□□□ -0.71
CLIP1-204ENST00000501271 PPP2R5EQ16537 467 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 ARHGEF16Q5VV41 709 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 KRT39Q6A163 491 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 TTC27Q6P3X3 843 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 PRELID2Q8N945 189 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 TAS1R2Q8TE23 839 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 CD101Q93033 1021 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 FAM84AQ96KN4 292 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 SLC12A6Q9UHW9 1150 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 TRPC6Q9Y210 931 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 TELO2Q9Y4R8 837 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 ADGRA3Q8IWK6 1321 aa10.61□□□□□ -0.71
CLIP1-204ENST00000501271 TCRBV7S2A1N4TA0A589 114 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 FAM187AA6NFU0 413 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 CYP11B1P15538 503 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 MFAP3P55082 362 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 BIRC3Q13489 604 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 ZDHHC24Q6UX98 284 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 RUFY4Q6ZNE9 571 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 EFCAB13Q8IY85 973 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 ZNF564Q8TBZ8 553 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-204ENST00000501271 DHX38Q92620 1227 aaKnown RBP10.6□□□□□ -0.71
CLIP1-204ENST00000501271 ATG4CQ96DT6 458 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 RPS6KC1Q96S38 1066 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 NUP85Q9BW27 656 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 EPB41L4BQ9H329 900 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 TMEM8AQ9HCN3 771 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 KMT5AQ9NQR1 393 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 BCCIPQ9P287 314 aaKnown RBP eCLIP10.6□□□□□ -0.71
CLIP1-204ENST00000501271 EXOC7Q9UPT5 735 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 SNX24Q9Y343 169 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 COQ4Q9Y3A0 265 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 PHIPQ8WWQ0 1821 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 MYH9P35579 1960 aaKnown RBP10.6□□□□□ -0.71
CLIP1-204ENST00000501271 VWA5AO00534 786 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 KIAA0391O15091 583 aaKnown RBP10.6□□□□□ -0.71
CLIP1-204ENST00000501271 ZNF862O60290 1169 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 CALCAP01258 141 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 PYGMP11217 842 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 CTNNA2P26232 953 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 GPC3P51654 580 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 SMTNP53814 917 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 BAATQ14032 418 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-204ENST00000501271 CIAPIN1Q6FI81 312 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 SLC17A8Q8NDX2 589 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 MYCBPAPQ8TBZ2 947 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 ZNF473Q8WTR7 871 aaKnown RBP10.6□□□□□ -0.71
CLIP1-204ENST00000501271 ZNF653Q96CK0 615 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 MOV10L1Q9BXT6 1211 aaKnown RBP10.6□□□□□ -0.71
CLIP1-204ENST00000501271 VPS33BQ9H267 617 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 RNF146Q9NTX7 359 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.6□□□□□ -0.71
CLIP1-204ENST00000501271 GABBR1Q9UBS5 961 aa10.6□□□□□ -0.71
CLIP1-204ENST00000501271 CNOT8Q9UFF9 292 aaKnown RBP10.6□□□□□ -0.71
CLIP1-204ENST00000501271 CTDP1Q9Y5B0 961 aaPredicted RBP10.6□□□□□ -0.71
CLIP1-204ENST00000501271 CTNND1O60716 968 aaKnown RBP10.59□□□□□ -0.71
CLIP1-204ENST00000501271 ZBED4O75132 1171 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 STBD1O95210 358 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 CYP1A2P05177 515 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 TMOD1P28289 359 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 RXRBP28702 533 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 PDE6CP51160 858 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 PLTPP55058 493 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 CDR2Q01850 454 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 CYP24A1Q07973 514 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 CLUL1Q15846 466 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 KRT71Q3SY84 523 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 SEL1L2Q5TEA6 688 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 AGBL2Q5U5Z8 902 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 TADA2BQ86TJ2 420 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 NLRP14Q86W24 1093 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 ARFGAP2Q8N6H7 521 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 SAMD3Q8N6K7 520 aa10.59□□□□□ -0.71
CLIP1-204ENST00000501271 FBXL13Q8NEE6 735 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms