RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-222ENST00000498810 GRM6O15303 877 aa11.81□□□□□ -0.52
CDK11A-222ENST00000498810 ZC3H11AO75152 810 aaKnown RBP eCLIP11.81□□□□□ -0.52
CDK11A-222ENST00000498810 EOMESO95936 686 aa11.81□□□□□ -0.52
CDK11A-222ENST00000498810 XRCC6P12956 609 aaKnown RBP eCLIP11.81□□□□□ -0.52
CDK11A-222ENST00000498810 LIG1P18858 919 aa11.81□□□□□ -0.52
CDK11A-222ENST00000498810 KCNA5P22460 613 aa11.81□□□□□ -0.52
CDK11A-222ENST00000498810 NOTUMQ6P988 496 aa11.81□□□□□ -0.52
CDK11A-222ENST00000498810 COLGALT1Q8NBJ5 622 aa11.81□□□□□ -0.52
CDK11A-222ENST00000498810 TMEM87AQ8NBN3 555 aa11.81□□□□□ -0.52
CDK11A-222ENST00000498810 ADAMTS19Q8TE59 1207 aa11.81□□□□□ -0.52
CDK11A-222ENST00000498810 IFT74Q96LB3 600 aa11.81□□□□□ -0.52
CDK11A-222ENST00000498810 ZNF558Q96NG5 402 aa11.81□□□□□ -0.52
CDK11A-222ENST00000498810 FAM193BQ96PV7 902 aaPredicted RBP11.81□□□□□ -0.52
CDK11A-222ENST00000498810 GBP3Q9H0R5 595 aa11.81□□□□□ -0.52
CDK11A-222ENST00000498810 IGFLR1Q9H665 355 aa11.81□□□□□ -0.52
CDK11A-222ENST00000498810 UBE2ZQ9H832 354 aaPredicted RBP11.81□□□□□ -0.52
CDK11A-222ENST00000498810 IFT122Q9HBG6 1241 aa11.81□□□□□ -0.52
CDK11A-222ENST00000498810 XPNPEP1Q9NQW7 623 aa11.81□□□□□ -0.52
CDK11A-222ENST00000498810 ENTPD7Q9NQZ7 604 aa11.81□□□□□ -0.52
CDK11A-222ENST00000498810 DDX19AQ9NUU7 478 aaKnown RBP11.81□□□□□ -0.52
CDK11A-222ENST00000498810 TYW1Q9NV66 732 aaKnown RBP11.81□□□□□ -0.52
CDK11A-222ENST00000498810 CLDND1Q9NY35 253 aa11.81□□□□□ -0.52
CDK11A-222ENST00000498810 PUF60Q9UHX1 559 aaKnown RBP11.81□□□□□ -0.52
CDK11A-222ENST00000498810 DBR1Q9UK59 544 aaKnown RBP11.81□□□□□ -0.52
CDK11A-222ENST00000498810 VWA3AA6NCI4 1184 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 CAPN5O15484 640 aaPredicted RBP11.8□□□□□ -0.52
CDK11A-222ENST00000498810 FGF18O76093 207 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 SSBP05455 408 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDK11A-222ENST00000498810 ITGB1P05556 798 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 SPATA31C1P0DKV0 1188 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 SNRPBP14678 240 aaKnown RBP11.8□□□□□ -0.52
CDK11A-222ENST00000498810 MUTP22033 750 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 AXLP30530 894 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 PRPHP41219 470 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 KCNQ1P51787 676 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 KRT17Q04695 432 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 CAPSQ13938 189 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 BMS1Q14692 1282 aaKnown RBP11.8□□□□□ -0.52
CDK11A-222ENST00000498810 PPP2R5AQ15172 486 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 PCBP1Q15365 356 aaKnown RBP eCLIP11.8□□□□□ -0.52
CDK11A-222ENST00000498810 LCE2AQ5TA79 106 aaPredicted RBP11.8□□□□□ -0.52
CDK11A-222ENST00000498810 BRAPQ7Z569 592 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 BPHLQ86WA6 291 aaPredicted RBP11.8□□□□□ -0.52
CDK11A-222ENST00000498810 HSCBQ8IWL3 235 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 DEPTORQ8TB45 409 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 ASAP3Q8TDY4 903 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 POF1BQ8WVV4 589 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 RSPH1Q8WYR4 309 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 LPPQ93052 612 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 CASD1Q96PB1 797 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 UHRF1Q96T88 793 aaPredicted RBP11.8□□□□□ -0.52
CDK11A-222ENST00000498810 APOL6Q9BWW8 343 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 C2orf40Q9H1Z8 148 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 BHMT2Q9H2M3 363 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 TLR9Q9NR96 1032 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 PLAGL2Q9UPG8 496 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 KIAA1024Q9UPX6 916 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 FAM50BQ9Y247 325 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 PCDHB2Q9Y5E7 798 aa11.8□□□□□ -0.52
CDK11A-222ENST00000498810 MYO7AQ13402 2215 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 CARNS1A5YM72 827 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 K7ELQ4 463 aaPredicted RBP11.79□□□□□ -0.52
CDK11A-222ENST00000498810 NCK2O43639 380 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 BMP15O95972 392 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 SRGAP2BP0DMP2 458 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 ALDH7A1P49419 539 aaKnown RBP11.79□□□□□ -0.52
CDK11A-222ENST00000498810 NDUFV1P49821 464 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 TOB1P50616 345 aaPredicted RBP11.79□□□□□ -0.52
CDK11A-222ENST00000498810 PTENP60484 403 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 FAM189BP81408 668 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 UBE3AQ05086 875 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 NNTQ13423 1086 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 PDIA5Q14554 519 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 CLLU1OSQ5K130 101 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 PLPP4Q5VZY2 271 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 KCNT2Q6UVM3 1135 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 CNNM3Q8NE01 707 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 CCDC51Q96ER9 411 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 TMEM169Q96HH4 297 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 CPB2Q96IY4 423 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 MINDY3Q9H8M7 445 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 RSAD1Q9HA92 442 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 GPRC5CQ9NQ84 441 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 DNM3Q9UQ16 869 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 CNTNAP2Q9UHC6 1331 aa11.79□□□□□ -0.52
CDK11A-222ENST00000498810 BRWD1Q9NSI6 2320 aa11.78□□□□□ -0.52
CDK11A-222ENST00000498810 PP2D1A8MPX8 630 aa11.78□□□□□ -0.52
CDK11A-222ENST00000498810 TSPAN1O60635 241 aa11.78□□□□□ -0.52
CDK11A-222ENST00000498810 ADH1CP00326 375 aa11.78□□□□□ -0.52
CDK11A-222ENST00000498810 ITGA4P13612 1032 aa11.78□□□□□ -0.52
CDK11A-222ENST00000498810 GLRA2P23416 452 aa11.78□□□□□ -0.52
CDK11A-222ENST00000498810 ARL2P36404 184 aa11.78□□□□□ -0.52
CDK11A-222ENST00000498810 PBX3P40426 434 aa11.78□□□□□ -0.52
CDK11A-222ENST00000498810 ATP2C1P98194 919 aaPredicted RBP11.78□□□□□ -0.52
CDK11A-222ENST00000498810 NOMO2Q5JPE7 1267 aa11.78□□□□□ -0.52
CDK11A-222ENST00000498810 RBM23Q86U06 439 aaKnown RBP11.78□□□□□ -0.52
CDK11A-222ENST00000498810 IGSF22Q8N9C0 903 aa11.78□□□□□ -0.52
CDK11A-222ENST00000498810 KIFAP3Q92845 792 aa11.78□□□□□ -0.52
CDK11A-222ENST00000498810 PABPC5Q96DU9 382 aaKnown RBP11.78□□□□□ -0.52
CDK11A-222ENST00000498810 RPS6KC1Q96S38 1066 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms