RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 OLFML3Q9NRN5 406 aa18.39■□□□□ 0.53
PRKCB-210ENST00000498739 ANKFY1Q9P2R3 1169 aa18.39■□□□□ 0.53
PRKCB-210ENST00000498739 FNDC1Q4ZHG4 1894 aaPredicted RBP18.38■□□□□ 0.53
PRKCB-210ENST00000498739 HARSP12081 509 aaKnown RBP18.38■□□□□ 0.53
PRKCB-210ENST00000498739 MLH1P40692 756 aa18.38■□□□□ 0.53
PRKCB-210ENST00000498739 LIG4P49917 911 aa18.38■□□□□ 0.53
PRKCB-210ENST00000498739 CUL4BQ13620 913 aa18.38■□□□□ 0.53
PRKCB-210ENST00000498739 CNNM4Q6P4Q7 775 aa18.38■□□□□ 0.53
PRKCB-210ENST00000498739 MPZL3Q6UWV2 235 aa18.38■□□□□ 0.53
PRKCB-210ENST00000498739 ZPBP2Q6X784 338 aa18.38■□□□□ 0.53
PRKCB-210ENST00000498739 PAGE5Q96GU1 130 aa18.38■□□□□ 0.53
PRKCB-210ENST00000498739 CDT1Q9H211 546 aa18.38■□□□□ 0.53
PRKCB-210ENST00000498739 ST6GALNAC4Q9H4F1 302 aa18.38■□□□□ 0.53
PRKCB-210ENST00000498739 CWH43Q9H720 699 aa18.38■□□□□ 0.53
PRKCB-210ENST00000498739 PTPRHQ9HD43 1115 aa18.38■□□□□ 0.53
PRKCB-210ENST00000498739 SNTG2Q9NY99 539 aa18.38■□□□□ 0.53
PRKCB-210ENST00000498739 GIT1Q9Y2X7 761 aa18.38■□□□□ 0.53
PRKCB-210ENST00000498739 HNRNPDLO14979 420 aaKnown RBP18.37■□□□□ 0.53
PRKCB-210ENST00000498739 TOM1L1O75674 476 aa18.37■□□□□ 0.53
PRKCB-210ENST00000498739 ZNF202O95125 648 aa18.37■□□□□ 0.53
PRKCB-210ENST00000498739 FOSL2P15408 326 aa18.37■□□□□ 0.53
PRKCB-210ENST00000498739 PROZP22891 400 aa18.37■□□□□ 0.53
PRKCB-210ENST00000498739 MATR3P43243 847 aaKnown RBP eCLIP18.37■□□□□ 0.532e-6■■■■□ 21.3
PRKCB-210ENST00000498739 AFF1P51825 1210 aaKnown RBP18.37■□□□□ 0.53
PRKCB-210ENST00000498739 RNASELQ05823 741 aaKnown RBP18.37■□□□□ 0.53
PRKCB-210ENST00000498739 GPM6BQ13491 265 aa18.37■□□□□ 0.53
PRKCB-210ENST00000498739 KRBA2Q6ZNG9 492 aa18.37■□□□□ 0.53
PRKCB-210ENST00000498739 UNC13DQ70J99 1090 aa18.37■□□□□ 0.53
PRKCB-210ENST00000498739 MAP4K3Q8IVH8 894 aa18.37■□□□□ 0.53
PRKCB-210ENST00000498739 HPS3Q969F9 1004 aa18.37■□□□□ 0.53
PRKCB-210ENST00000498739 HVCN1Q96D96 273 aa18.37■□□□□ 0.53
PRKCB-210ENST00000498739 ZBTB45Q96K62 511 aaPredicted RBP18.37■□□□□ 0.53
PRKCB-210ENST00000498739 GAD1Q99259 594 aa18.37■□□□□ 0.53
PRKCB-210ENST00000498739 AAASQ9NRG9 546 aa18.37■□□□□ 0.53
PRKCB-210ENST00000498739 TBC1D13Q9NVG8 400 aa18.37■□□□□ 0.53
PRKCB-210ENST00000498739 KLK14Q9P0G3 267 aa18.37■□□□□ 0.53
PRKCB-210ENST00000498739 GDAQ9Y2T3 454 aa18.37■□□□□ 0.53
PRKCB-210ENST00000498739 COL4A4P53420 1690 aaPredicted RBP18.37■□□□□ 0.53
PRKCB-210ENST00000498739 ARL5CA6NH57 179 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 C5orf67F2Z3F1 127 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 ABLIM1O14639 778 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 RECQL4O94761 1208 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 POMCP01189 267 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 PIGRP01833 764 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 RB1P06400 928 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 MYBP10242 640 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 MCF2P10911 925 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 LAG3P18627 525 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 IGFBP4P22692 258 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 SCNN1GP51170 649 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 CASP5P51878 434 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 OSTNP61366 133 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 ADGRE1Q14246 886 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 RALGAPA2Q2PPJ7 1873 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 CEP120Q8N960 986 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 COLGALT1Q8NBJ5 622 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 ZFP42Q96MM3 310 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 PLVAPQ9BX97 442 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 FGFBP2Q9BYJ0 223 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 GBP3Q9H0R5 595 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 KANSL3Q9P2N6 904 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 PCDHB13Q9Y5F0 798 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 PCDHB12Q9Y5F1 795 aa18.36■□□□□ 0.53
PRKCB-210ENST00000498739 NLRC5Q86WI3 1866 aa18.35■□□□□ 0.53
PRKCB-210ENST00000498739 KIAA1671Q9BY89 1806 aa18.35■□□□□ 0.53
PRKCB-210ENST00000498739 H3BNC9 293 aa18.35■□□□□ 0.53
PRKCB-210ENST00000498739 CLDN3O15551 220 aa18.35■□□□□ 0.53
PRKCB-210ENST00000498739 ZC3H11AO75152 810 aaKnown RBP eCLIP18.35■□□□□ 0.539e-6■■□□□ 13.5
PRKCB-210ENST00000498739 PPP1R37O75864 691 aa18.35■□□□□ 0.53
PRKCB-210ENST00000498739 PBX3P40426 434 aa18.35■□□□□ 0.53
PRKCB-210ENST00000498739 GRM5P41594 1212 aa18.35■□□□□ 0.53
PRKCB-210ENST00000498739 ALCAMQ13740 583 aa18.35■□□□□ 0.53
PRKCB-210ENST00000498739 NOLC1Q14978 699 aaKnown RBP eCLIP18.35■□□□□ 0.53
PRKCB-210ENST00000498739 FAM26FQ5R3K3 315 aa18.35■□□□□ 0.53
PRKCB-210ENST00000498739 L1TD1Q5T7N2 865 aaKnown RBP18.35■□□□□ 0.53
PRKCB-210ENST00000498739 THNSL1Q8IYQ7 743 aa18.35■□□□□ 0.53
PRKCB-210ENST00000498739 ZNF558Q96NG5 402 aa18.35■□□□□ 0.53
PRKCB-210ENST00000498739 RPS6KC1Q96S38 1066 aa18.35■□□□□ 0.53
PRKCB-210ENST00000498739 C11orf84Q9BUA3 381 aaPredicted RBP18.35■□□□□ 0.53
PRKCB-210ENST00000498739 CCDC94Q9BW85 323 aaPredicted RBP18.35■□□□□ 0.53
PRKCB-210ENST00000498739 STRA6Q9BX79 667 aa18.35■□□□□ 0.53
PRKCB-210ENST00000498739 PVALEFA0A1B0GWK0 134 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 INPPL1O15357 1258 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 GTPBP6O43824 516 aaPredicted RBP18.34■□□□□ 0.53
PRKCB-210ENST00000498739 LPXNO60711 386 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 GADD45BO75293 160 aaPredicted RBP18.34■□□□□ 0.53
PRKCB-210ENST00000498739 PRR29P0C7W0 189 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 FAM160A1Q05DH4 1040 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 MCL1Q07820 350 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 KCNA1Q09470 495 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 KCNT2Q6UVM3 1135 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 STXBP4Q6ZWJ1 553 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 ZNF280BQ86YH2 543 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 FMR1NBQ8N0W7 255 aaPredicted RBP18.34■□□□□ 0.53
PRKCB-210ENST00000498739 KLHL23Q8NBE8 558 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 TMEM87AQ8NBN3 555 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 GLIS3Q8NEA6 775 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 P2RX5Q93086 422 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 CCDC34Q96HJ3 373 aa18.34■□□□□ 0.53
PRKCB-210ENST00000498739 FAM193BQ96PV7 902 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms