RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 PDXDC2PQ6P474 469 aa5.55□□□□□ -1.52
CSTF1-207ENST00000498689 TXNDC11Q6PKC3 985 aa5.55□□□□□ -1.52
CSTF1-207ENST00000498689 CYP2U1Q7Z449 544 aa5.55□□□□□ -1.52
CSTF1-207ENST00000498689 DDX53Q86TM3 631 aaKnown RBP5.55□□□□□ -1.52
CSTF1-207ENST00000498689 VSIG10LQ86VR7 867 aa5.55□□□□□ -1.52
CSTF1-207ENST00000498689 ZNF280BQ86YH2 543 aa5.55□□□□□ -1.52
CSTF1-207ENST00000498689 ING5Q8WYH8 240 aa5.55□□□□□ -1.52
CSTF1-207ENST00000498689 GPKOWQ92917 476 aaPredicted RBP eCLIP5.55□□□□□ -1.52
CSTF1-207ENST00000498689 TMEM169Q96HH4 297 aa5.55□□□□□ -1.52
CSTF1-207ENST00000498689 SPATA33Q96N06 139 aa5.55□□□□□ -1.52
CSTF1-207ENST00000498689 GTPBP2Q9BX10 602 aaKnown RBP5.55□□□□□ -1.52
CSTF1-207ENST00000498689 SENP2Q9HC62 589 aa5.55□□□□□ -1.52
CSTF1-207ENST00000498689 DCP1AQ9NPI6 582 aaPredicted RBP5.55□□□□□ -1.52
CSTF1-207ENST00000498689 RGS18Q9NS28 235 aa5.55□□□□□ -1.52
CSTF1-207ENST00000498689 ISY1Q9ULR0 285 aaKnown RBP5.55□□□□□ -1.52
CSTF1-207ENST00000498689 IGSF9BQ9UPX0 1349 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 NUP210Q8TEM1 1887 aaPredicted RBP5.54□□□□□ -1.52
CSTF1-207ENST00000498689 C8BP07358 591 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 ATXN1LP0C7T5 689 aaKnown RBP5.54□□□□□ -1.52
CSTF1-207ENST00000498689 GBP1P32455 592 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 ZAP70P43403 619 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 STAT2P52630 851 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 CLDN6P56747 220 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 LMAN2Q12907 356 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 GORABQ5T7V8 394 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 CYP26C1Q6V0L0 522 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 RNF207Q6ZRF8 634 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 STK11IPQ8N1F8 1099 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 LRRC43Q8N309 656 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 HDDC3Q8N4P3 179 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 FAM26EQ8N5C1 309 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 TSC1Q92574 1164 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 DNASE1L2Q92874 299 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 CCDC17Q96LX7 622 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 HHIPQ96QV1 700 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 TMEM117Q9H0C3 514 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 FAM49AQ9H0Q0 323 aaPredicted RBP5.54□□□□□ -1.52
CSTF1-207ENST00000498689 ATP6V0A4Q9HBG4 840 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 CHST12Q9NRB3 414 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 NYAP2Q9P242 653 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 EVLQ9UI08 416 aaPredicted RBP5.54□□□□□ -1.52
CSTF1-207ENST00000498689 APOBEC2Q9Y235 224 aaKnown RBP5.54□□□□□ -1.52
CSTF1-207ENST00000498689 PCDHB9Q9Y5E1 797 aa5.54□□□□□ -1.52
CSTF1-207ENST00000498689 ZFP37Q9Y6Q3 630 aaPredicted RBP5.54□□□□□ -1.52
CSTF1-207ENST00000498689 MYO18AQ92614 2054 aaKnown RBP5.54□□□□□ -1.52
CSTF1-207ENST00000498689 BAZ2BQ9UIF8 2168 aaKnown RBP5.53□□□□□ -1.52
CSTF1-207ENST00000498689 ARID2Q68CP9 1835 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 NCANO14594 1321 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 CCDC163A0A0D9SF12 145 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 TEX28O15482 410 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 PRKAB2O43741 272 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 OPHN1O60890 802 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 ATP9AO75110 1047 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 IDH1O75874 414 aaKnown RBP5.53□□□□□ -1.52
CSTF1-207ENST00000498689 GGPS1O95749 300 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 ICAM1P05362 532 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 RNF224P0DH78 156 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 FDX1P10109 184 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 GNAT1P11488 350 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 HLA-EP13747 358 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 FCARP24071 287 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 DCTP40126 519 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 DHPSP49366 369 aaPredicted RBP5.53□□□□□ -1.52
CSTF1-207ENST00000498689 MMP16P51512 607 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 POLGP54098 1239 aaPredicted RBP5.53□□□□□ -1.52
CSTF1-207ENST00000498689 RARSP54136 660 aaKnown RBP5.53□□□□□ -1.52
CSTF1-207ENST00000498689 IKQ13123 557 aaPredicted RBP5.53□□□□□ -1.52
CSTF1-207ENST00000498689 GIT2Q14161 759 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 BMS1Q14692 1282 aaKnown RBP5.53□□□□□ -1.52
CSTF1-207ENST00000498689 CELF3Q5SZQ8 465 aaKnown RBP5.53□□□□□ -1.52
CSTF1-207ENST00000498689 MARCH8Q5T0T0 291 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 SLFN13Q68D06 897 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 PDXDC1Q6P996 788 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 C16orf86Q6ZW13 317 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 KCTD1Q719H9 257 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 SLC24A5Q71RS6 500 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 ARMCX6Q7L4S7 300 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 PALB2Q86YC2 1186 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 GPIHBP1Q8IV16 184 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 NPAS3Q8IXF0 933 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 MINDY1Q8N5J2 469 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 DNERQ8NFT8 737 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 TBC1D5Q92609 795 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 NAF1Q96HR8 494 aaKnown RBP5.53□□□□□ -1.52
CSTF1-207ENST00000498689 IGSF21Q96ID5 467 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 TAAR1Q96RJ0 339 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 USB1Q9BQ65 265 aaKnown RBP5.53□□□□□ -1.52
CSTF1-207ENST00000498689 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.53□□□□□ -1.52
CSTF1-207ENST00000498689 NUSAP1Q9BXS6 441 aaKnown RBP5.53□□□□□ -1.52
CSTF1-207ENST00000498689 EMILIN2Q9BXX0 1053 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 USP44Q9H0E7 712 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 BRD9Q9H8M2 597 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 ZNF334Q9HCZ1 680 aaPredicted RBP5.53□□□□□ -1.52
CSTF1-207ENST00000498689 TMEM161AQ9NX61 479 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 COL20A1Q9P218 1284 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 SEPT3Q9UH03 358 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 MRVI1Q9Y6F6 885 aa5.53□□□□□ -1.52
CSTF1-207ENST00000498689 A1L4Q6 167 aa5.52□□□□□ -1.53
CSTF1-207ENST00000498689 DENND3A2RUS2 1198 aa5.52□□□□□ -1.53
CSTF1-207ENST00000498689 CBFA2T3O75081 653 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms