RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 SPON1Q9HCB6 807 aa5.75□□□□□ -1.49
SMC4-227ENST00000497984 SPTLC3Q9NUV7 552 aa5.75□□□□□ -1.49
SMC4-227ENST00000497984 ZMYM3Q14202 1370 aa5.75□□□□□ -1.49
SMC4-227ENST00000497984 TMEM127O75204 238 aa5.74□□□□□ -1.49
SMC4-227ENST00000497984 LMO1P25800 156 aa5.74□□□□□ -1.49
SMC4-227ENST00000497984 LSP1P33241 339 aa5.74□□□□□ -1.49
SMC4-227ENST00000497984 TRIM25Q14258 630 aaKnown RBP5.74□□□□□ -1.49
SMC4-227ENST00000497984 TCEA2Q15560 299 aa5.74□□□□□ -1.49
SMC4-227ENST00000497984 SEPT7Q16181 437 aaKnown RBP5.74□□□□□ -1.49
SMC4-227ENST00000497984 PDCD4Q53EL6 469 aaKnown RBP5.74□□□□□ -1.49
SMC4-227ENST00000497984 LRCH2Q5VUJ6 765 aa5.74□□□□□ -1.49
SMC4-227ENST00000497984 METRNLQ641Q3 311 aa5.74□□□□□ -1.49
SMC4-227ENST00000497984 SYCE2Q6PIF2 218 aa5.74□□□□□ -1.49
SMC4-227ENST00000497984 ABHD15Q6UXT9 468 aa5.74□□□□□ -1.49
SMC4-227ENST00000497984 LCORLQ8N3X6 602 aa5.74□□□□□ -1.49
SMC4-227ENST00000497984 COQ10AQ96MF6 247 aa5.74□□□□□ -1.49
SMC4-227ENST00000497984 GPR101Q96P66 508 aaPredicted RBP5.74□□□□□ -1.49
SMC4-227ENST00000497984 R3HDMLQ9H3Y0 253 aa5.74□□□□□ -1.49
SMC4-227ENST00000497984 ZSWIM4Q9H7M6 989 aa5.74□□□□□ -1.49
SMC4-227ENST00000497984 MARCH11A6NNE9 402 aa5.73□□□□□ -1.49
SMC4-227ENST00000497984 B5MCH6 92 aa5.73□□□□□ -1.49
SMC4-227ENST00000497984 SEC24CP53992 1094 aa5.73□□□□□ -1.49
SMC4-227ENST00000497984 FOXI1Q12951 378 aa5.73□□□□□ -1.49
SMC4-227ENST00000497984 TKFCQ3LXA3 575 aa5.73□□□□□ -1.49
SMC4-227ENST00000497984 C19orf54Q5BKX5 351 aa5.73□□□□□ -1.49
SMC4-227ENST00000497984 FAM102AQ5T9C2 384 aaPredicted RBP5.73□□□□□ -1.49
SMC4-227ENST00000497984 CMTR2Q8IYT2 770 aaKnown RBP5.73□□□□□ -1.49
SMC4-227ENST00000497984 CPEB3Q8NE35 698 aaKnown RBP5.73□□□□□ -1.49
SMC4-227ENST00000497984 SREK1Q8WXA9 508 aaKnown RBP5.73□□□□□ -1.49
SMC4-227ENST00000497984 RSAD2Q8WXG1 361 aa5.73□□□□□ -1.49
SMC4-227ENST00000497984 NINJ1Q92982 152 aa5.73□□□□□ -1.49
SMC4-227ENST00000497984 RNPC3Q96LT9 517 aaKnown RBP5.73□□□□□ -1.49
SMC4-227ENST00000497984 CDC5LQ99459 802 aaKnown RBP5.73□□□□□ -1.49
SMC4-227ENST00000497984 WNT8AQ9H1J5 351 aa5.73□□□□□ -1.49
SMC4-227ENST00000497984 COX11Q9Y6N1 276 aa5.73□□□□□ -1.49
SMC4-227ENST00000497984 COL11A2P13942 1736 aaPredicted RBP5.72□□□□□ -1.49
SMC4-227ENST00000497984 PIPSLA2A3N6 862 aa5.72□□□□□ -1.49
SMC4-227ENST00000497984 UNC119BA6NIH7 251 aa5.72□□□□□ -1.49
SMC4-227ENST00000497984 TBKBP1A7MCY6 615 aa5.72□□□□□ -1.49
SMC4-227ENST00000497984 CLEC2LP0C7M8 214 aa5.72□□□□□ -1.49
SMC4-227ENST00000497984 ADCYAP1R1P41586 468 aa5.72□□□□□ -1.49
SMC4-227ENST00000497984 AVPR1BP47901 424 aa5.72□□□□□ -1.49
SMC4-227ENST00000497984 LSSP48449 732 aa5.72□□□□□ -1.49
SMC4-227ENST00000497984 MEF2AQ02078 507 aaPredicted RBP5.72□□□□□ -1.49
SMC4-227ENST00000497984 CNNM4Q6P4Q7 775 aa5.72□□□□□ -1.49
SMC4-227ENST00000497984 SNX33Q8WV41 574 aa5.72□□□□□ -1.49
SMC4-227ENST00000497984 NEU1Q99519 415 aa5.72□□□□□ -1.49
SMC4-227ENST00000497984 ANO3Q9BYT9 981 aa5.72□□□□□ -1.49
SMC4-227ENST00000497984 ALG13Q9NP73 1137 aaKnown RBP5.72□□□□□ -1.49
SMC4-227ENST00000497984 PRAMEF4O60810 478 aa5.71□□□□□ -1.5
SMC4-227ENST00000497984 ITGA10O75578 1167 aa5.71□□□□□ -1.5
SMC4-227ENST00000497984 RBP3P10745 1247 aa5.71□□□□□ -1.5
SMC4-227ENST00000497984 ZNF37AP17032 561 aaPredicted RBP5.71□□□□□ -1.5
SMC4-227ENST00000497984 GUCY1B3Q02153 619 aa5.71□□□□□ -1.5
SMC4-227ENST00000497984 TP53BP2Q13625 1128 aa5.71□□□□□ -1.5
SMC4-227ENST00000497984 BMT2Q1RMZ1 405 aa5.71□□□□□ -1.5
SMC4-227ENST00000497984 PRR16Q569H4 304 aa5.71□□□□□ -1.5
SMC4-227ENST00000497984 EFCAB12Q6NXP0 572 aa5.71□□□□□ -1.5
SMC4-227ENST00000497984 FRMD7Q6ZUT3 714 aa5.71□□□□□ -1.5
SMC4-227ENST00000497984 RD3Q7Z3Z2 195 aa5.71□□□□□ -1.5
SMC4-227ENST00000497984 OR14C36Q8NHC7 312 aa5.71□□□□□ -1.5
SMC4-227ENST00000497984 ASB10Q8WXI3 467 aa5.71□□□□□ -1.5
SMC4-227ENST00000497984 CEP95Q96GE4 821 aa5.71□□□□□ -1.5
SMC4-227ENST00000497984 ADARB2Q9NS39 739 aaKnown RBP5.71□□□□□ -1.5
SMC4-227ENST00000497984 GPRC5DQ9NZD1 345 aa5.71□□□□□ -1.5
SMC4-227ENST00000497984 KDM1AO60341 852 aa5.7□□□□□ -1.5
SMC4-227ENST00000497984 HKR1P10072 659 aa5.7□□□□□ -1.5
SMC4-227ENST00000497984 EGR2P11161 476 aaPredicted RBP5.7□□□□□ -1.5
SMC4-227ENST00000497984 DDX6P26196 483 aaKnown RBP eCLIP5.7□□□□□ -1.5
SMC4-227ENST00000497984 MGAT1P26572 445 aa5.7□□□□□ -1.5
SMC4-227ENST00000497984 CD38P28907 300 aa5.7□□□□□ -1.5
SMC4-227ENST00000497984 SCNN1BP51168 640 aa5.7□□□□□ -1.5
SMC4-227ENST00000497984 OCRLQ01968 901 aa5.7□□□□□ -1.5
SMC4-227ENST00000497984 CCDC144BQ3MJ40 725 aa5.7□□□□□ -1.5
SMC4-227ENST00000497984 MFSD14BQ5SR56 506 aa5.7□□□□□ -1.5
SMC4-227ENST00000497984 RNF169Q8NCN4 708 aa5.7□□□□□ -1.5
SMC4-227ENST00000497984 MDM1Q8TC05 714 aa5.7□□□□□ -1.5
SMC4-227ENST00000497984 TFAP2CQ92754 450 aa5.7□□□□□ -1.5
SMC4-227ENST00000497984 TARS2Q9BW92 718 aaKnown RBP5.7□□□□□ -1.5
SMC4-227ENST00000497984 PIF1Q9H611 641 aa5.7□□□□□ -1.5
SMC4-227ENST00000497984 MAP3K2Q9Y2U5 619 aa5.7□□□□□ -1.5
SMC4-227ENST00000497984 CDY2AQ9Y6F7 541 aa5.7□□□□□ -1.5
SMC4-227ENST00000497984 SPDEFO95238 335 aa5.69□□□□□ -1.5
SMC4-227ENST00000497984 FKBP9O95302 570 aa5.69□□□□□ -1.5
SMC4-227ENST00000497984 SPATA31D3P0C874 917 aa5.69□□□□□ -1.5
SMC4-227ENST00000497984 CTSSP25774 331 aa5.69□□□□□ -1.5
SMC4-227ENST00000497984 PITRM1Q5JRX3 1037 aa5.69□□□□□ -1.5
SMC4-227ENST00000497984 ABHD17BQ5VST6 288 aa5.69□□□□□ -1.5
SMC4-227ENST00000497984 ZKSCAN2Q63HK3 967 aa5.69□□□□□ -1.5
SMC4-227ENST00000497984 SPATA31D4Q6ZUB0 917 aa5.69□□□□□ -1.5
SMC4-227ENST00000497984 C16orf86Q6ZW13 317 aa5.69□□□□□ -1.5
SMC4-227ENST00000497984 FKBP9P1Q75LS8 142 aa5.69□□□□□ -1.5
SMC4-227ENST00000497984 HOMER1Q86YM7 354 aa5.69□□□□□ -1.5
SMC4-227ENST00000497984 PPM1KQ8N3J5 372 aa5.69□□□□□ -1.5
SMC4-227ENST00000497984 FAM98AQ8NCA5 519 aaKnown RBP5.69□□□□□ -1.5
SMC4-227ENST00000497984 CAVIN3Q969G5 261 aa5.69□□□□□ -1.5
SMC4-227ENST00000497984 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.69□□□□□ -1.54e-34■■■■■ 131.8
SMC4-227ENST00000497984 POGKQ9P215 609 aa5.69□□□□□ -1.5
SMC4-227ENST00000497984 ARHGEF17Q96PE2 2063 aaPredicted RBP5.69□□□□□ -1.5
SMC4-227ENST00000497984 GASTP01350 101 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms