RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 SCGB1D2O95969 90 aa5.03□□□□□ -1.6
CLK1-214ENST00000496205 PRLP01236 227 aa5.03□□□□□ -1.6
CLK1-214ENST00000496205 HNRNPLP14866 589 aaKnown RBP eCLIP5.03□□□□□ -1.6
CLK1-214ENST00000496205 TIGD2Q4W5G0 525 aa5.03□□□□□ -1.6
CLK1-214ENST00000496205 STRIP1Q5VSL9 837 aa5.03□□□□□ -1.6
CLK1-214ENST00000496205 KRT40Q6A162 431 aa5.03□□□□□ -1.6
CLK1-214ENST00000496205 ST8SIA2Q92186 375 aa5.03□□□□□ -1.6
CLK1-214ENST00000496205 INO80BQ9C086 356 aaPredicted RBP5.03□□□□□ -1.6
CLK1-214ENST00000496205 R3HDMLQ9H3Y0 253 aa5.03□□□□□ -1.6
CLK1-214ENST00000496205 TOMM22Q9NS69 142 aa5.03□□□□□ -1.6
CLK1-214ENST00000496205 NCDNQ9UBB6 729 aa5.03□□□□□ -1.6
CLK1-214ENST00000496205 DNAI1Q9UI46 699 aa5.03□□□□□ -1.6
CLK1-214ENST00000496205 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.02□□□□□ -1.61
CLK1-214ENST00000496205 KRTAP29-1A8MX34 341 aaPredicted RBP5.02□□□□□ -1.61
CLK1-214ENST00000496205 AHRRA9YTQ3 701 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 PRPF3O43395 683 aaKnown RBP5.02□□□□□ -1.61
CLK1-214ENST00000496205 TSPAN6O43657 245 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 PCDHGA12O60330 932 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 SCAF4O95104 1147 aaKnown RBP5.02□□□□□ -1.61
CLK1-214ENST00000496205 JUNP05412 331 aaKnown RBP5.02□□□□□ -1.61
CLK1-214ENST00000496205 CD38P28907 300 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 EPHB1P54762 984 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 FAM189BP81408 668 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 OCRLQ01968 901 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 SPIDRQ14159 915 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 PCBP2Q15366 365 aaKnown RBP eCLIP5.02□□□□□ -1.61
CLK1-214ENST00000496205 FAM214AQ32MH5 1076 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 CC2D1AQ6P1N0 951 aaPredicted RBP5.02□□□□□ -1.61
CLK1-214ENST00000496205 Q6YL49 198 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 C11orf74Q86VG3 221 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 CMTM4Q8IZR5 234 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 RTF1Q92541 710 aaKnown RBP5.02□□□□□ -1.61
CLK1-214ENST00000496205 ARL8AQ96BM9 186 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 AHCYL2Q96HN2 611 aaKnown RBP5.02□□□□□ -1.61
CLK1-214ENST00000496205 C16orf92Q96LL3 132 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 WDR92Q96MX6 357 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 PCDHGA9Q9Y5G4 932 aaKnown RBP5.02□□□□□ -1.61
CLK1-214ENST00000496205 PCDHGA8Q9Y5G5 932 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 PCDHGA7Q9Y5G6 932 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 PCDHGA6Q9Y5G7 932 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 PCDHGA3Q9Y5H0 932 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 PCDHGA2Q9Y5H1 932 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 COX11Q9Y6N1 276 aa5.02□□□□□ -1.61
CLK1-214ENST00000496205 HIP1RO75146 1068 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 ULK1O75385 1050 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 MYBL2P10244 700 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 ZEB1P37275 1124 aaPredicted RBP5.01□□□□□ -1.61
CLK1-214ENST00000496205 SCAND1P57086 179 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 SESN3P58005 492 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 PHC1P78364 1004 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 ROM1Q03395 351 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 KLF1Q13351 362 aaPredicted RBP5.01□□□□□ -1.61
CLK1-214ENST00000496205 LRRC32Q14392 662 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 ODF1Q14990 250 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 ZNF610Q8N9Z0 462 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 DYDC2Q96IM9 177 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 ZNF496Q96IT1 587 aaPredicted RBP5.01□□□□□ -1.61
CLK1-214ENST00000496205 MAML3Q96JK9 1138 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 RHOBTB2Q9BYZ6 727 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 PRDM12Q9H4Q4 367 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 PCIF1Q9H4Z3 704 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 CYP4F11Q9HBI6 524 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 ZIM2Q9NZV7 527 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 KCMF1Q9P0J7 381 aa5.01□□□□□ -1.61
CLK1-214ENST00000496205 A0A0A6YYK5 440 aaPredicted RBP5□□□□□ -1.61
CLK1-214ENST00000496205 ABLIM3O94929 683 aa5□□□□□ -1.61
CLK1-214ENST00000496205 CFBP00751 764 aa5□□□□□ -1.61
CLK1-214ENST00000496205 LAG3P18627 525 aa5□□□□□ -1.61
CLK1-214ENST00000496205 GNAT2P19087 354 aa5□□□□□ -1.61
CLK1-214ENST00000496205 KIR2DL3P43628 341 aa5□□□□□ -1.61
CLK1-214ENST00000496205 GPR3P46089 330 aa5□□□□□ -1.61
CLK1-214ENST00000496205 NPEPPSP55786 919 aa5□□□□□ -1.61
CLK1-214ENST00000496205 PIN1Q13526 163 aaPredicted RBP5□□□□□ -1.61
CLK1-214ENST00000496205 ZNF174Q15697 407 aa5□□□□□ -1.61
CLK1-214ENST00000496205 PTPN21Q16825 1174 aa5□□□□□ -1.61
CLK1-214ENST00000496205 DCAF17Q5H9S7 520 aaPredicted RBP5□□□□□ -1.61
CLK1-214ENST00000496205 PAPD7Q5XG87 772 aaKnown RBP5□□□□□ -1.61
CLK1-214ENST00000496205 SLFN12LQ6IEE8 588 aa5□□□□□ -1.61
CLK1-214ENST00000496205 RD3Q7Z3Z2 195 aa5□□□□□ -1.61
CLK1-214ENST00000496205 APBB1IPQ7Z5R6 666 aaPredicted RBP5□□□□□ -1.61
CLK1-214ENST00000496205 ZBTB46Q86UZ6 589 aa5□□□□□ -1.61
CLK1-214ENST00000496205 RASSF3Q86WH2 238 aa5□□□□□ -1.61
CLK1-214ENST00000496205 C1orf162Q8NEQ5 155 aaPredicted RBP5□□□□□ -1.61
CLK1-214ENST00000496205 TGFBRAP1Q8WUH2 860 aa5□□□□□ -1.61
CLK1-214ENST00000496205 CHMP4CQ96CF2 233 aa5□□□□□ -1.61
CLK1-214ENST00000496205 FUBP3Q96I24 572 aaKnown RBP eCLIP5□□□□□ -1.61
CLK1-214ENST00000496205 HAPLN2Q9GZV7 340 aa5□□□□□ -1.61
CLK1-214ENST00000496205 CDH19Q9H159 772 aa5□□□□□ -1.61
CLK1-214ENST00000496205 SERHL2Q9H4I8 314 aa5□□□□□ -1.61
CLK1-214ENST00000496205 AASDHPPTQ9NRN7 309 aa5□□□□□ -1.61
CLK1-214ENST00000496205 POLR3BQ9NW08 1133 aaPredicted RBP5□□□□□ -1.61
CLK1-214ENST00000496205 ANKFY1Q9P2R3 1169 aa5□□□□□ -1.61
CLK1-214ENST00000496205 KDM1AO60341 852 aa4.99□□□□□ -1.61
CLK1-214ENST00000496205 LSP1P33241 339 aa4.99□□□□□ -1.61
CLK1-214ENST00000496205 PTH2RP49190 550 aa4.99□□□□□ -1.61
CLK1-214ENST00000496205 PPP2R5AQ15172 486 aa4.99□□□□□ -1.61
CLK1-214ENST00000496205 ZBTB41Q5SVQ8 909 aa4.99□□□□□ -1.61
CLK1-214ENST00000496205 GPR158Q5T848 1215 aa4.99□□□□□ -1.61
CLK1-214ENST00000496205 NOL8Q76FK4 1167 aaKnown RBP4.99□□□□□ -1.61
CLK1-214ENST00000496205 LMBR1Q8WVP7 490 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms