RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 TLR9Q9NR96 1032 aa9.3□□□□□ -0.92
VPS13B-206ENST00000496144 TBX3O15119 743 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 ADH1AP07327 375 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 OR1G1P47890 313 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 HAUS6Q7Z4H7 955 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 TRIM9Q9C026 710 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 NT5C3AQ9H0P0 336 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 CNTNAP2Q9UHC6 1331 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 NCAM2O15394 837 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 EEF1GP26641 437 aaKnown RBP9.29□□□□□ -0.92
VPS13B-206ENST00000496144 SOWAHDA6NJG2 315 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 SOX1O00570 391 aaPredicted RBP9.29□□□□□ -0.92
VPS13B-206ENST00000496144 RBM23Q86U06 439 aaKnown RBP9.29□□□□□ -0.92
VPS13B-206ENST00000496144 CNGA4Q8IV77 575 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 SLC43A3Q8NBI5 491 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 ANKRD20A12PQ8NF67 263 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 SLC38A7Q9NVC3 462 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 KIF20AO95235 890 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 ERVK-21P61565 698 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 PLD1Q13393 1074 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 KIZQ2M2Z5 673 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 IQCEQ6IPM2 695 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 TAB2Q9NYJ8 693 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 PRKAG3Q9UGI9 489 aa9.29□□□□□ -0.92
VPS13B-206ENST00000496144 BICDL2A1A5D9 508 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 CXCL14O95715 111 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 CASP14P31944 242 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 NKX3-2P78367 333 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 TTI2Q6NXR4 508 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 MOXD1Q6UVY6 613 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 SV2BQ7L1I2 683 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 OTOP3Q7RTS5 596 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 CEP57Q86XR8 500 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 TRIM50Q86XT4 487 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 OSMRQ99650 979 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 BLOC1S4Q9NUP1 217 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 CYP3A7-CYP3A51PA0A087WV96 503 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 CYP3A7P24462 503 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 CLUL1Q15846 466 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 MAPK6Q16659 721 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 HYIQ5T013 277 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 ZNF507Q8TCN5 953 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 ABHD10Q9NUJ1 306 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 CGNQ9P2M7 1197 aaKnown RBP9.28□□□□□ -0.92
VPS13B-206ENST00000496144 LRWD1Q9UFC0 647 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 FANCGO15287 622 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 SLU7O95391 586 aaKnown RBP9.28□□□□□ -0.92
VPS13B-206ENST00000496144 EOMESO95936 686 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 LRG1P02750 347 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 PBX2P40425 430 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 EPC2Q52LR7 807 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 IRF2BP1Q8IU81 584 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 GJD3Q8N144 294 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 P2RX5Q93086 422 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 FAM212AQ96EL1 285 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 SHDQ96IW2 340 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 TCF25Q9BQ70 676 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 MGAMO43451 1857 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 A0A1W2PQC6 194 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 PSMA7O14818 248 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 USO1O60763 962 aaKnown RBP9.28□□□□□ -0.92
VPS13B-206ENST00000496144 DCAF4L1Q3SXM0 396 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 RPGRIP1Q96KN7 1286 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 DUSP9Q99956 384 aaKnown RBP9.28□□□□□ -0.92
VPS13B-206ENST00000496144 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.28□□□□□ -0.92
VPS13B-206ENST00000496144 TMEM161AQ9NX61 479 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 PADI3Q9ULW8 664 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 ST3GAL5Q9UNP4 418 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 MAPK8IP1Q9UQF2 711 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 COL4A3BPQ9Y5P4 624 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 HARSP12081 509 aaKnown RBP9.28□□□□□ -0.92
VPS13B-206ENST00000496144 CASQ1P31415 396 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 EFNA5P52803 228 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 HSDL1Q3SXM5 330 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 CCDC62Q6P9F0 684 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 HAS1Q92839 578 aa9.28□□□□□ -0.92
VPS13B-206ENST00000496144 LGALS16A8MUM7 142 aa9.27□□□□□ -0.92
VPS13B-206ENST00000496144 VTNP04004 478 aa9.27□□□□□ -0.92
VPS13B-206ENST00000496144 ZNF200P98182 395 aaPredicted RBP9.27□□□□□ -0.92
VPS13B-206ENST00000496144 UBXN1Q04323 297 aa9.27□□□□□ -0.92
VPS13B-206ENST00000496144 ARHGAP15Q53QZ3 475 aa9.27□□□□□ -0.92
VPS13B-206ENST00000496144 UNC13DQ70J99 1090 aa9.27□□□□□ -0.92
VPS13B-206ENST00000496144 FAM114A1Q8IWE2 563 aa9.27□□□□□ -0.92
VPS13B-206ENST00000496144 KIAA0895Q8NCT3 520 aa9.27□□□□□ -0.92
VPS13B-206ENST00000496144 PPP1R13LQ8WUF5 828 aa9.27□□□□□ -0.92
VPS13B-206ENST00000496144 LARP4BQ92615 738 aaKnown RBP9.27□□□□□ -0.92
VPS13B-206ENST00000496144 MBOAT7Q96N66 472 aa9.27□□□□□ -0.92
VPS13B-206ENST00000496144 VPS16Q9H269 839 aa9.27□□□□□ -0.92
VPS13B-206ENST00000496144 CYP3A4P08684 503 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 HOXB8P17481 243 aaPredicted RBP9.27□□□□□ -0.93
VPS13B-206ENST00000496144 NRIP1P48552 1158 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 ETF1P62495 437 aaKnown RBP9.27□□□□□ -0.93
VPS13B-206ENST00000496144 ASIC1P78348 528 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 ECM1Q16610 540 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 NOMO2Q5JPE7 1267 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 FBXO47Q5MNV8 452 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 MAEAQ7L5Y9 396 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 THEM5Q8N1Q8 247 aa9.27□□□□□ -0.93
VPS13B-206ENST00000496144 MAGEC2Q9UBF1 373 aaPredicted RBP9.27□□□□□ -0.93
VPS13B-206ENST00000496144 Q4G0T1 1027 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms