RNA–Protein interactions for RNA: ENST00000496143.5

PPM1F-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 4

Gene PPM1F, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-208ENST00000496143 FOXD4L5Q5VV16 416 aaPredicted RBP23.36■■□□□ 1.33
PPM1F-208ENST00000496143 RRAGBQ5VZM2 374 aa23.36■■□□□ 1.33
PPM1F-208ENST00000496143 ZNF280BQ86YH2 543 aa23.36■■□□□ 1.33
PPM1F-208ENST00000496143 LINC00301Q8NCQ3 95 aa23.36■■□□□ 1.33
PPM1F-208ENST00000496143 FOXD4L4Q8WXT5 416 aaPredicted RBP23.36■■□□□ 1.33
PPM1F-208ENST00000496143 CLIC6Q96NY7 704 aa23.36■■□□□ 1.33
PPM1F-208ENST00000496143 DNAJB4Q9UDY4 337 aa23.36■■□□□ 1.33
PPM1F-208ENST00000496143 FAN1Q9Y2M0 1017 aa23.36■■□□□ 1.33
PPM1F-208ENST00000496143 PPP6R2O75170 966 aa23.35■■□□□ 1.33
PPM1F-208ENST00000496143 TBCAO75347 108 aaKnown RBP23.35■■□□□ 1.33
PPM1F-208ENST00000496143 DDHD2O94830 711 aa23.35■■□□□ 1.33
PPM1F-208ENST00000496143 NRIP1P48552 1158 aa23.35■■□□□ 1.33
PPM1F-208ENST00000496143 KCNQ1P51787 676 aa23.35■■□□□ 1.33
PPM1F-208ENST00000496143 AFF1P51825 1210 aaKnown RBP23.35■■□□□ 1.33
PPM1F-208ENST00000496143 GRIK3Q13003 919 aa23.35■■□□□ 1.33
PPM1F-208ENST00000496143 SMC1AQ14683 1233 aaKnown RBP23.35■■□□□ 1.33
PPM1F-208ENST00000496143 CTC1Q2NKJ3 1217 aa23.35■■□□□ 1.33
PPM1F-208ENST00000496143 ARSHQ5FYA8 562 aa23.35■■□□□ 1.33
PPM1F-208ENST00000496143 PLPP4Q5VZY2 271 aa23.35■■□□□ 1.33
PPM1F-208ENST00000496143 ATL3Q6DD88 541 aa23.35■■□□□ 1.33
PPM1F-208ENST00000496143 CCDC73Q6ZRK6 1079 aa23.35■■□□□ 1.33
PPM1F-208ENST00000496143 ADGRD2Q7Z7M1 963 aa23.35■■□□□ 1.33
PPM1F-208ENST00000496143 DDX53Q86TM3 631 aaKnown RBP23.35■■□□□ 1.33
PPM1F-208ENST00000496143 EFHBQ8N7U6 833 aa23.35■■□□□ 1.33
PPM1F-208ENST00000496143 ZFP42Q96MM3 310 aa23.35■■□□□ 1.33
PPM1F-208ENST00000496143 REEP2Q9BRK0 252 aa23.35■■□□□ 1.33
PPM1F-208ENST00000496143 FAM50BQ9Y247 325 aa23.35■■□□□ 1.33
PPM1F-208ENST00000496143 A0A0C4DFX4 3053 aa23.34■■□□□ 1.33
PPM1F-208ENST00000496143 NPHP3-ACAD11A0A0J9YXS1 232 aa23.34■■□□□ 1.33
PPM1F-208ENST00000496143 SRGAP2BP0DMP2 458 aa23.34■■□□□ 1.33
PPM1F-208ENST00000496143 BMP1P13497 986 aa23.34■■□□□ 1.33
PPM1F-208ENST00000496143 ABCD1P33897 745 aa23.34■■□□□ 1.33
PPM1F-208ENST00000496143 EEF1DP3Q658K8 133 aa23.34■■□□□ 1.33
PPM1F-208ENST00000496143 USP49Q70CQ1 688 aa23.34■■□□□ 1.33
PPM1F-208ENST00000496143 RBM23Q86U06 439 aaKnown RBP23.34■■□□□ 1.33
PPM1F-208ENST00000496143 ADAMTS19Q8TE59 1207 aa23.34■■□□□ 1.33
PPM1F-208ENST00000496143 ACO2Q99798 780 aaKnown RBP23.34■■□□□ 1.33
PPM1F-208ENST00000496143 PARVGQ9HBI0 331 aa23.34■■□□□ 1.33
PPM1F-208ENST00000496143 TFIP11Q9UBB9 837 aaKnown RBP23.34■■□□□ 1.33
PPM1F-208ENST00000496143 USP20Q9Y2K6 914 aa23.34■■□□□ 1.33
PPM1F-208ENST00000496143 EDN1P05305 212 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 NDUFV1P49821 464 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 CACNB1Q02641 598 aaPredicted RBP23.33■■□□□ 1.33
PPM1F-208ENST00000496143 DSC1Q08554 894 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 ADAM15Q13444 863 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 GIT2Q14161 759 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 BECN1Q14457 450 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 ZNF568Q3ZCX4 644 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 COLGALT2Q8IYK4 626 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 VPS52Q8N1B4 723 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 MYCT1Q8N699 235 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 TMEM87AQ8NBN3 555 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 TMEM161BQ8NDZ6 487 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 TCHPQ9BT92 498 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 SNTG2Q9NY99 539 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 KLK14Q9P0G3 267 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 CFAP45Q9UL16 551 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 PCDHGC5Q9Y5F6 944 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 REV3LO60673 3130 aa23.33■■□□□ 1.33
PPM1F-208ENST00000496143 MYO7AQ13402 2215 aa23.32■■□□□ 1.32
PPM1F-208ENST00000496143 H3BQ06 376 aaPredicted RBP23.32■■□□□ 1.32
PPM1F-208ENST00000496143 NRP1O14786 923 aa23.32■■□□□ 1.32
PPM1F-208ENST00000496143 RECQL4O94761 1208 aa23.32■■□□□ 1.32
PPM1F-208ENST00000496143 MAPTP10636 758 aaKnown RBP23.32■■□□□ 1.32
PPM1F-208ENST00000496143 CA8P35219 290 aa23.32■■□□□ 1.32
PPM1F-208ENST00000496143 GTF2F1P35269 517 aaKnown RBP eCLIP23.32■■□□□ 1.32
PPM1F-208ENST00000496143 STAT6P42226 847 aa23.32■■□□□ 1.32
PPM1F-208ENST00000496143 OR1G1P47890 313 aa23.32■■□□□ 1.32
PPM1F-208ENST00000496143 ZNF131P52739 623 aa23.32■■□□□ 1.32
PPM1F-208ENST00000496143 NCKAP1LP55160 1127 aa23.32■■□□□ 1.32
PPM1F-208ENST00000496143 DUSP6Q16828 381 aa23.32■■□□□ 1.32
PPM1F-208ENST00000496143 SV2BQ7L1I2 683 aa23.32■■□□□ 1.32
PPM1F-208ENST00000496143 TMEM173Q86WV6 379 aaPredicted RBP23.32■■□□□ 1.32
PPM1F-208ENST00000496143 KCNG4Q8TDN1 519 aa23.32■■□□□ 1.32
PPM1F-208ENST00000496143 LRRC15Q8TF66 581 aa23.32■■□□□ 1.32
PPM1F-208ENST00000496143 CCDC94Q9BW85 323 aaPredicted RBP23.32■■□□□ 1.32
PPM1F-208ENST00000496143 TARS2Q9BW92 718 aaKnown RBP23.32■■□□□ 1.32
PPM1F-208ENST00000496143 ZHX3Q9H4I2 956 aa23.32■■□□□ 1.32
PPM1F-208ENST00000496143 ATG2AQ2TAZ0 1938 aa23.31■■□□□ 1.32
PPM1F-208ENST00000496143 B4GALT3O60512 393 aa23.31■■□□□ 1.32
PPM1F-208ENST00000496143 MCF2P10911 925 aa23.31■■□□□ 1.32
PPM1F-208ENST00000496143 YARSP54577 528 aaKnown RBP23.31■■□□□ 1.32
PPM1F-208ENST00000496143 MPZL3Q6UWV2 235 aa23.31■■□□□ 1.32
PPM1F-208ENST00000496143 ZPBP2Q6X784 338 aa23.31■■□□□ 1.32
PPM1F-208ENST00000496143 TAS1R3Q7RTX0 852 aa23.31■■□□□ 1.32
PPM1F-208ENST00000496143 MRPL43Q8N983 215 aaKnown RBP23.31■■□□□ 1.32
PPM1F-208ENST00000496143 UHRF1Q96T88 793 aaPredicted RBP23.31■■□□□ 1.32
PPM1F-208ENST00000496143 COLEC11Q9BWP8 271 aa23.31■■□□□ 1.32
PPM1F-208ENST00000496143 ZBP1Q9H171 429 aa23.31■■□□□ 1.32
PPM1F-208ENST00000496143 TOPORSQ9NS56 1045 aaPredicted RBP23.31■■□□□ 1.32
PPM1F-208ENST00000496143 MIOSQ9NXC5 875 aa23.31■■□□□ 1.32
PPM1F-208ENST00000496143 GDAQ9Y2T3 454 aa23.31■■□□□ 1.32
PPM1F-208ENST00000496143 PRG3Q9Y2Y8 225 aaPredicted RBP23.31■■□□□ 1.32
PPM1F-208ENST00000496143 K7ENM7 598 aa23.3■■□□□ 1.32
PPM1F-208ENST00000496143 TRAK2O60296 914 aa23.3■■□□□ 1.32
PPM1F-208ENST00000496143 CUTAO60888 179 aa23.3■■□□□ 1.32
PPM1F-208ENST00000496143 TOM1L1O75674 476 aa23.3■■□□□ 1.32
PPM1F-208ENST00000496143 CXCL14O95715 111 aa23.3■■□□□ 1.32
PPM1F-208ENST00000496143 THP07101 528 aa23.3■■□□□ 1.32
PPM1F-208ENST00000496143 CTSAP10619 480 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms