RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 ACTR2P61160 394 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 PRKCEQ02156 737 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 MYPNQ86TC9 1320 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 CD302Q8IX05 232 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 BSNDQ8WZ55 320 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 KAT5Q92993 513 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 KLRG1Q96E93 195 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 SYNGAP1Q96PV0 1343 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 RAB17Q9H0T7 212 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 RAB20Q9NX57 234 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 AMACRQ9UHK6 382 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 COG5Q9UP83 839 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 PPP2R3BQ9Y5P8 575 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 ALG6Q9Y672 507 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 SGPL1O95470 568 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 ITGA4P13612 1032 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 SCP2P22307 547 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 SP4Q02446 784 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 CYP24A1Q07973 514 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 XKR3Q5GH77 459 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 ABHD15Q6UXT9 468 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 ENOSF1Q7L5Y1 443 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 NOP9Q86U38 636 aaKnown RBP11.93□□□□□ -0.5
CMSS1-208ENST00000496116 CCDC60Q8IWA6 550 aaPredicted RBP11.93□□□□□ -0.5
CMSS1-208ENST00000496116 KREMEN1Q96MU8 473 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 RPS6KC1Q96S38 1066 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 KIAA1586Q9HCI6 787 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 PDLIM7Q9NR12 457 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 FAM114A2Q9NRY5 505 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 NOCTQ9UK39 431 aaKnown RBP11.93□□□□□ -0.5
CMSS1-208ENST00000496116 MYH9P35579 1960 aaKnown RBP11.92□□□□□ -0.5
CMSS1-208ENST00000496116 GOLGA6L10A6NI86 522 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 SPATA31C2B4DYI2 1134 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 BHMG1C9JSJ3 638 aaPredicted RBP11.92□□□□□ -0.5
CMSS1-208ENST00000496116 CYP26A1O43174 497 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 SHOX2O60902 331 aaPredicted RBP11.92□□□□□ -0.5
CMSS1-208ENST00000496116 ZC3H11AO75152 810 aaKnown RBP eCLIP11.92□□□□□ -0.5
CMSS1-208ENST00000496116 MTA2O94776 668 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 STBD1O95210 358 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 KRT14P02533 472 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 CYP11B1P15538 503 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 HSPA6P17066 643 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 PTENP60484 403 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 TRADDQ15628 312 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 DCAF12L1Q5VU92 463 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 PRAMEF18Q5VWM3 479 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 SLC47A2Q86VL8 602 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 HELQQ8TDG4 1101 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 SEMA4DQ92854 862 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 ZNF233A6NK53 670 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 KIAA0391O15091 583 aaKnown RBP11.92□□□□□ -0.5
CMSS1-208ENST00000496116 SUPT20HL2P0C7V6 817 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 DLATP10515 647 aaKnown RBP11.92□□□□□ -0.5
CMSS1-208ENST00000496116 ECHS1P30084 290 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 POLGP54098 1239 aaPredicted RBP11.92□□□□□ -0.5
CMSS1-208ENST00000496116 SOX10P56693 466 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 CDR2Q01850 454 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 STRN3Q13033 797 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 MTMR3Q13615 1198 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 STXBP2Q15833 593 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 SUPT20HL1Q3ZLR7 823 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 TTMPQ5BVD1 217 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 NOL9Q5SY16 702 aaKnown RBP11.92□□□□□ -0.5
CMSS1-208ENST00000496116 SLC39A4Q6P5W5 647 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.92□□□□□ -0.5
CMSS1-208ENST00000496116 SV2AQ7L0J3 742 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 C1orf131Q8NDD1 294 aaKnown RBP11.92□□□□□ -0.5
CMSS1-208ENST00000496116 DNERQ8NFT8 737 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 TAS1R2Q8TE23 839 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 POP1Q99575 1024 aaKnown RBP11.92□□□□□ -0.5
CMSS1-208ENST00000496116 CAPS2Q9BXY5 557 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 POLR3FQ9H1D9 316 aaPredicted RBP11.92□□□□□ -0.5
CMSS1-208ENST00000496116 WNT8AQ9H1J5 351 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 XPNPEP1Q9NQW7 623 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 ARHGAP28Q9P2N2 729 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 CD2APQ9Y5K6 639 aa11.92□□□□□ -0.5
CMSS1-208ENST00000496116 DOCK5Q9H7D0 1870 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 ADGRA3Q8IWK6 1321 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 SPDYE16A6NNV3 312 aaPredicted RBP11.91□□□□□ -0.5
CMSS1-208ENST00000496116 TTI1O43156 1089 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 MMEP08473 750 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 CHRNB2P17787 502 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 LIG4P49917 911 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 FMO1Q01740 532 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 GCNT1Q02742 428 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 MTERF2Q49AM1 385 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 SEL1L2Q5TEA6 688 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 LRIG3Q6UXM1 1119 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 LRRC31Q6UY01 552 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 CHST13Q8NET6 341 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 SEC14L1Q92503 715 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 ARL8AQ96BM9 186 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 PCDHB18PQ96TA0 734 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 ZSWIM1Q9BR11 485 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.91□□□□□ -0.53e-7■■■■■ 83.3
CMSS1-208ENST00000496116 UVRAGQ9P2Y5 699 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 GTF3C4Q9UKN8 822 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 FZD1Q9UP38 647 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 ZNF541Q9H0D2 1346 aa11.91□□□□□ -0.5
CMSS1-208ENST00000496116 EXTL3O43909 919 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms