RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 POMGNT1Q8WZA1 660 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 COPS5Q92905 334 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 SLC35C1Q96A29 364 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 LENG1Q96BZ8 264 aaPredicted RBP11.15□□□□□ -0.62
HDAC3-214ENST00000495485 EIF3CQ99613 913 aaKnown RBP11.15□□□□□ -0.62
HDAC3-214ENST00000495485 TUT1Q9H6E5 874 aaKnown RBP11.15□□□□□ -0.62
HDAC3-214ENST00000495485 NHEJ1Q9H9Q4 299 aaPredicted RBP11.15□□□□□ -0.62
HDAC3-214ENST00000495485 GPRC5CQ9NQ84 441 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 HSPBP1Q9NZL4 362 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 ARHGAP28Q9P2N2 729 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 TRPC6Q9Y210 931 aa11.15□□□□□ -0.62
HDAC3-214ENST00000495485 COL1A2P08123 1366 aa11.15□□□□□ -0.63
HDAC3-214ENST00000495485 TMEM150BA6NC51 233 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 MYADML2A6NDP7 307 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 LRRIQ4A6NIV6 560 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 HAS3O00219 553 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 HNRNPDLO14979 420 aaKnown RBP11.14□□□□□ -0.63
HDAC3-214ENST00000495485 AKR1B10O60218 316 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 EVI5O60447 810 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 PARNO95453 639 aaKnown RBP11.14□□□□□ -0.63
HDAC3-214ENST00000495485 LGALS2P05162 132 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 ATP4AP20648 1035 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 CASQ1P31415 396 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 GTF2H1P32780 548 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 CASP4P49662 377 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 POLR2FP61218 127 aaKnown RBP11.14□□□□□ -0.63
HDAC3-214ENST00000495485 CDC42EP1Q00587 391 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 BEX3Q00994 111 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 MYL7Q01449 175 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 KCNMA1Q12791 1236 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 ASIC2Q16515 512 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 C10orf76Q5T2E6 689 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 KLHDC7AQ5VTJ3 777 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 CXCL17Q6UXB2 119 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 RAD9BQ6WBX8 426 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 ZNF662Q6ZS27 426 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 KSR1Q8IVT5 923 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 GPD1LQ8N335 351 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 CCDC155Q8N6L0 562 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 DIS3LQ8TF46 1054 aaKnown RBP11.14□□□□□ -0.63
HDAC3-214ENST00000495485 BORCS6Q96GS4 357 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 SH2D3AQ9BRG2 576 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 BCAS3Q9H6U6 928 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 XPNPEP1Q9NQW7 623 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 GCNT4Q9P109 453 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 PRKAG2Q9UGJ0 569 aa11.14□□□□□ -0.63
HDAC3-214ENST00000495485 NRCAMQ92823 1304 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 EVPLQ92817 2033 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 RRN3P2A6NIE6 340 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 ZNF233A6NK53 670 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 LRRC53A6NM62 1247 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 USP27XA6NNY8 438 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 CAND2O75155 1236 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 PIGRP01833 764 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 FERP16591 822 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 PON1P27169 355 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 STAT1P42224 750 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 MATR3P43243 847 aaKnown RBP eCLIP11.13□□□□□ -0.63
HDAC3-214ENST00000495485 PSEN2P49810 448 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 KLK7P49862 253 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 POU5F1BQ06416 359 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 KLHL30Q0D2K2 578 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 KIF5AQ12840 1032 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 MAPK8IP2Q13387 824 aaPredicted RBP11.13□□□□□ -0.63
HDAC3-214ENST00000495485 RAPGEF1Q13905 1077 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 MFSD10Q14728 455 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 PLCB4Q15147 1175 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 SURF1Q15526 300 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 TDRD12Q587J7 1177 aaKnown RBP11.13□□□□□ -0.63
HDAC3-214ENST00000495485 TOGARAM2Q6ZUX3 1019 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 C7orf31Q8N865 590 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 RDH13Q8NBN7 331 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 PCYT2Q99447 389 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 C16orf70Q9BSU1 422 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 PCIF1Q9H4Z3 704 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 AIPL1Q9NZN9 384 aa11.13□□□□□ -0.63
HDAC3-214ENST00000495485 RANBP2P49792 3224 aaKnown RBP11.12□□□□□ -0.63
HDAC3-214ENST00000495485 GFPT2O94808 682 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 CLTBP09497 229 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 UCHL3P15374 230 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 HOXC8P31273 242 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 MCCD1P59942 119 aaPredicted RBP11.12□□□□□ -0.63
HDAC3-214ENST00000495485 GNG11P61952 73 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 TUBB4BP68371 445 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 SNRNP35Q16560 246 aaKnown RBP11.12□□□□□ -0.63
HDAC3-214ENST00000495485 MAPK6Q16659 721 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 KIAA0753Q2KHM9 967 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 NBPF20Q3BBV1 942 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 WDR59Q6PJI9 974 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 ZPBP2Q6X784 338 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 MYRIPQ8NFW9 859 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 CAGE1Q8TC20 777 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 BAP1Q92560 729 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 DPF3Q92784 378 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 KAT2BQ92831 832 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 TMEM143Q96AN5 459 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 FNBP1Q96RU3 617 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 CHP1Q99653 195 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 CRACR2AQ9BSW2 395 aa11.12□□□□□ -0.63
HDAC3-214ENST00000495485 MRPL4Q9BYD3 311 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms