RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	IMPACT	Q9P2X3	320 aa		10.06	□□□□□ -0.8
PCDH15-223	ENST00000495484	GPR182	O15218	404 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	TLR3	O15455	904 aa	Known RBP	10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	N4BP1	O75113	896 aa	Known RBP	10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	AFP	P02771	609 aa	Known RBP	10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	ARF4	P18085	180 aa	Predicted RBP	10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	VAMP7	P51809	220 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	CETN1	Q12798	172 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	KCNH2	Q12809	1159 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	SURF1	Q15526	300 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	DCAF4L1	Q3SXM0	396 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	FAM26D	Q5JW98	314 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	MIIP	Q5JXC2	388 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	C1orf53	Q5VUE5	145 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	TCERG1L	Q5VWI1	586 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	SPECC1L	Q69YQ0	1117 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	NOTUM	Q6P988	496 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	RDH13	Q8NBN7	331 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	SAAL1	Q96ER3	474 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	CCDC51	Q96ER9	411 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	ZBTB45	Q96K62	511 aa	Predicted RBP	10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	MFSD14A	Q96MC6	490 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	FAM213A	Q9BRX8	229 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	SENP6	Q9GZR1	1112 aa	Predicted RBP	10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	CDHR5	Q9HBB8	845 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	CDY2A	Q9Y6F7	541 aa		10.05	□□□□□ -0.8
PCDH15-223	ENST00000495484	ITIH6	Q6UXX5	1313 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	GOLGA8IP	A6NC78	632 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	GOLGA8J	A6NMD2	632 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	P4HA2	O15460	535 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	TEX33	O43247	280 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	B4GALT5	O43286	388 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	B4GALT4	O60513	344 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	CSDE1	O75534	798 aa	Known RBP	10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	RPS6KA5	O75582	802 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	EDN1	P05305	212 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	GTF2H1	P32780	548 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	BFSP2	Q13515	415 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	DCAF17	Q5H9S7	520 aa	Predicted RBP	10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	SLC27A1	Q6PCB7	646 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	CBWD2	Q8IUF1	395 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	SLC35C1	Q96A29	364 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	ERGIC2	Q96RQ1	377 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	NUP58	Q9BVL2	599 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	TRPV6	Q9H1D0	765 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	CHST12	Q9NRB3	414 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	AGPAT5	Q9NUQ2	364 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	USP20	Q9Y2K6	914 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	CENPF	P49454	3210 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	GTPBP10	A4D1E9	387 aa	Known RBP	10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	TTLL13P	A6NNM8	815 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	DCDC2C	A8MYV0	355 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	ABLIM1	O14639	778 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	CHRNA1	P02708	482 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	PTMA	P06454	111 aa	Known RBP	10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	TPM1	P09493	284 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	CLTA	P09496	248 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	PBX1	P40424	430 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	AP3M2	P53677	418 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	GSDMD	P57764	484 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	CYP24A1	Q07973	514 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	RBL2	Q08999	1139 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	MGAT3	Q09327	533 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	TRIM14	Q14142	442 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	PSMD6	Q15008	389 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	TRIM71	Q2Q1W2	868 aa	Known RBP	10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	SLC39A5	Q6ZMH5	540 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	ZBTB33	Q86T24	672 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	PARD3B	Q8TEW8	1205 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	TOX2	Q96NM4	488 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	FNBP1	Q96RU3	617 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	HAPLN2	Q9GZV7	340 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	CDT1	Q9H211	546 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	PDZD7	Q9H5P4	517 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	INTS13	Q9NVM9	706 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	RBAK	Q9NYW8	714 aa	Predicted RBP	10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	MYH11	P35749	1972 aa		10.04	□□□□□ -0.8
PCDH15-223	ENST00000495484	PMM2	O15305	246 aa		10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	CTSH	P09668	335 aa		10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	HARS	P12081	509 aa	Known RBP	10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	COL6A1	P12109	1028 aa		10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	CKB	P12277	381 aa		10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	HOXA11	P31270	313 aa	Predicted RBP	10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	ACOT2	P49753	483 aa		10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	ANKRD33	Q7Z3H0	272 aa		10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	TMC6	Q7Z403	805 aa		10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	FAM126B	Q8IXS8	530 aa		10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	TMEM40	Q8WWA1	233 aa		10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	WNT8B	Q93098	351 aa		10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	CPB2	Q96IY4	423 aa		10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	TRIM6	Q9C030	488 aa	Predicted RBP	10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	CPSF3	Q9UKF6	684 aa	Known RBP	10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	PIN4	Q9Y237	131 aa	Known RBP	10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	NOC2L	Q9Y3T9	749 aa	Known RBP	10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	KAT6A	Q92794	2004 aa		10.03	□□□□□ -0.8
PCDH15-223	ENST00000495484	PITPNM1	O00562	1244 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	FAM189A1	O60320	539 aa		10.02	□□□□□ -0.8
PCDH15-223	ENST00000495484	IL18RAP	O95256	599 aa		10.02	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms