RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 FAM98AQ8NCA5 519 aaKnown RBP5.89□□□□□ -1.47
VPS50-219ENST00000495039 CAGE1Q8TC20 777 aa5.89□□□□□ -1.47
VPS50-219ENST00000495039 ASB10Q8WXI3 467 aa5.89□□□□□ -1.47
VPS50-219ENST00000495039 ADAM2Q99965 735 aa5.89□□□□□ -1.47
VPS50-219ENST00000495039 ORAI3Q9BRQ5 295 aa5.89□□□□□ -1.47
VPS50-219ENST00000495039 IFT57Q9NWB7 429 aa5.89□□□□□ -1.47
VPS50-219ENST00000495039 POGKQ9P215 609 aa5.89□□□□□ -1.47
VPS50-219ENST00000495039 MSRAQ9UJ68 235 aa5.89□□□□□ -1.47
VPS50-219ENST00000495039 MARCH11A6NNE9 402 aa5.88□□□□□ -1.47
VPS50-219ENST00000495039 KRTAP29-1A8MX34 341 aaPredicted RBP5.88□□□□□ -1.47
VPS50-219ENST00000495039 SPDEFO95238 335 aa5.88□□□□□ -1.47
VPS50-219ENST00000495039 CLEC2LP0C7M8 214 aa5.88□□□□□ -1.47
VPS50-219ENST00000495039 PLA2G5P39877 138 aa5.88□□□□□ -1.47
VPS50-219ENST00000495039 PTH2RP49190 550 aa5.88□□□□□ -1.47
VPS50-219ENST00000495039 LRFN3Q9BTN0 628 aa5.88□□□□□ -1.47
VPS50-219ENST00000495039 RNF181Q9P0P0 153 aa5.88□□□□□ -1.47
VPS50-219ENST00000495039 TLK1Q9UKI8 766 aa5.88□□□□□ -1.47
VPS50-219ENST00000495039 FPGT-TNNI3KV9GXZ4 949 aa5.88□□□□□ -1.47
VPS50-219ENST00000495039 TBKBP1A7MCY6 615 aa5.87□□□□□ -1.47
VPS50-219ENST00000495039 EGR2P11161 476 aaPredicted RBP5.87□□□□□ -1.47
VPS50-219ENST00000495039 SDSP20132 328 aa5.87□□□□□ -1.47
VPS50-219ENST00000495039 UBE3CQ15386 1083 aa5.87□□□□□ -1.47
VPS50-219ENST00000495039 TFAP2CQ92754 450 aa5.87□□□□□ -1.47
VPS50-219ENST00000495039 ZNF496Q96IT1 587 aaPredicted RBP5.87□□□□□ -1.47
VPS50-219ENST00000495039 C8orf37Q96NL8 207 aa5.87□□□□□ -1.47
VPS50-219ENST00000495039 FRMD4BQ9Y2L6 1034 aa5.87□□□□□ -1.47
VPS50-219ENST00000495039 USP15Q9Y4E8 981 aaPredicted RBP5.87□□□□□ -1.47
VPS50-219ENST00000495039 LTA4HP09960 611 aaKnown RBP5.86□□□□□ -1.47
VPS50-219ENST00000495039 ITGAMP11215 1152 aa5.86□□□□□ -1.47
VPS50-219ENST00000495039 PPARAQ07869 468 aa5.86□□□□□ -1.47
VPS50-219ENST00000495039 RESTQ13127 1097 aa5.86□□□□□ -1.47
VPS50-219ENST00000495039 FAM102AQ5T9C2 384 aaPredicted RBP5.86□□□□□ -1.47
VPS50-219ENST00000495039 ANKS6Q68DC2 871 aa5.86□□□□□ -1.47
VPS50-219ENST00000495039 KIF18BQ86Y91 864 aa5.86□□□□□ -1.47
VPS50-219ENST00000495039 SLC44A3Q8N4M1 653 aa5.86□□□□□ -1.47
VPS50-219ENST00000495039 DUSP26Q9BV47 211 aa5.86□□□□□ -1.47
VPS50-219ENST00000495039 MAGEC2Q9UBF1 373 aaPredicted RBP5.86□□□□□ -1.47
VPS50-219ENST00000495039 MAP3K2Q9Y2U5 619 aa5.86□□□□□ -1.47
VPS50-219ENST00000495039 ZMYM3Q14202 1370 aa5.85□□□□□ -1.47
VPS50-219ENST00000495039 MAST3O60307 1309 aa5.85□□□□□ -1.47
VPS50-219ENST00000495039 PRAMEF4O60810 478 aa5.85□□□□□ -1.47
VPS50-219ENST00000495039 CDKL5O76039 1030 aa5.85□□□□□ -1.47
VPS50-219ENST00000495039 F2P00734 622 aa5.85□□□□□ -1.47
VPS50-219ENST00000495039 FOSP01100 380 aaPredicted RBP5.85□□□□□ -1.47
VPS50-219ENST00000495039 ITGB6P18564 788 aa5.85□□□□□ -1.47
VPS50-219ENST00000495039 MPLP40238 635 aa5.85□□□□□ -1.47
VPS50-219ENST00000495039 MEF2AQ02078 507 aaPredicted RBP5.85□□□□□ -1.47
VPS50-219ENST00000495039 BMT2Q1RMZ1 405 aa5.85□□□□□ -1.47
VPS50-219ENST00000495039 GPR158Q5T848 1215 aa5.85□□□□□ -1.47
VPS50-219ENST00000495039 SP5Q6BEB4 398 aaPredicted RBP5.85□□□□□ -1.47
VPS50-219ENST00000495039 RNF169Q8NCN4 708 aa5.85□□□□□ -1.47
VPS50-219ENST00000495039 PMFBP1Q8TBY8 1022 aa5.85□□□□□ -1.47
VPS50-219ENST00000495039 RSAD2Q8WXG1 361 aa5.85□□□□□ -1.47
VPS50-219ENST00000495039 ALG13Q9NP73 1137 aaKnown RBP5.85□□□□□ -1.47
VPS50-219ENST00000495039 TESQ9UGI8 421 aaKnown RBP5.85□□□□□ -1.47
VPS50-219ENST00000495039 NUMBLQ9Y6R0 609 aa5.85□□□□□ -1.47
VPS50-219ENST00000495039 ITGA10O75578 1167 aa5.84□□□□□ -1.47
VPS50-219ENST00000495039 RFPL3O75679 317 aa5.84□□□□□ -1.47
VPS50-219ENST00000495039 FDXRP22570 491 aa5.84□□□□□ -1.47
VPS50-219ENST00000495039 DSG1Q02413 1049 aa5.84□□□□□ -1.47
VPS50-219ENST00000495039 ZNF362Q5T0B9 420 aaPredicted RBP5.84□□□□□ -1.47
VPS50-219ENST00000495039 PDZD4Q76G19 769 aaPredicted RBP5.84□□□□□ -1.47
VPS50-219ENST00000495039 ZFP28Q8NHY6 868 aa5.84□□□□□ -1.47
VPS50-219ENST00000495039 CHTF18Q8WVB6 975 aa5.84□□□□□ -1.47
VPS50-219ENST00000495039 KIAA1586Q9HCI6 787 aa5.84□□□□□ -1.47
VPS50-219ENST00000495039 THG1LQ9NWX6 298 aaKnown RBP5.84□□□□□ -1.47
VPS50-219ENST00000495039 COL11A2P13942 1736 aaPredicted RBP5.83□□□□□ -1.48
VPS50-219ENST00000495039 PRSS38A1L453 326 aa5.83□□□□□ -1.48
VPS50-219ENST00000495039 E9PSI1 815 aa5.83□□□□□ -1.48
VPS50-219ENST00000495039 CFIP05156 583 aa5.83□□□□□ -1.48
VPS50-219ENST00000495039 SQSTM1Q13501 440 aa5.83□□□□□ -1.48
VPS50-219ENST00000495039 C19orf54Q5BKX5 351 aa5.83□□□□□ -1.48
VPS50-219ENST00000495039 BHLHA9Q7RTU4 235 aa5.83□□□□□ -1.48
VPS50-219ENST00000495039 NXPE1Q8N323 547 aa5.83□□□□□ -1.48
VPS50-219ENST00000495039 WNT8AQ9H1J5 351 aa5.83□□□□□ -1.48
VPS50-219ENST00000495039 EVLQ9UI08 416 aaPredicted RBP5.83□□□□□ -1.48
VPS50-219ENST00000495039 ATP11BQ9Y2G3 1177 aa5.83□□□□□ -1.48
VPS50-219ENST00000495039 MYADML2A6NDP7 307 aa5.82□□□□□ -1.48
VPS50-219ENST00000495039 PPP1R12AO14974 1030 aaPredicted RBP5.82□□□□□ -1.48
VPS50-219ENST00000495039 TGM5O43548 720 aa5.82□□□□□ -1.48
VPS50-219ENST00000495039 KPNA6O60684 536 aa5.82□□□□□ -1.48
VPS50-219ENST00000495039 GASTP01350 101 aa5.82□□□□□ -1.48
VPS50-219ENST00000495039 IGLV2-14P01704 120 aa5.82□□□□□ -1.48
VPS50-219ENST00000495039 KPNA1P52294 538 aaPredicted RBP5.82□□□□□ -1.48
VPS50-219ENST00000495039 PHC1P78364 1004 aa5.82□□□□□ -1.48
VPS50-219ENST00000495039 NHLH1Q02575 133 aa5.82□□□□□ -1.48
VPS50-219ENST00000495039 PABPC4Q13310 644 aaKnown RBP eCLIP5.82□□□□□ -1.48
VPS50-219ENST00000495039 SPDYE7PQ495Y7 208 aa5.82□□□□□ -1.48
VPS50-219ENST00000495039 METRNLQ641Q3 311 aa5.82□□□□□ -1.48
VPS50-219ENST00000495039 ZNF610Q8N9Z0 462 aa5.82□□□□□ -1.48
VPS50-219ENST00000495039 MDM1Q8TC05 714 aa5.82□□□□□ -1.48
VPS50-219ENST00000495039 SNX33Q8WV41 574 aa5.82□□□□□ -1.48
VPS50-219ENST00000495039 NEU1Q99519 415 aa5.82□□□□□ -1.48
VPS50-219ENST00000495039 GPRC5DQ9NZD1 345 aa5.82□□□□□ -1.48
VPS50-219ENST00000495039 PRSS50Q9UI38 385 aa5.82□□□□□ -1.48
VPS50-219ENST00000495039 ZNF891A8MT65 544 aaPredicted RBP5.81□□□□□ -1.48
VPS50-219ENST00000495039 LSP1P33241 339 aa5.81□□□□□ -1.48
VPS50-219ENST00000495039 ZNF169Q14929 603 aaPredicted RBP5.81□□□□□ -1.48
VPS50-219ENST00000495039 AGAP9Q5VTM2 703 aa5.81□□□□□ -1.48
VPS50-219ENST00000495039 OR14C36Q8NHC7 312 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms