RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 DHX38Q92620 1227 aaKnown RBP12.07□□□□□ -0.48
CHMP3-209ENST00000494623 TATDN2Q93075 761 aa12.07□□□□□ -0.48
CHMP3-209ENST00000494623 TMBIM4Q9HC24 238 aa12.07□□□□□ -0.48
CHMP3-209ENST00000494623 FAM114A2Q9NRY5 505 aa12.07□□□□□ -0.48
CHMP3-209ENST00000494623 GINM1Q9NU53 330 aa12.07□□□□□ -0.48
CHMP3-209ENST00000494623 RAB20Q9NX57 234 aa12.07□□□□□ -0.48
CHMP3-209ENST00000494623 USP20Q9Y2K6 914 aa12.07□□□□□ -0.48
CHMP3-209ENST00000494623 ZBTB7AO95365 584 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 CALCAP01258 141 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 MYZAPP0CAP1 466 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 CYP11B1P15538 503 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 HPDP32754 393 aaPredicted RBP12.06□□□□□ -0.48
CHMP3-209ENST00000494623 FMO1Q01740 532 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 SLC39A4Q6P5W5 647 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 KDM7AQ6ZMT4 941 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 CPNE8Q86YQ8 564 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 ZNF280CQ8ND82 737 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 HELQQ8TDG4 1101 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 NSUN6Q8TEA1 469 aaKnown RBP12.06□□□□□ -0.48
CHMP3-209ENST00000494623 SHC3Q92529 594 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 KIFAP3Q92845 792 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 BICD1Q96G01 975 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 NT5C1BQ96P26 610 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 WRNIP1Q96S55 665 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 FAM213AQ9BRX8 229 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 PI4K2AQ9BTU6 479 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 TMEM8AQ9HCN3 771 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 PICK1Q9NRD5 415 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 SEPT9Q9UHD8 586 aaPredicted RBP12.06□□□□□ -0.48
CHMP3-209ENST00000494623 PNMA2Q9UL42 364 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 LOXHD1Q8IVV2 1947 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 H0YGN5 161 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 HNRNPDLO14979 420 aaKnown RBP12.06□□□□□ -0.48
CHMP3-209ENST00000494623 RGS20O76081 388 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 HADHBP55084 474 aaKnown RBP12.06□□□□□ -0.48
CHMP3-209ENST00000494623 C11orf63Q6NUN7 778 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 LRIG3Q6UXM1 1119 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 SV2AQ7L0J3 742 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 SCYL3Q8IZE3 742 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 FBXL13Q8NEE6 735 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 ATP6V0A1Q93050 837 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 GPRASP2Q96D09 838 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 NTPCRQ9BSD7 190 aaKnown RBP12.06□□□□□ -0.48
CHMP3-209ENST00000494623 NUP85Q9BW27 656 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 RAB17Q9H0T7 212 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 SNX24Q9Y343 169 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 NFS1Q9Y697 457 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 PFASO15067 1338 aa12.06□□□□□ -0.48
CHMP3-209ENST00000494623 MIF4GDA9UHW6 222 aaKnown RBP12.05□□□□□ -0.48
CHMP3-209ENST00000494623 HMGB1P1B2RPK0 211 aaPredicted RBP12.05□□□□□ -0.48
CHMP3-209ENST00000494623 NFKBIEO00221 500 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 PMM2O15305 246 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 PSAPP07602 524 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 FDX1P10109 184 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 GZMAP12544 262 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 KRT5P13647 590 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 KCNA2P16389 499 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 PTPRAP18433 802 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 ZNF844Q08AG5 666 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 SF3B2Q13435 895 aaKnown RBP12.05□□□□□ -0.48
CHMP3-209ENST00000494623 LLGL1Q15334 1064 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 XRRA1Q6P2D8 792 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 RDM1Q8NG50 284 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 IPO4Q8TEX9 1081 aaKnown RBP12.05□□□□□ -0.48
CHMP3-209ENST00000494623 ZNF653Q96CK0 615 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 C18orf8Q96DM3 657 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 MFSD14AQ96MC6 490 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 ZSWIM1Q9BR11 485 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 ERP44Q9BS26 406 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 TRPC6Q9Y210 931 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 ATP8A1Q9Y2Q0 1164 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 ADGRA3Q8IWK6 1321 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 MAFGO15525 162 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 SPOPO43791 374 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 STBD1O95210 358 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 DSG3P32926 999 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 GPC3P51654 580 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 CYP24A1Q07973 514 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 TMEM132BQ14DG7 1078 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 DCAF15Q66K64 600 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 TMC3Q7Z5M5 1100 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 ZNF564Q8TBZ8 553 aaPredicted RBP12.05□□□□□ -0.48
CHMP3-209ENST00000494623 SPIRE2Q8WWL2 714 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 SEC14L1Q92503 715 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 MAGOHBQ96A72 148 aaKnown RBP12.05□□□□□ -0.48
CHMP3-209ENST00000494623 SENP7Q9BQF6 1050 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 AS3MTQ9HBK9 375 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 JPH1Q9HDC5 661 aaPredicted RBP12.05□□□□□ -0.48
CHMP3-209ENST00000494623 FEZ2Q9UHY8 353 aaPredicted RBP12.05□□□□□ -0.48
CHMP3-209ENST00000494623 COQ4Q9Y3A0 265 aa12.05□□□□□ -0.48
CHMP3-209ENST00000494623 EBAG9O00559 213 aa12.04□□□□□ -0.48
CHMP3-209ENST00000494623 PYGMP11217 842 aa12.04□□□□□ -0.48
CHMP3-209ENST00000494623 PEX5P50542 639 aa12.04□□□□□ -0.48
CHMP3-209ENST00000494623 PDE6CP51160 858 aa12.04□□□□□ -0.48
CHMP3-209ENST00000494623 PLTPP55058 493 aa12.04□□□□□ -0.48
CHMP3-209ENST00000494623 TGFB2P61812 414 aa12.04□□□□□ -0.48
CHMP3-209ENST00000494623 CDR2Q01850 454 aa12.04□□□□□ -0.48
CHMP3-209ENST00000494623 PPP2R5EQ16537 467 aa12.04□□□□□ -0.48
CHMP3-209ENST00000494623 MTERF2Q49AM1 385 aa12.04□□□□□ -0.48
CHMP3-209ENST00000494623 ODF2Q5BJF6 829 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms