RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 UIMC1Q96RL1 719 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 NKIRAS1Q9NYS0 192 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 ADGRA3Q8IWK6 1321 aa10.84□□□□□ -0.67
LINC00488-201ENST00000494582 PODXLO00592 558 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 GSC2O15499 205 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 EDF1O60869 148 aaKnown RBP10.83□□□□□ -0.68
LINC00488-201ENST00000494582 ASLP04424 464 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 FUT4P22083 530 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 COILP38432 576 aaPredicted RBP10.83□□□□□ -0.68
LINC00488-201ENST00000494582 NONOQ15233 471 aaKnown RBP eCLIP10.83□□□□□ -0.68
LINC00488-201ENST00000494582 PPP2R5EQ16537 467 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 DBN1Q16643 649 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 TMEM119Q4V9L6 283 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 HS2ST1Q7LGA3 356 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 CLNKQ7Z7G1 428 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 NEK8Q86SG6 692 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 ZC3H3Q8IXZ2 948 aaKnown RBP10.83□□□□□ -0.68
LINC00488-201ENST00000494582 RUNDC3BQ96NL0 473 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 CYLDQ9NQC7 956 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 EURLQ9NYK6 297 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 STX18Q9P2W9 335 aaKnown RBP10.83□□□□□ -0.68
LINC00488-201ENST00000494582 PARP2Q9UGN5 583 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 RPL26L1Q9UNX3 145 aaKnown RBP10.83□□□□□ -0.68
LINC00488-201ENST00000494582 ALG6Q9Y672 507 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 COL1A1P02452 1464 aaPredicted RBP10.83□□□□□ -0.68
LINC00488-201ENST00000494582 UBR2Q8IWV8 1755 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 CACNA1SQ13698 1873 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 TMEM110-MUSTN1A8MSY1 372 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 DCTN3O75935 186 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 TDP2O95551 362 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 TTC4O95801 387 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 ITGA2BP08514 1039 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 TMEM253P0C7T8 217 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 PYGMP11217 842 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 CDK7P50613 346 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 RASSF2P50749 326 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 PLOD1Q02809 727 aaPredicted RBP10.83□□□□□ -0.68
LINC00488-201ENST00000494582 P3H1Q32P28 736 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 EPM2AIP1Q7L775 607 aaPredicted RBP10.83□□□□□ -0.68
LINC00488-201ENST00000494582 NLRP9Q7RTR0 991 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 CCDC105Q8IYK2 499 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 RIBC1Q8N443 379 aaPredicted RBP10.83□□□□□ -0.68
LINC00488-201ENST00000494582 PNMA1Q8ND90 353 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 DENND1AQ8TEH3 1009 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 SNX29Q8TEQ0 813 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 CDK5RAP3Q96JB5 506 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 AGBL1Q96MI9 1066 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 SYT11Q9BT88 431 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 BRIP1Q9BX63 1249 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 METTL14Q9HCE5 456 aaKnown RBP10.83□□□□□ -0.68
LINC00488-201ENST00000494582 UBN1Q9NPG3 1134 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 NINJ2Q9NZG7 142 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 ZFP69BQ9UJL9 534 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 CHMP2BQ9UQN3 213 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 NIP7Q9Y221 180 aaKnown RBP eCLIP10.83□□□□□ -0.68
LINC00488-201ENST00000494582 DIS3Q9Y2L1 958 aaKnown RBP10.83□□□□□ -0.68
LINC00488-201ENST00000494582 COMMD3-BMI1R4GMX3 469 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 PASKQ96RG2 1323 aa10.83□□□□□ -0.68
LINC00488-201ENST00000494582 MAP3K7O43318 606 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 OATP04181 439 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 NR2F2P24468 414 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 RINLQ6ZS11 566 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 OTOAQ7RTW8 1153 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 NAT14Q8WUY8 206 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 PTCD3Q96EY7 689 aaKnown RBP10.82□□□□□ -0.68
LINC00488-201ENST00000494582 HIC2Q96JB3 615 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 NR1H4Q96RI1 486 aaPredicted RBP10.82□□□□□ -0.68
LINC00488-201ENST00000494582 SUDS3Q9H7L9 328 aaPredicted RBP10.82□□□□□ -0.68
LINC00488-201ENST00000494582 LGALS13Q9UHV8 139 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 ATP8B3O60423 1300 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 A0A1B0GUL6 1792 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 FAM47DPA6NHR8 397 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 TSPY2A6NKD2 308 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 LRP5O75197 1615 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 HOXD13P35453 343 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 IL9RQ01113 521 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 TRIP13Q15645 432 aaPredicted RBP10.82□□□□□ -0.68
LINC00488-201ENST00000494582 TMEM266Q2M3C6 531 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 DCAF17Q5H9S7 520 aaPredicted RBP10.82□□□□□ -0.68
LINC00488-201ENST00000494582 ANKRD36CQ5JPF3 1778 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 IZUMO2Q6UXV1 221 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 MROH5Q6ZUA9 1318 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 ARHGAP18Q8N392 663 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 RFWD2Q8NHY2 731 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 MAML1Q92585 1016 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 ADAM33Q9BZ11 813 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 BCAS3Q9H6U6 928 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 NPHS2Q9NP85 383 aa10.82□□□□□ -0.68
LINC00488-201ENST00000494582 UMODL1Q5DID0 1318 aa10.81□□□□□ -0.68
LINC00488-201ENST00000494582 A0A0J9YVX5 310 aa10.81□□□□□ -0.68
LINC00488-201ENST00000494582 RASA4BC9J798 803 aa10.81□□□□□ -0.68
LINC00488-201ENST00000494582 RASA4O43374 803 aa10.81□□□□□ -0.68
LINC00488-201ENST00000494582 PFDN1O60925 122 aa10.81□□□□□ -0.68
LINC00488-201ENST00000494582 USP1O94782 785 aa10.81□□□□□ -0.68
LINC00488-201ENST00000494582 VAV1P15498 845 aa10.81□□□□□ -0.68
LINC00488-201ENST00000494582 IVDP26440 423 aa10.81□□□□□ -0.68
LINC00488-201ENST00000494582 CASP4P49662 377 aa10.81□□□□□ -0.68
LINC00488-201ENST00000494582 NAPAP54920 295 aa10.81□□□□□ -0.68
LINC00488-201ENST00000494582 THOC5Q13769 683 aaKnown RBP10.81□□□□□ -0.68
LINC00488-201ENST00000494582 GRM4Q14833 912 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms