RNA–Protein interactions for RNA: ENST00000494195.1

HMGB3P14-201, Transcript of high mobility group box 3 pseudogene 14, humanhuman

BASIC

Gene HMGB3P14, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P14-201ENST00000494195 PPM1NQ8N819 430 aa9.52□□□□□ -0.89
HMGB3P14-201ENST00000494195 OR7D4Q8NG98 312 aa9.52□□□□□ -0.89
HMGB3P14-201ENST00000494195 HOXB13Q92826 284 aaPredicted RBP9.52□□□□□ -0.89
HMGB3P14-201ENST00000494195 TEKT5Q96M29 485 aa9.52□□□□□ -0.89
HMGB3P14-201ENST00000494195 CEP89Q96ST8 783 aa9.52□□□□□ -0.89
HMGB3P14-201ENST00000494195 TUBD1Q9UJT1 453 aa9.52□□□□□ -0.89
HMGB3P14-201ENST00000494195 DNM3Q9UQ16 869 aa9.52□□□□□ -0.89
HMGB3P14-201ENST00000494195 MFAP3LO75121 409 aa9.51□□□□□ -0.89
HMGB3P14-201ENST00000494195 GNAT2P19087 354 aa9.51□□□□□ -0.89
HMGB3P14-201ENST00000494195 HIBADHP31937 336 aaKnown RBP9.51□□□□□ -0.89
HMGB3P14-201ENST00000494195 FAM171A2A8MVW0 826 aa9.5□□□□□ -0.89
HMGB3P14-201ENST00000494195 ADCY6O43306 1168 aa9.5□□□□□ -0.89
HMGB3P14-201ENST00000494195 ENDOD1O94919 500 aa9.5□□□□□ -0.89
HMGB3P14-201ENST00000494195 EFCAB2Q5VUJ9 269 aa9.5□□□□□ -0.89
HMGB3P14-201ENST00000494195 ELOA2Q8IYF1 753 aaPredicted RBP9.5□□□□□ -0.89
HMGB3P14-201ENST00000494195 THEMISQ8N1K5 641 aaPredicted RBP9.5□□□□□ -0.89
HMGB3P14-201ENST00000494195 MDM1Q8TC05 714 aa9.5□□□□□ -0.89
HMGB3P14-201ENST00000494195 ST8SIA2Q92186 375 aa9.5□□□□□ -0.89
HMGB3P14-201ENST00000494195 CHMP4CQ96CF2 233 aa9.5□□□□□ -0.89
HMGB3P14-201ENST00000494195 GIT1Q9Y2X7 761 aa9.5□□□□□ -0.89
HMGB3P14-201ENST00000494195 C1QTNF3-AMACRE9PGA6 284 aa9.49□□□□□ -0.89
HMGB3P14-201ENST00000494195 WASP42768 502 aa9.49□□□□□ -0.89
HMGB3P14-201ENST00000494195 SLC16A1P53985 500 aa9.49□□□□□ -0.89
HMGB3P14-201ENST00000494195 PER3P56645 1201 aa9.49□□□□□ -0.89
HMGB3P14-201ENST00000494195 PRAMEF14Q5SWL7 426 aa9.49□□□□□ -0.89
HMGB3P14-201ENST00000494195 ZBTB46Q86UZ6 589 aa9.49□□□□□ -0.89
HMGB3P14-201ENST00000494195 GSPT2Q8IYD1 628 aaKnown RBP9.49□□□□□ -0.89
HMGB3P14-201ENST00000494195 TRMT2AQ8IZ69 625 aaKnown RBP9.49□□□□□ -0.89
HMGB3P14-201ENST00000494195 MDGA1Q8NFP4 955 aa9.49□□□□□ -0.89
HMGB3P14-201ENST00000494195 NRG4Q8WWG1 115 aa9.49□□□□□ -0.89
HMGB3P14-201ENST00000494195 UHRF1Q96T88 793 aaPredicted RBP9.49□□□□□ -0.89
HMGB3P14-201ENST00000494195 GPR20Q99678 358 aa9.49□□□□□ -0.89
HMGB3P14-201ENST00000494195 PDCD2LQ9BRP1 358 aa9.49□□□□□ -0.89
HMGB3P14-201ENST00000494195 SAP30BPQ9UHR5 308 aaKnown RBP9.49□□□□□ -0.89
HMGB3P14-201ENST00000494195 ZMYM3Q14202 1370 aa9.49□□□□□ -0.89
HMGB3P14-201ENST00000494195 ACRV1P26436 265 aa9.48□□□□□ -0.89
HMGB3P14-201ENST00000494195 SREBF1P36956 1147 aa9.48□□□□□ -0.89
HMGB3P14-201ENST00000494195 NEK2P51955 445 aa9.48□□□□□ -0.89
HMGB3P14-201ENST00000494195 ODF1Q14990 250 aa9.48□□□□□ -0.89
HMGB3P14-201ENST00000494195 SEPT2Q15019 361 aa9.48□□□□□ -0.89
HMGB3P14-201ENST00000494195 DOK3Q7L591 496 aa9.48□□□□□ -0.89
HMGB3P14-201ENST00000494195 FAM83AQ86UY5 434 aa9.48□□□□□ -0.89
HMGB3P14-201ENST00000494195 PQLC1Q8N2U9 271 aa9.48□□□□□ -0.89
HMGB3P14-201ENST00000494195 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.48□□□□□ -0.89
HMGB3P14-201ENST00000494195 SNUPNO95149 360 aaKnown RBP9.47□□□□□ -0.89
HMGB3P14-201ENST00000494195 PTPN7P35236 360 aa9.47□□□□□ -0.89
HMGB3P14-201ENST00000494195 RECQLP46063 649 aaPredicted RBP9.47□□□□□ -0.89
HMGB3P14-201ENST00000494195 SPDYAQ5MJ70 313 aa9.47□□□□□ -0.89
HMGB3P14-201ENST00000494195 MB21D1Q8N884 522 aa9.47□□□□□ -0.89
HMGB3P14-201ENST00000494195 REPS2Q8NFH8 660 aa9.47□□□□□ -0.89
HMGB3P14-201ENST00000494195 OR2I1PQ8NGU4 316 aa9.47□□□□□ -0.89
HMGB3P14-201ENST00000494195 ATXN2LQ8WWM7 1075 aaKnown RBP9.47□□□□□ -0.89
HMGB3P14-201ENST00000494195 CPPED1Q9BRF8 314 aaPredicted RBP9.47□□□□□ -0.89
HMGB3P14-201ENST00000494195 LANCL2Q9NS86 450 aa9.47□□□□□ -0.89
HMGB3P14-201ENST00000494195 INTUQ9ULD6 942 aa9.47□□□□□ -0.89
HMGB3P14-201ENST00000494195 KRTAP23-1A1A580 65 aa9.46□□□□□ -0.9
HMGB3P14-201ENST00000494195 B5MCH6 92 aa9.46□□□□□ -0.9
HMGB3P14-201ENST00000494195 FLT3LGP49771 235 aa9.46□□□□□ -0.9
HMGB3P14-201ENST00000494195 KRTAP10-2P60368 255 aa9.46□□□□□ -0.9
HMGB3P14-201ENST00000494195 DCAF17Q5H9S7 520 aaPredicted RBP9.46□□□□□ -0.9
HMGB3P14-201ENST00000494195 METTL24Q5JXM2 366 aa9.46□□□□□ -0.9
HMGB3P14-201ENST00000494195 MFSD14BQ5SR56 506 aa9.46□□□□□ -0.9
HMGB3P14-201ENST00000494195 ZNF572Q7Z3I7 529 aaPredicted RBP9.46□□□□□ -0.9
HMGB3P14-201ENST00000494195 DPF2Q92785 391 aa9.46□□□□□ -0.9
HMGB3P14-201ENST00000494195 CEP95Q96GE4 821 aa9.46□□□□□ -0.9
HMGB3P14-201ENST00000494195 C7orf25Q9BPX7 421 aa9.46□□□□□ -0.9
HMGB3P14-201ENST00000494195 LSM14BQ9BX40 385 aaKnown RBP9.46□□□□□ -0.9
HMGB3P14-201ENST00000494195 AURKAIP1Q9NWT8 199 aaPredicted RBP9.46□□□□□ -0.9
HMGB3P14-201ENST00000494195 HDAC5Q9UQL6 1122 aa9.46□□□□□ -0.9
HMGB3P14-201ENST00000494195 ALDH1L1O75891 902 aa9.45□□□□□ -0.9
HMGB3P14-201ENST00000494195 HSP90B1P14625 803 aaKnown RBP9.45□□□□□ -0.9
HMGB3P14-201ENST00000494195 MAN2A2P49641 1150 aa9.45□□□□□ -0.9
HMGB3P14-201ENST00000494195 RABGGTBP53611 331 aa9.45□□□□□ -0.9
HMGB3P14-201ENST00000494195 ADKP55263 362 aaKnown RBP9.45□□□□□ -0.9
HMGB3P14-201ENST00000494195 KIF23Q02241 960 aaPredicted RBP9.45□□□□□ -0.9
HMGB3P14-201ENST00000494195 CRHR2Q13324 411 aa9.45□□□□□ -0.9
HMGB3P14-201ENST00000494195 FAM47AQ5JRC9 791 aa9.45□□□□□ -0.9
HMGB3P14-201ENST00000494195 Q6ZRM9 215 aa9.45□□□□□ -0.9
HMGB3P14-201ENST00000494195 ANKRD13AQ8IZ07 590 aa9.45□□□□□ -0.9
HMGB3P14-201ENST00000494195 SENP6Q9GZR1 1112 aaPredicted RBP9.45□□□□□ -0.9
HMGB3P14-201ENST00000494195 MANSC1Q9H8J5 431 aa9.45□□□□□ -0.9
HMGB3P14-201ENST00000494195 CLCA2Q9UQC9 943 aa9.45□□□□□ -0.9
HMGB3P14-201ENST00000494195 SIK3Q9Y2K2 1263 aa9.45□□□□□ -0.9
HMGB3P14-201ENST00000494195 GUCY1A2P33402 732 aa9.44□□□□□ -0.9
HMGB3P14-201ENST00000494195 SLC6A9P48067 706 aa9.44□□□□□ -0.9
HMGB3P14-201ENST00000494195 SCNN1GP51170 649 aa9.44□□□□□ -0.9
HMGB3P14-201ENST00000494195 SP140Q13342 867 aa9.44□□□□□ -0.9
HMGB3P14-201ENST00000494195 TMEM240Q5SV17 173 aa9.44□□□□□ -0.9
HMGB3P14-201ENST00000494195 C1QL3Q5VWW1 255 aa9.44□□□□□ -0.9
HMGB3P14-201ENST00000494195 HTR3DQ70Z44 454 aa9.44□□□□□ -0.9
HMGB3P14-201ENST00000494195 XYLT1Q86Y38 959 aa9.44□□□□□ -0.9
HMGB3P14-201ENST00000494195 OR52N2Q8NGI0 321 aa9.44□□□□□ -0.9
HMGB3P14-201ENST00000494195 CYFIP2Q96F07 1278 aa9.44□□□□□ -0.9
HMGB3P14-201ENST00000494195 GPR87Q9BY21 358 aa9.44□□□□□ -0.9
HMGB3P14-201ENST00000494195 ATRNL1Q5VV63 1379 aa9.43□□□□□ -0.9
HMGB3P14-201ENST00000494195 GOLGA6L6A8MZA4 724 aa9.43□□□□□ -0.9
HMGB3P14-201ENST00000494195 IL2RBP14784 551 aa9.43□□□□□ -0.9
HMGB3P14-201ENST00000494195 ALOX15P16050 662 aaPredicted RBP9.43□□□□□ -0.9
HMGB3P14-201ENST00000494195 CNGB1Q14028 1251 aaPredicted RBP9.43□□□□□ -0.9
HMGB3P14-201ENST00000494195 RRP1BQ14684 758 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms