RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 XXYLT1Q8NBI6 393 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 CEP63Q96MT8 703 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 FGFBP2Q9BYJ0 223 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 TSPYL2Q9H2G4 693 aaPredicted RBP16.28■□□□□ 0.2
ACTB-213ENST00000493945 KCTD10Q9H3F6 313 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 RGS18Q9NS28 235 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 FAM105AQ9NUU6 356 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 MAGEC2Q9UBF1 373 aaPredicted RBP16.28■□□□□ 0.2
ACTB-213ENST00000493945 STYXL1Q9Y6J8 313 aa16.28■□□□□ 0.2
ACTB-213ENST00000493945 PPP1R3GB7ZBB8 358 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 NPTXRO95502 500 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 EOMESO95936 686 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 TPM2P07951 284 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 PRKCSHP14314 528 aaPredicted RBP16.27■□□□□ 0.2
ACTB-213ENST00000493945 SYN1P17600 705 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 PROZP22891 400 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 RGS19P49795 217 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 ZNF445P59923 1031 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 SURF1Q15526 300 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 ANO6Q4KMQ2 910 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 ZBTB33Q86T24 672 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 CD302Q8IX05 232 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 ABI1Q8IZP0 508 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 CSGALNACT2Q8N6G5 542 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 GLIS3Q8NEA6 775 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 TMEM174Q8WUU8 243 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 BPIFA3Q9BQP9 254 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 MKNK1Q9BUB5 465 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 CITO14578 2027 aa16.27■□□□□ 0.2
ACTB-213ENST00000493945 A0A0B4J269 797 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 A0A0U1RQF3 1178 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 ZBBXA8MT70 800 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 GOLGA6L19H0YKK7 550 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 SLC16A3O15427 465 aaKnown RBP16.26■□□□□ 0.19
ACTB-213ENST00000493945 EXTL3O43909 919 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 CLTAP09496 248 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 ITGA4P13612 1032 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 KRT13P13646 458 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 BMP6P22004 513 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 HOXA11P31270 313 aaPredicted RBP16.26■□□□□ 0.19
ACTB-213ENST00000493945 GRM5P41594 1212 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 ZNF165P49910 485 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 CYP2J2P51589 502 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 MYL5Q02045 173 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 KCNA1Q09470 495 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 ADAM9Q13443 819 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 ACAP3Q96P50 834 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 RPS6KC1Q96S38 1066 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 TSPAN18Q96SJ8 248 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 DNAJC25Q9H1X3 360 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 CDT1Q9H211 546 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 ELAC1Q9H777 363 aaKnown RBP16.26■□□□□ 0.19
ACTB-213ENST00000493945 RPF1Q9H9Y2 349 aaKnown RBP16.26■□□□□ 0.19
ACTB-213ENST00000493945 METTL14Q9HCE5 456 aaKnown RBP16.26■□□□□ 0.19
ACTB-213ENST00000493945 HSPBP1Q9NZL4 362 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 PCDHB7Q9Y5E2 793 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 PCDHB2Q9Y5E7 798 aa16.26■□□□□ 0.19
ACTB-213ENST00000493945 RALGAPA2Q2PPJ7 1873 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 CARNS1A5YM72 827 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 ZNF233A6NK53 670 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 MAPK13O15264 365 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 TGFB1I1O43294 461 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 XPOTO43592 962 aaKnown RBP16.25■□□□□ 0.19
ACTB-213ENST00000493945 ZNF623O75123 536 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 CAPN15O75808 1086 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 IL18RAPO95256 599 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 PSMC2P35998 433 aaKnown RBP16.25■□□□□ 0.19
ACTB-213ENST00000493945 MLLT1Q03111 559 aaPredicted RBP16.25■□□□□ 0.19
ACTB-213ENST00000493945 PPP2R3AQ06190 1150 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 SPAG1Q07617 926 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 DSC3Q14574 896 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 CCDC40Q4G0X9 1142 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 ZCWPW2Q504Y3 356 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 CEP135Q66GS9 1140 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 NPAS4Q8IUM7 802 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 ENOX1Q8TC92 643 aaKnown RBP16.25■□□□□ 0.19
ACTB-213ENST00000493945 FAM200AQ8TCP9 573 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 URGCPQ8TCY9 931 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 PTPRHQ9HD43 1115 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 TMEM161AQ9NX61 479 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 TET1Q8NFU7 2136 aa16.25■□□□□ 0.19
ACTB-213ENST00000493945 IKBKBO14920 756 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 CLIC2O15247 247 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 STX10O60499 249 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 CD44P16070 742 aaKnown RBP16.24■□□□□ 0.19
ACTB-213ENST00000493945 ITGB8P26012 769 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 STX17P56962 302 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 SNRNP35Q16560 246 aaKnown RBP16.24■□□□□ 0.19
ACTB-213ENST00000493945 SPATA1Q5VX52 437 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 GLB1LQ6UWU2 654 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 INTS8Q75QN2 995 aaKnown RBP16.24■□□□□ 0.19
ACTB-213ENST00000493945 THNSL1Q8IYQ7 743 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 FNBP1Q96RU3 617 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 SLC9A7Q96T83 725 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 CBWD1Q9BRT8 395 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 MRPL9Q9BYD2 267 aaKnown RBP16.24■□□□□ 0.19
ACTB-213ENST00000493945 TMX1Q9H3N1 280 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 SEMA6BQ9H3T3 888 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 THAP9Q9H5L6 903 aa16.24■□□□□ 0.19
ACTB-213ENST00000493945 PLEKHA5Q9HAU0 1116 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms