RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 INPPL1O15357 1258 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 SOD2P04179 222 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 CYP11B2P19099 503 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 HOXD11P31277 338 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-223ENST00000493618 TRAPPC10P48553 1259 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 FXR2P51116 673 aaKnown RBP eCLIP16.2■□□□□ 0.18
ATG4B-223ENST00000493618 CLCN4P51793 760 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 DSC1Q08554 894 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 PTGDRQ13258 359 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 HAUS3Q68CZ6 603 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 CDCA2Q69YH5 1023 aaPredicted RBP16.2■□□□□ 0.18
ATG4B-223ENST00000493618 ZBTB33Q86T24 672 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 CABP7Q86V35 215 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 HACE1Q8IYU2 909 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 GSTCDQ8NEC7 633 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 B3GALT6Q96L58 329 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 FBXL18Q96ME1 805 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 CXCL16Q9H2A7 254 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 PDZD7Q9H5P4 517 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 KIAA1024Q9UPX6 916 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 GIT1Q9Y2X7 761 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 NR2E1Q9Y466 385 aa16.2■□□□□ 0.18
ATG4B-223ENST00000493618 LILRB3O75022 631 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 PRKCBP05771 671 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 URODP06132 367 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 U2AF2P26368 475 aaKnown RBP eCLIP16.19■□□□□ 0.183e-9■■□□□ 14.1
ATG4B-223ENST00000493618 MTHFRP42898 656 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 PRPF4BQ13523 1007 aaKnown RBP16.19■□□□□ 0.18
ATG4B-223ENST00000493618 RABEP1Q15276 862 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 PTPN21Q16825 1174 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 MCTP1Q6DN14 999 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 PPP4R3CPQ6ZMV5 832 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 PPFIBP1Q86W92 1011 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 DEPTORQ8TB45 409 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 SNX29Q8TEQ0 813 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 PBXIP1Q96AQ6 731 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 RIPOR3Q96MK2 946 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 NECTIN4Q96NY8 510 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 C2orf40Q9H1Z8 148 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 BHMT2Q9H2M3 363 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 FZD8Q9H461 694 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 DDX19AQ9NUU7 478 aaKnown RBP16.19■□□□□ 0.18
ATG4B-223ENST00000493618 SNTG2Q9NY99 539 aa16.19■□□□□ 0.18
ATG4B-223ENST00000493618 ARIH1Q9Y4X5 557 aaPredicted RBP16.19■□□□□ 0.18
ATG4B-223ENST00000493618 VWA8A3KMH1 1905 aa16.18■□□□□ 0.18
ATG4B-223ENST00000493618 E9PMD0 336 aa16.18■□□□□ 0.18
ATG4B-223ENST00000493618 N4BP3O15049 544 aa16.18■□□□□ 0.18
ATG4B-223ENST00000493618 CD2BP2O95400 341 aaKnown RBP16.18■□□□□ 0.18
ATG4B-223ENST00000493618 CDC25AP30304 524 aa16.18■□□□□ 0.18
ATG4B-223ENST00000493618 GLUD2P49448 558 aa16.18■□□□□ 0.18
ATG4B-223ENST00000493618 IL17AQ16552 155 aa16.18■□□□□ 0.18
ATG4B-223ENST00000493618 ATAT1Q5SQI0 421 aa16.18■□□□□ 0.18
ATG4B-223ENST00000493618 EEF1DP3Q658K8 133 aa16.18■□□□□ 0.18
ATG4B-223ENST00000493618 KIAA1841Q6NSI8 718 aa16.18■□□□□ 0.18
ATG4B-223ENST00000493618 PRIMPOLQ96LW4 560 aa16.18■□□□□ 0.18
ATG4B-223ENST00000493618 MFSD14AQ96MC6 490 aa16.18■□□□□ 0.18
ATG4B-223ENST00000493618 RPS6KC1Q96S38 1066 aa16.18■□□□□ 0.18
ATG4B-223ENST00000493618 COLEC11Q9BWP8 271 aa16.18■□□□□ 0.18
ATG4B-223ENST00000493618 CCDC113Q9H0I3 377 aa16.18■□□□□ 0.18
ATG4B-223ENST00000493618 SMOC2Q9H3U7 446 aa16.18■□□□□ 0.18
ATG4B-223ENST00000493618 ZNF318Q5VUA4 2279 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 TEX28O15482 410 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 ST18O60284 1047 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 NR1I2O75469 434 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 EFEMP2O95967 443 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 SPATA31D3P0C874 917 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 NAMPTP43490 491 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 GRIK3Q13003 919 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 MAPK6Q16659 721 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 FAM187BQ17R55 369 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 KIAA0319Q5VV43 1072 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 SPATA31D4Q6ZUB0 917 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 GLYCTKQ8IVS8 523 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 RNF168Q8IYW5 571 aaPredicted RBP16.17■□□□□ 0.18
ATG4B-223ENST00000493618 KREMEN2Q8NCW0 462 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 HASPINQ8TF76 798 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 PAAF1Q9BRP4 392 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 GPR62Q9BZJ7 368 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 SFXN1Q9H9B4 322 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 MAN1C1Q9NR34 630 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 STK39Q9UEW8 545 aa16.17■□□□□ 0.18
ATG4B-223ENST00000493618 CASTOR2A6NHX0 329 aa16.16■□□□□ 0.18
ATG4B-223ENST00000493618 RECQL4O94761 1208 aa16.16■□□□□ 0.18
ATG4B-223ENST00000493618 ASGR2P07307 311 aa16.16■□□□□ 0.18
ATG4B-223ENST00000493618 MUTP22033 750 aa16.16■□□□□ 0.18
ATG4B-223ENST00000493618 SIGLEC14Q08ET2 396 aa16.16■□□□□ 0.18
ATG4B-223ENST00000493618 ZRSR1Q15695 479 aaKnown RBP16.16■□□□□ 0.18
ATG4B-223ENST00000493618 NT5DC1Q5TFE4 455 aa16.16■□□□□ 0.18
ATG4B-223ENST00000493618 FUT10Q6P4F1 479 aa16.16■□□□□ 0.18
ATG4B-223ENST00000493618 GPR149Q86SP6 731 aa16.16■□□□□ 0.18
ATG4B-223ENST00000493618 IGSF22Q8N9C0 903 aa16.16■□□□□ 0.18
ATG4B-223ENST00000493618 TDRD5Q8NAT2 981 aaKnown RBP16.16■□□□□ 0.18
ATG4B-223ENST00000493618 TMX3Q96JJ7 454 aa16.16■□□□□ 0.18
ATG4B-223ENST00000493618 IFT74Q96LB3 600 aa16.16■□□□□ 0.18
ATG4B-223ENST00000493618 GDAQ9Y2T3 454 aa16.16■□□□□ 0.18
ATG4B-223ENST00000493618 PDCD11Q14690 1871 aaKnown RBP16.16■□□□□ 0.18
ATG4B-223ENST00000493618 CITO14578 2027 aa16.16■□□□□ 0.18
ATG4B-223ENST00000493618 ACKR2O00590 384 aa16.15■□□□□ 0.18
ATG4B-223ENST00000493618 PTGESO14684 152 aa16.15■□□□□ 0.18
ATG4B-223ENST00000493618 TADA2AO75478 443 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms