RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 BMP6P22004 513 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 CDH3P22223 829 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 TCEA1P23193 301 aaKnown RBP7.31□□□□□ -1.24
VPS13B-205ENST00000493587 TNFRSF8P28908 595 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 STX2P32856 288 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 SERPINB6P35237 376 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 MAP3K7CLP57077 242 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 NOP14P78316 857 aaKnown RBP7.31□□□□□ -1.24
VPS13B-205ENST00000493587 CDR2Q01850 454 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 E2F2Q14209 437 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 C6orf163Q5TEZ5 329 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 DENND2CQ68D51 928 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 CHST3Q7LGC8 479 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 KRT26Q7Z3Y9 468 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 RASSF3Q86WH2 238 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 ANKRD13BQ86YJ7 626 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 ANKMY2Q8IV38 441 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 KIAA2013Q8IYS2 634 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 COX4I2Q96KJ9 171 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 LRRC37BQ96QE4 947 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 MYD88Q99836 296 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 SEZ6LQ9BYH1 1024 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 NUF2Q9BZD4 464 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 KLHL25Q9H0H3 589 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 GPBP1L1Q9HC44 474 aaPredicted RBP7.31□□□□□ -1.24
VPS13B-205ENST00000493587 GJB4Q9NTQ9 266 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 HMG20BQ9P0W2 317 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 EXOC7Q9UPT5 735 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 SCINQ9Y6U3 715 aa7.31□□□□□ -1.24
VPS13B-205ENST00000493587 ATAD5Q96QE3 1844 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 RCCD1A6NED2 376 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 NUTM2BA6NNL0 878 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-205ENST00000493587 NUTM2EB1AL46 878 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-205ENST00000493587 FAM47E-STBD1D6RA91 191 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 NDC80O14777 642 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 ZBTB11O95625 1053 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-205ENST00000493587 PABPC4LP0CB38 370 aaKnown RBP7.3□□□□□ -1.24
VPS13B-205ENST00000493587 COPB1P53618 953 aaKnown RBP7.3□□□□□ -1.24
VPS13B-205ENST00000493587 EVA1CP58658 441 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 SPAG1Q07617 926 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 KRT31Q15323 416 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 C15orf59Q2T9L4 293 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-205ENST00000493587 CCDC81Q6ZN84 652 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 ZNF804AQ7Z570 1209 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 TTC5Q8N0Z6 440 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 NUP93Q8N1F7 819 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 CFAP61Q8NHU2 1237 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 FERD3LQ96RJ6 166 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 CCDC28BQ9BUN5 200 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 THAP9Q9H5L6 903 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 C12orf4Q9NQ89 552 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 GTF3C4Q9UKN8 822 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 KIAA1257Q9ULG3 409 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 A0A0D9SFI3 127 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 KANSL1LA0AUZ9 987 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 GOLGA8JA6NMD2 632 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 DGKIO75912 1065 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 IFNA8P32881 189 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 RCVRNP35243 200 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 TXKP42681 527 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 STK4Q13043 487 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 PPP2R5CQ13362 524 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 PARP6Q2NL67 630 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 MYLK3Q32MK0 819 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 ZNF589Q86UQ0 364 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-205ENST00000493587 CROCCP3Q8IVE0 287 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 NKX2-3Q8TAU0 364 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 PIP4K2CQ8TBX8 421 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 CENPTQ96BT3 561 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 ERP44Q9BS26 406 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 STMN4Q9H169 189 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-205ENST00000493587 EHD1Q9H4M9 534 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 NHEJ1Q9H9Q4 299 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-205ENST00000493587 PARVGQ9HBI0 331 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 VTA1Q9NP79 307 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 FKBP14Q9NWM8 211 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 QPCTLQ9NXS2 382 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 MAGEC2Q9UBF1 373 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-205ENST00000493587 CLEC11AQ9Y240 323 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 LOC285556D6RIA3 1793 aa7.3□□□□□ -1.24
VPS13B-205ENST00000493587 O00370 1275 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 ADAM23O75077 832 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 TAF5LO75529 589 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 CBX6O95503 412 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 CYP1A2P05177 515 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 FYNP06241 537 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 POLR2EP19388 210 aaKnown RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 PTK2Q05397 1052 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 ITGA9Q13797 1035 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 SUZ12Q15022 739 aaKnown RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 PTPROQ16827 1216 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 TNNI3KQ59H18 835 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 SHC4Q6S5L8 630 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 OSTM1Q86WC4 334 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 DNAJC10Q8IXB1 793 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 ENDOVQ8N8Q3 282 aaKnown RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 RNF169Q8NCN4 708 aa7.29□□□□□ -1.24
VPS13B-205ENST00000493587 RPGRQ92834 1020 aaKnown RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 UTP4Q969X6 686 aaKnown RBP7.29□□□□□ -1.24
VPS13B-205ENST00000493587 GRIP2Q9C0E4 1043 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms