RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 GIT1Q9Y2X7 761 aa19.7■□□□□ 0.74
NUP50-218ENST00000493456 SNX14Q9Y5W7 946 aa19.7■□□□□ 0.74
NUP50-218ENST00000493456 NUMBLQ9Y6R0 609 aa19.7■□□□□ 0.74
NUP50-218ENST00000493456 ZMYM2Q9UBW7 1377 aa19.7■□□□□ 0.74
NUP50-218ENST00000493456 FANCMQ8IYD8 2048 aa19.69■□□□□ 0.74
NUP50-218ENST00000493456 TSPAN1O60635 241 aa19.69■□□□□ 0.74
NUP50-218ENST00000493456 SPATA31D3P0C874 917 aa19.69■□□□□ 0.74
NUP50-218ENST00000493456 YWHABP31946 246 aaKnown RBP19.69■□□□□ 0.74
NUP50-218ENST00000493456 HSPA4P34932 840 aa19.69■□□□□ 0.74
NUP50-218ENST00000493456 STARD6P59095 220 aa19.69■□□□□ 0.74
NUP50-218ENST00000493456 CCT2P78371 535 aaKnown RBP19.69■□□□□ 0.74
NUP50-218ENST00000493456 SSRP1Q08945 709 aaKnown RBP19.69■□□□□ 0.74
NUP50-218ENST00000493456 MXD4Q14582 209 aaPredicted RBP19.69■□□□□ 0.74
NUP50-218ENST00000493456 FUT10Q6P4F1 479 aa19.69■□□□□ 0.74
NUP50-218ENST00000493456 SPATA31D4Q6ZUB0 917 aa19.69■□□□□ 0.74
NUP50-218ENST00000493456 ZFP42Q96MM3 310 aa19.69■□□□□ 0.74
NUP50-218ENST00000493456 LXNQ9BS40 222 aa19.69■□□□□ 0.74
NUP50-218ENST00000493456 TRIM6Q9C030 488 aaPredicted RBP19.69■□□□□ 0.74
NUP50-218ENST00000493456 CSRNP2Q9H175 543 aa19.69■□□□□ 0.74
NUP50-218ENST00000493456 RNF39Q9H2S5 420 aa19.69■□□□□ 0.74
NUP50-218ENST00000493456 KCNMB3Q9NPA1 279 aa19.69■□□□□ 0.74
NUP50-218ENST00000493456 WRAP73Q9P2S5 460 aaPredicted RBP19.69■□□□□ 0.74
NUP50-218ENST00000493456 MTCL1Q9Y4B5 1905 aaKnown RBP19.68■□□□□ 0.74
NUP50-218ENST00000493456 F8W810 466 aa19.68■□□□□ 0.74
NUP50-218ENST00000493456 GCFC2P16383 781 aaKnown RBP19.68■□□□□ 0.74
NUP50-218ENST00000493456 PSMA5P28066 241 aa19.68■□□□□ 0.74
NUP50-218ENST00000493456 PTENP60484 403 aa19.68■□□□□ 0.74
NUP50-218ENST00000493456 NPY5RQ15761 445 aa19.68■□□□□ 0.74
NUP50-218ENST00000493456 INF2Q27J81 1249 aa19.68■□□□□ 0.74
NUP50-218ENST00000493456 LILRA6Q6PI73 481 aa19.68■□□□□ 0.74
NUP50-218ENST00000493456 MTRQ99707 1265 aa19.68■□□□□ 0.74
NUP50-218ENST00000493456 GPR62Q9BZJ7 368 aa19.68■□□□□ 0.74
NUP50-218ENST00000493456 BMP2KQ9NSY1 1161 aaPredicted RBP19.68■□□□□ 0.74
NUP50-218ENST00000493456 DLL3Q9NYJ7 618 aa19.68■□□□□ 0.74
NUP50-218ENST00000493456 ADAM28Q9UKQ2 775 aa19.68■□□□□ 0.74
NUP50-218ENST00000493456 HES2Q9Y543 173 aa19.68■□□□□ 0.74
NUP50-218ENST00000493456 TDRD15B5MCY1 1934 aaKnown RBP19.68■□□□□ 0.74
NUP50-218ENST00000493456 KINO60870 393 aaKnown RBP19.67■□□□□ 0.74
NUP50-218ENST00000493456 ZMYND10O75800 440 aa19.67■□□□□ 0.74
NUP50-218ENST00000493456 FSHRP23945 695 aa19.67■□□□□ 0.74
NUP50-218ENST00000493456 POU5F1BQ06416 359 aa19.67■□□□□ 0.74
NUP50-218ENST00000493456 TFDP1Q14186 410 aa19.67■□□□□ 0.74
NUP50-218ENST00000493456 EPHA7Q15375 998 aa19.67■□□□□ 0.74
NUP50-218ENST00000493456 PPP4R3AQ6IN85 833 aa19.67■□□□□ 0.74
NUP50-218ENST00000493456 IFNLR1Q8IU57 520 aaPredicted RBP19.67■□□□□ 0.74
NUP50-218ENST00000493456 FOXQ1Q9C009 403 aa19.67■□□□□ 0.74
NUP50-218ENST00000493456 MIOSQ9NXC5 875 aa19.67■□□□□ 0.74
NUP50-218ENST00000493456 CEP250Q9BV73 2442 aa19.67■□□□□ 0.74
NUP50-218ENST00000493456 NCOR2Q9Y618 2525 aa19.67■□□□□ 0.74
NUP50-218ENST00000493456 INO80B-WBP1J3KQ70 363 aa19.66■□□□□ 0.74
NUP50-218ENST00000493456 CPLX1O14810 134 aa19.66■□□□□ 0.74
NUP50-218ENST00000493456 TBX3O15119 743 aa19.66■□□□□ 0.74
NUP50-218ENST00000493456 GLULP15104 373 aa19.66■□□□□ 0.74
NUP50-218ENST00000493456 GRIK3Q13003 919 aa19.66■□□□□ 0.74
NUP50-218ENST00000493456 ZNF528Q3MIS6 628 aa19.66■□□□□ 0.74
NUP50-218ENST00000493456 XKR9Q5GH70 373 aa19.66■□□□□ 0.74
NUP50-218ENST00000493456 MTSS1LQ765P7 747 aa19.66■□□□□ 0.74
NUP50-218ENST00000493456 GLYCTKQ8IVS8 523 aa19.66■□□□□ 0.74
NUP50-218ENST00000493456 CPB2Q96IY4 423 aa19.66■□□□□ 0.74
NUP50-218ENST00000493456 B3GALT6Q96L58 329 aa19.66■□□□□ 0.74
NUP50-218ENST00000493456 APOL6Q9BWW8 343 aa19.66■□□□□ 0.74
NUP50-218ENST00000493456 NXF3Q9H4D5 531 aaKnown RBP19.66■□□□□ 0.74
NUP50-218ENST00000493456 ZSWIM4Q9H7M6 989 aa19.66■□□□□ 0.74
NUP50-218ENST00000493456 ARID2Q68CP9 1835 aa19.66■□□□□ 0.74
NUP50-218ENST00000493456 SF3B1O75533 1304 aaKnown RBP eCLIP19.66■□□□□ 0.742e-7■■■■■ 41.4
NUP50-218ENST00000493456 SPTLC1O15269 473 aa19.65■□□□□ 0.74
NUP50-218ENST00000493456 HNRNPA1P09651 372 aaKnown RBP eCLIP19.65■□□□□ 0.74
NUP50-218ENST00000493456 PRKCQQ04759 706 aa19.65■□□□□ 0.74
NUP50-218ENST00000493456 LIN9Q5TKA1 542 aa19.65■□□□□ 0.74
NUP50-218ENST00000493456 POTEGQ6S5H5 508 aa19.65■□□□□ 0.74
NUP50-218ENST00000493456 NEK8Q86SG6 692 aa19.65■□□□□ 0.74
NUP50-218ENST00000493456 SUMF1Q8NBK3 374 aa19.65■□□□□ 0.74
NUP50-218ENST00000493456 GSTCDQ8NEC7 633 aa19.65■□□□□ 0.74
NUP50-218ENST00000493456 FGF14Q92915 247 aa19.65■□□□□ 0.74
NUP50-218ENST00000493456 NAP1L4Q99733 375 aaKnown RBP19.65■□□□□ 0.74
NUP50-218ENST00000493456 NFKBIZQ9BYH8 718 aa19.65■□□□□ 0.74
NUP50-218ENST00000493456 BCO2Q9BYV7 579 aa19.65■□□□□ 0.74
NUP50-218ENST00000493456 FBXW11Q9UKB1 542 aa19.65■□□□□ 0.74
NUP50-218ENST00000493456 FBXO4Q9UKT5 387 aa19.65■□□□□ 0.74
NUP50-218ENST00000493456 CDH7Q9ULB5 785 aa19.65■□□□□ 0.74
NUP50-218ENST00000493456 CCDC194A0A1B0GVG4 234 aa19.64■□□□□ 0.73
NUP50-218ENST00000493456 KANSL1LA0AUZ9 987 aa19.64■□□□□ 0.73
NUP50-218ENST00000493456 POTEMA6NI47 508 aa19.64■□□□□ 0.73
NUP50-218ENST00000493456 ARF4P18085 180 aaPredicted RBP19.64■□□□□ 0.73
NUP50-218ENST00000493456 HOXA9P31269 272 aa19.64■□□□□ 0.73
NUP50-218ENST00000493456 MAGEA9P43362 315 aa19.64■□□□□ 0.73
NUP50-218ENST00000493456 GPC5P78333 572 aa19.64■□□□□ 0.73
NUP50-218ENST00000493456 MBTD1Q05BQ5 628 aa19.64■□□□□ 0.73
NUP50-218ENST00000493456 AMHR2Q16671 573 aa19.64■□□□□ 0.73
NUP50-218ENST00000493456 SLC27A1Q6PCB7 646 aa19.64■□□□□ 0.73
NUP50-218ENST00000493456 CPLX2Q6PUV4 134 aaKnown RBP19.64■□□□□ 0.73
NUP50-218ENST00000493456 MAML2Q8IZL2 1156 aaPredicted RBP19.64■□□□□ 0.73
NUP50-218ENST00000493456 DDX23Q9BUQ8 820 aaKnown RBP19.64■□□□□ 0.73
NUP50-218ENST00000493456 OSBPL6Q9BZF3 934 aa19.64■□□□□ 0.73
NUP50-218ENST00000493456 XPNPEP1Q9NQW7 623 aa19.64■□□□□ 0.73
NUP50-218ENST00000493456 MIA3Q5JRA6 1907 aa19.63■□□□□ 0.73
NUP50-218ENST00000493456 LAMTOR5O43504 91 aa19.63■□□□□ 0.73
NUP50-218ENST00000493456 MARCH6O60337 910 aa19.63■□□□□ 0.73
NUP50-218ENST00000493456 TADA2AO75478 443 aa19.63■□□□□ 0.73
NUP50-218ENST00000493456 RPL17P18621 184 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms