RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 ENPP3O14638 875 aa17.21■□□□□ 0.35
HPS4-216ENST00000493455 PPP1R2P41236 205 aa17.21■□□□□ 0.35
HPS4-216ENST00000493455 PMS1P54277 932 aaKnown RBP17.21■□□□□ 0.35
HPS4-216ENST00000493455 DCAF4L1Q3SXM0 396 aa17.21■□□□□ 0.35
HPS4-216ENST00000493455 ANO6Q4KMQ2 910 aa17.21■□□□□ 0.35
HPS4-216ENST00000493455 TMEM240Q5SV17 173 aa17.21■□□□□ 0.35
HPS4-216ENST00000493455 SLFN12LQ6IEE8 588 aa17.21■□□□□ 0.35
HPS4-216ENST00000493455 TMCO2Q7Z6W1 182 aaPredicted RBP17.21■□□□□ 0.35
HPS4-216ENST00000493455 ZSWIM2Q8NEG5 633 aa17.21■□□□□ 0.35
HPS4-216ENST00000493455 CCDC51Q96ER9 411 aa17.21■□□□□ 0.35
HPS4-216ENST00000493455 DHTKD1Q96HY7 919 aaPredicted RBP17.21■□□□□ 0.35
HPS4-216ENST00000493455 TSPYL2Q9H2G4 693 aaPredicted RBP17.21■□□□□ 0.35
HPS4-216ENST00000493455 NXF3Q9H4D5 531 aaKnown RBP17.21■□□□□ 0.35
HPS4-216ENST00000493455 PARP2Q9UGN5 583 aa17.21■□□□□ 0.35
HPS4-216ENST00000493455 AGO2Q9UKV8 859 aaKnown RBP17.21■□□□□ 0.35
HPS4-216ENST00000493455 IPPQ9Y573 584 aa17.21■□□□□ 0.35
HPS4-216ENST00000493455 PCDHB2Q9Y5E7 798 aa17.21■□□□□ 0.35
HPS4-216ENST00000493455 CITO14578 2027 aa17.21■□□□□ 0.35
HPS4-216ENST00000493455 PTPRSQ13332 1948 aa17.21■□□□□ 0.35
HPS4-216ENST00000493455 TRIP11Q15643 1979 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 ABHD14A-ACY1A0A1B0GW23 586 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.2■□□□□ 0.34
HPS4-216ENST00000493455 PDXKO00764 312 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 AMHP03971 560 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 NR3C1P04150 777 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 MCF2P10911 925 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 PROZP22891 400 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 AKAP5P24588 427 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 CCNE1P24864 410 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 ADSSP30520 456 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 WDR5P61964 334 aaKnown RBP17.2■□□□□ 0.34
HPS4-216ENST00000493455 DEFB103AP81534 67 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 TPD52L1Q16890 204 aaPredicted RBP17.2■□□□□ 0.34
HPS4-216ENST00000493455 COBLL1Q53SF7 1204 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 ZBTB41Q5SVQ8 909 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 ANKRD40Q6AI12 368 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 SLC24A5Q71RS6 500 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 RDH13Q8NBN7 331 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 KCNN1Q92952 543 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 FAM212AQ96EL1 285 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 EEF2KMTQ96G04 330 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 FAM213AQ9BRX8 229 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 PTPRHQ9HD43 1115 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 C1orf112Q9NSG2 853 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 SNTG2Q9NY99 539 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 HSPBP1Q9NZL4 362 aa17.2■□□□□ 0.34
HPS4-216ENST00000493455 BICDL2A1A5D9 508 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 C9IYK1 514 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 ABLIM1O14639 778 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 EXOC3O60645 756 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 ITGA4P13612 1032 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 NR2F2P24468 414 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 TNFSF9P41273 254 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 ACOT2P49753 483 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 RAB27AP51159 221 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 MCL1Q07820 350 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 C9orf50Q5SZB4 431 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 CEP135Q66GS9 1140 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 ECHDC2Q86YB7 292 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 TMEM192Q8IY95 271 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 SMG8Q8ND04 991 aaKnown RBP17.19■□□□□ 0.34
HPS4-216ENST00000493455 GOLGA5Q8TBA6 731 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 CCDC94Q9BW85 323 aaPredicted RBP17.19■□□□□ 0.34
HPS4-216ENST00000493455 KLK14Q9P0G3 267 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 CXXC1Q9P0U4 656 aaPredicted RBP17.19■□□□□ 0.34
HPS4-216ENST00000493455 PCDHB7Q9Y5E2 793 aa17.19■□□□□ 0.34
HPS4-216ENST00000493455 A0A0B4J269 797 aa17.18■□□□□ 0.34
HPS4-216ENST00000493455 MEIS3P2A8K0S8 358 aa17.18■□□□□ 0.34
HPS4-216ENST00000493455 OGTO15294 1046 aa17.18■□□□□ 0.34
HPS4-216ENST00000493455 BAIAP3O94812 1187 aa17.18■□□□□ 0.34
HPS4-216ENST00000493455 STAG3L1P0CL83 205 aa17.18■□□□□ 0.34
HPS4-216ENST00000493455 GARTP22102 1010 aa17.18■□□□□ 0.34
HPS4-216ENST00000493455 CENPPQ6IPU0 288 aa17.18■□□□□ 0.34
HPS4-216ENST00000493455 CREBRFQ8IUR6 639 aa17.18■□□□□ 0.34
HPS4-216ENST00000493455 HACE1Q8IYU2 909 aa17.18■□□□□ 0.34
HPS4-216ENST00000493455 GPD1LQ8N335 351 aa17.18■□□□□ 0.34
HPS4-216ENST00000493455 RNPC3Q96LT9 517 aaKnown RBP17.18■□□□□ 0.34
HPS4-216ENST00000493455 MTIF3Q9H2K0 278 aaKnown RBP17.18■□□□□ 0.34
HPS4-216ENST00000493455 RNF39Q9H2S5 420 aa17.18■□□□□ 0.34
HPS4-216ENST00000493455 RNF19AQ9NV58 838 aa17.18■□□□□ 0.34
HPS4-216ENST00000493455 INPP5FQ9Y2H2 1132 aa17.18■□□□□ 0.34
HPS4-216ENST00000493455 TTC3P53804 2025 aa17.18■□□□□ 0.34
HPS4-216ENST00000493455 A0A0U1RQF3 1178 aa17.17■□□□□ 0.34
HPS4-216ENST00000493455 CEP290O15078 2479 aa17.17■□□□□ 0.34
HPS4-216ENST00000493455 EFCAB14O75071 495 aa17.17■□□□□ 0.34
HPS4-216ENST00000493455 CXCL8P10145 99 aa17.17■□□□□ 0.34
HPS4-216ENST00000493455 FGFR1P11362 822 aa17.17■□□□□ 0.34
HPS4-216ENST00000493455 SKIP12755 728 aa17.17■□□□□ 0.34
HPS4-216ENST00000493455 ANK1P16157 1881 aa17.17■□□□□ 0.34
HPS4-216ENST00000493455 YARSP54577 528 aaKnown RBP17.17■□□□□ 0.34
HPS4-216ENST00000493455 ADAM9Q13443 819 aa17.17■□□□□ 0.34
HPS4-216ENST00000493455 SHHQ15465 462 aa17.17■□□□□ 0.34
HPS4-216ENST00000493455 PDE4DIPQ5VU43 2346 aa17.17■□□□□ 0.34
HPS4-216ENST00000493455 XXYLT1Q8NBI6 393 aa17.17■□□□□ 0.34
HPS4-216ENST00000493455 PGBD4Q96DM1 585 aa17.17■□□□□ 0.34
HPS4-216ENST00000493455 CGNQ9P2M7 1197 aaKnown RBP17.17■□□□□ 0.34
HPS4-216ENST00000493455 RWDD2AQ9UIY3 292 aa17.17■□□□□ 0.34
HPS4-216ENST00000493455 TRAF3IP3Q9Y228 551 aa17.17■□□□□ 0.34
HPS4-216ENST00000493455 STYXL1Q9Y6J8 313 aa17.17■□□□□ 0.34
HPS4-216ENST00000493455 SLC4A7Q9Y6M7 1214 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms