RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 RMND1Q9NWS8 449 aa8.91□□□□□ -0.98
TM4SF1-204ENST00000493348 MTUS1Q9ULD2 1270 aa8.91□□□□□ -0.98
TM4SF1-204ENST00000493348 TBX20Q9UMR3 447 aa8.91□□□□□ -0.98
TM4SF1-204ENST00000493348 HPSEQ9Y251 543 aa8.91□□□□□ -0.98
TM4SF1-204ENST00000493348 TNFSF13BQ9Y275 285 aa8.91□□□□□ -0.98
TM4SF1-204ENST00000493348 IPPQ9Y573 584 aa8.91□□□□□ -0.98
TM4SF1-204ENST00000493348 LAMA2P24043 3122 aaKnown RBP8.91□□□□□ -0.98
TM4SF1-204ENST00000493348 TRIP11Q15643 1979 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 FAM237AA0A1B0GTK4 181 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 LINC01553A4QN01 128 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 SOX1O00570 391 aaPredicted RBP8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 ACTN4O43707 911 aaKnown RBP8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 LPXNO60711 386 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 PRPF40AO75400 957 aaKnown RBP8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 TOM1L1O75674 476 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 MCF2P10911 925 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 FGFR1P11362 822 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 LAG3P18627 525 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 HOXA11P31270 313 aaPredicted RBP8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 ALDH7A1P49419 539 aaKnown RBP8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 FXR1P51114 621 aaKnown RBP eCLIP8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 GTF2BQ00403 316 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 PSMD2Q13200 908 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 CUL4BQ13620 913 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 AMHR2Q16671 573 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 NOMO2Q5JPE7 1267 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 ZNF720Q7Z2F6 126 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 THNSL1Q8IYQ7 743 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 GRAMD1CQ8IYS0 662 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 FBXO22Q8NEZ5 403 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 LRRC15Q8TF66 581 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 POMGNT1Q8WZA1 660 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 LPPQ93052 612 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 DNAJC19Q96DA6 116 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 ACAP3Q96P50 834 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 C11orf84Q9BUA3 381 aaPredicted RBP8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 MSTO1Q9BUK6 570 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 EIF2AQ9BY44 585 aaKnown RBP8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 GTPBP4Q9BZE4 634 aaKnown RBP8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 GBP3Q9H0R5 595 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 ST6GALNAC4Q9H4F1 302 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 CERS4Q9HA82 394 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 GDAQ9Y2T3 454 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 YBX2Q9Y2T7 364 aaKnown RBP8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 GIT1Q9Y2X7 761 aa8.9□□□□□ -0.98
TM4SF1-204ENST00000493348 UBE4BO95155 1302 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 EIF3DO15371 548 aaKnown RBP eCLIP8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 ZC3H11AO75152 810 aaKnown RBP eCLIP8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 LDHAP00338 332 aaKnown RBP8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 RPN1P04843 607 aaKnown RBP8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 RB1P06400 928 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 IGFBP4P22692 258 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 AKAP5P24588 427 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 CA8P35219 290 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 PPM1AP35813 382 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 OSTNP61366 133 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 TAP1Q03518 808 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 KRT17Q04695 432 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 STIM1Q13586 685 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 PTPROQ16827 1216 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 ZC2HC1CQ53FD0 456 aaPredicted RBP8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 NT5DC1Q5TFE4 455 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 HS2ST1Q7LGA3 356 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 MRPL10Q7Z7H8 261 aaKnown RBP8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 ZNF598Q86UK7 904 aaKnown RBP8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 MAP4K3Q8IVH8 894 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 TMEM192Q8IY95 271 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 TMEM87AQ8NBN3 555 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 SMARCE1Q969G3 411 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 ZNF689Q96CS4 500 aaPredicted RBP8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 TIGD1Q96MW7 591 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 ZNF558Q96NG5 402 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 PLVAPQ9BX97 442 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 SEMA6BQ9H3T3 888 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 GOLPH3LQ9H4A5 285 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 NXF3Q9H4D5 531 aaKnown RBP8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 SLC39A2Q9NP94 309 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 SNTG2Q9NY99 539 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 PUF60Q9UHX1 559 aaKnown RBP8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 R3HCC1Q9Y3T6 440 aaKnown RBP8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 KIAA1671Q9BY89 1806 aa8.89□□□□□ -0.99
TM4SF1-204ENST00000493348 ZMYM2Q9UBW7 1377 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 FRMD3A2A2Y4 597 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 LCHNA4D1U4 455 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 ARL5CA6NH57 179 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 XPOTO43592 962 aaKnown RBP8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 GALR2O43603 387 aaPredicted RBP8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 PRPF6O94906 941 aaKnown RBP8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 POMCP01189 267 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 THP07101 528 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 MYBP10242 640 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 CASP1P29466 404 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 BMPR1AP36894 532 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 MLH1P40692 756 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 OR1G1P47890 313 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 GATMP50440 423 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 ERVK-21P61565 698 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 PPP2R3AQ06190 1150 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 GRIK3Q13003 919 aa8.88□□□□□ -0.99
TM4SF1-204ENST00000493348 GPM6BQ13491 265 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms