RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 RNF168Q8IYW5 571 aaPredicted RBP24.53■■□□□ 1.52
LYSMD4-208ENST00000493256 C4orf32Q8N8J7 132 aa24.53■■□□□ 1.52
LYSMD4-208ENST00000493256 GSTCDQ8NEC7 633 aa24.53■■□□□ 1.52
LYSMD4-208ENST00000493256 PRMT7Q9NVM4 692 aaPredicted RBP24.53■■□□□ 1.52
LYSMD4-208ENST00000493256 MYO10Q9HD67 2058 aa24.53■■□□□ 1.52
LYSMD4-208ENST00000493256 CYP11B2P19099 503 aa24.52■■□□□ 1.52
LYSMD4-208ENST00000493256 TRAPPC10P48553 1259 aa24.52■■□□□ 1.52
LYSMD4-208ENST00000493256 ECM1Q16610 540 aa24.52■■□□□ 1.52
LYSMD4-208ENST00000493256 ATAT1Q5SQI0 421 aa24.52■■□□□ 1.52
LYSMD4-208ENST00000493256 ZBTB33Q86T24 672 aa24.52■■□□□ 1.52
LYSMD4-208ENST00000493256 ZBTB8OSQ8IWT0 167 aa24.52■■□□□ 1.52
LYSMD4-208ENST00000493256 ASIC4Q96FT7 647 aa24.52■■□□□ 1.52
LYSMD4-208ENST00000493256 PRIMPOLQ96LW4 560 aa24.52■■□□□ 1.52
LYSMD4-208ENST00000493256 RPS6KC1Q96S38 1066 aa24.52■■□□□ 1.52
LYSMD4-208ENST00000493256 FZD8Q9H461 694 aa24.52■■□□□ 1.52
LYSMD4-208ENST00000493256 SFXN1Q9H9B4 322 aa24.52■■□□□ 1.52
LYSMD4-208ENST00000493256 KLK14Q9P0G3 267 aa24.52■■□□□ 1.52
LYSMD4-208ENST00000493256 TTLL13PA6NNM8 815 aa24.51■■□□□ 1.51
LYSMD4-208ENST00000493256 FXR2P51116 673 aaKnown RBP eCLIP24.51■■□□□ 1.51
LYSMD4-208ENST00000493256 FAM187BQ17R55 369 aa24.51■■□□□ 1.51
LYSMD4-208ENST00000493256 HAUS3Q68CZ6 603 aa24.51■■□□□ 1.51
LYSMD4-208ENST00000493256 PARP2Q9UGN5 583 aa24.51■■□□□ 1.51
LYSMD4-208ENST00000493256 NOL7Q9UMY1 257 aaKnown RBP24.51■■□□□ 1.51
LYSMD4-208ENST00000493256 ZMYM2Q9UBW7 1377 aa24.51■■□□□ 1.51
LYSMD4-208ENST00000493256 DENND4AQ7Z401 1863 aa24.51■■□□□ 1.51
LYSMD4-208ENST00000493256 NR1I2O75469 434 aa24.5■■□□□ 1.51
LYSMD4-208ENST00000493256 CENPBP07199 599 aaPredicted RBP24.5■■□□□ 1.51
LYSMD4-208ENST00000493256 MUTP22033 750 aa24.5■■□□□ 1.51
LYSMD4-208ENST00000493256 U2AF2P26368 475 aaKnown RBP eCLIP24.5■■□□□ 1.51
LYSMD4-208ENST00000493256 GLUD2P49448 558 aa24.5■■□□□ 1.51
LYSMD4-208ENST00000493256 TDRD5Q8NAT2 981 aaKnown RBP24.5■■□□□ 1.51
LYSMD4-208ENST00000493256 KREMEN2Q8NCW0 462 aa24.5■■□□□ 1.51
LYSMD4-208ENST00000493256 COLEC11Q9BWP8 271 aa24.5■■□□□ 1.51
LYSMD4-208ENST00000493256 C2orf40Q9H1Z8 148 aa24.5■■□□□ 1.51
LYSMD4-208ENST00000493256 PDZD7Q9H5P4 517 aa24.5■■□□□ 1.51
LYSMD4-208ENST00000493256 SPDYE4A6NLX3 237 aa24.49■■□□□ 1.51
LYSMD4-208ENST00000493256 TEX28O15482 410 aa24.49■■□□□ 1.51
LYSMD4-208ENST00000493256 CCT6AP40227 531 aaKnown RBP24.49■■□□□ 1.51
LYSMD4-208ENST00000493256 NAMPTP43490 491 aa24.49■■□□□ 1.51
LYSMD4-208ENST00000493256 TOB1P50616 345 aaPredicted RBP24.49■■□□□ 1.51
LYSMD4-208ENST00000493256 NHLH1Q02575 133 aa24.49■■□□□ 1.51
LYSMD4-208ENST00000493256 GRIK3Q13003 919 aa24.49■■□□□ 1.51
LYSMD4-208ENST00000493256 KIAA0319Q5VV43 1072 aa24.49■■□□□ 1.51
LYSMD4-208ENST00000493256 GPR149Q86SP6 731 aa24.49■■□□□ 1.51
LYSMD4-208ENST00000493256 SUGP1Q8IWZ8 645 aaKnown RBP24.49■■□□□ 1.51
LYSMD4-208ENST00000493256 FBXL6Q8N531 539 aa24.49■■□□□ 1.51
LYSMD4-208ENST00000493256 CCDC113Q9H0I3 377 aa24.49■■□□□ 1.51
LYSMD4-208ENST00000493256 SSX2IPQ9Y2D8 614 aa24.49■■□□□ 1.51
LYSMD4-208ENST00000493256 USP20Q9Y2K6 914 aa24.49■■□□□ 1.51
LYSMD4-208ENST00000493256 PLXNA3P51805 1871 aa24.49■■□□□ 1.51
LYSMD4-208ENST00000493256 C2orf16Q68DN1 1984 aa24.49■■□□□ 1.51
LYSMD4-208ENST00000493256 N4BP3O15049 544 aa24.48■■□□□ 1.51
LYSMD4-208ENST00000493256 PRKCBP05771 671 aa24.48■■□□□ 1.51
LYSMD4-208ENST00000493256 ADH1AP07327 375 aa24.48■■□□□ 1.51
LYSMD4-208ENST00000493256 DSG1Q02413 1049 aa24.48■■□□□ 1.51
LYSMD4-208ENST00000493256 PRPF4BQ13523 1007 aaKnown RBP24.48■■□□□ 1.51
LYSMD4-208ENST00000493256 MAPK6Q16659 721 aa24.48■■□□□ 1.51
LYSMD4-208ENST00000493256 DEPTORQ8TB45 409 aa24.48■■□□□ 1.51
LYSMD4-208ENST00000493256 RABGGTAQ92696 567 aa24.48■■□□□ 1.51
LYSMD4-208ENST00000493256 RXFP1Q9HBX9 757 aa24.48■■□□□ 1.51
LYSMD4-208ENST00000493256 POLD4Q9HCU8 107 aa24.48■■□□□ 1.51
LYSMD4-208ENST00000493256 MAN1C1Q9NR34 630 aa24.48■■□□□ 1.51
LYSMD4-208ENST00000493256 LRWD1Q9UFC0 647 aa24.48■■□□□ 1.51
LYSMD4-208ENST00000493256 SORCS3Q9UPU3 1222 aa24.48■■□□□ 1.51
LYSMD4-208ENST00000493256 USTQ9Y2C2 406 aa24.48■■□□□ 1.51
LYSMD4-208ENST00000493256 PCDHB6Q9Y5E3 794 aa24.48■■□□□ 1.51
LYSMD4-208ENST00000493256 EDN1P05305 212 aa24.47■■□□□ 1.51
LYSMD4-208ENST00000493256 PTGDRQ13258 359 aa24.47■■□□□ 1.51
LYSMD4-208ENST00000493256 IER5LQ5T953 404 aa24.47■■□□□ 1.51
LYSMD4-208ENST00000493256 FUT10Q6P4F1 479 aa24.47■■□□□ 1.51
LYSMD4-208ENST00000493256 ZDHHC14Q8IZN3 488 aa24.47■■□□□ 1.51
LYSMD4-208ENST00000493256 B3GALT6Q96L58 329 aa24.47■■□□□ 1.51
LYSMD4-208ENST00000493256 KIFC3Q9BVG8 833 aa24.47■■□□□ 1.51
LYSMD4-208ENST00000493256 GPR62Q9BZJ7 368 aa24.47■■□□□ 1.51
LYSMD4-208ENST00000493256 BHMT2Q9H2M3 363 aa24.47■■□□□ 1.51
LYSMD4-208ENST00000493256 CHST7Q9NS84 486 aa24.47■■□□□ 1.51
LYSMD4-208ENST00000493256 CACNG4Q9UBN1 327 aa24.47■■□□□ 1.51
LYSMD4-208ENST00000493256 ADAM28Q9UKQ2 775 aa24.47■■□□□ 1.51
LYSMD4-208ENST00000493256 KIAA1024Q9UPX6 916 aa24.47■■□□□ 1.51
LYSMD4-208ENST00000493256 KMT2EQ8IZD2 1858 aa24.47■■□□□ 1.51
LYSMD4-208ENST00000493256 ACKR2O00590 384 aa24.46■■□□□ 1.51
LYSMD4-208ENST00000493256 BRD1O95696 1058 aa24.46■■□□□ 1.51
LYSMD4-208ENST00000493256 ASGR2P07307 311 aa24.46■■□□□ 1.51
LYSMD4-208ENST00000493256 LIG1P18858 919 aa24.46■■□□□ 1.51
LYSMD4-208ENST00000493256 MTMR3Q13615 1198 aa24.46■■□□□ 1.51
LYSMD4-208ENST00000493256 PDIA5Q14554 519 aa24.46■■□□□ 1.51
LYSMD4-208ENST00000493256 PPP2R5AQ15172 486 aa24.46■■□□□ 1.51
LYSMD4-208ENST00000493256 TMEM132AQ24JP5 1023 aa24.46■■□□□ 1.51
LYSMD4-208ENST00000493256 IGSF22Q8N9C0 903 aa24.46■■□□□ 1.51
LYSMD4-208ENST00000493256 SMOC2Q9H3U7 446 aa24.46■■□□□ 1.51
LYSMD4-208ENST00000493256 DDX19AQ9NUU7 478 aaKnown RBP24.46■■□□□ 1.51
LYSMD4-208ENST00000493256 LIMD1Q9UGP4 676 aa24.46■■□□□ 1.51
LYSMD4-208ENST00000493256 GLUD1P00367 558 aa24.45■■□□□ 1.5
LYSMD4-208ENST00000493256 EEF1DP3Q658K8 133 aa24.45■■□□□ 1.5
LYSMD4-208ENST00000493256 C15orf39Q6ZRI6 1047 aa24.45■■□□□ 1.5
LYSMD4-208ENST00000493256 UBALD2Q8IYN6 164 aa24.45■■□□□ 1.5
LYSMD4-208ENST00000493256 PLCD3Q8N3E9 789 aa24.45■■□□□ 1.5
LYSMD4-208ENST00000493256 PRSS33Q8NF86 280 aa24.45■■□□□ 1.5
LYSMD4-208ENST00000493256 SNX29Q8TEQ0 813 aa24.45■■□□□ 1.5
LYSMD4-208ENST00000493256 PAAF1Q9BRP4 392 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms