RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 GAD1Q99259 594 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 EIF2AQ9BY44 585 aaKnown RBP12.27□□□□□ -0.45
SND1-215ENST00000492772 PRKD2Q9BZL6 878 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 NT5C3AQ9H0P0 336 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 CSRNP2Q9H175 543 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 KCNMB3Q9NPA1 279 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 CHST7Q9NS84 486 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 DLGAP2Q9P1A6 1054 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 FNIP2Q9P278 1114 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 GIT1Q9Y2X7 761 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 PATJQ8NI35 1801 aa12.27□□□□□ -0.45
SND1-215ENST00000492772 CPLX1O14810 134 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 TBX3O15119 743 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 DCNP07585 359 aaKnown RBP12.26□□□□□ -0.45
SND1-215ENST00000492772 SPATA31D3P0C874 917 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 SP9P0CG40 484 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 PTENP60484 403 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 TFDP1Q14186 410 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 MXD4Q14582 209 aaPredicted RBP12.26□□□□□ -0.45
SND1-215ENST00000492772 PUM1Q14671 1186 aaKnown RBP eCLIP12.26□□□□□ -0.45
SND1-215ENST00000492772 NPY5RQ15761 445 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 PPP4R3AQ6IN85 833 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 SPATA31D4Q6ZUB0 917 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 PALB2Q86YC2 1186 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 PJA1Q8NG27 643 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 BORCS6Q96GS4 357 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 SHDQ96IW2 340 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 ZFP42Q96MM3 310 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 MTRQ99707 1265 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 NAP1L4Q99733 375 aaKnown RBP12.26□□□□□ -0.45
SND1-215ENST00000492772 TRIM6Q9C030 488 aaPredicted RBP12.26□□□□□ -0.45
SND1-215ENST00000492772 BMP2KQ9NSY1 1161 aaPredicted RBP12.26□□□□□ -0.45
SND1-215ENST00000492772 WRAP73Q9P2S5 460 aaPredicted RBP12.26□□□□□ -0.45
SND1-215ENST00000492772 ADAM28Q9UKQ2 775 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 NUMBLQ9Y6R0 609 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 OTOGLQ3ZCN5 2332 aa12.26□□□□□ -0.45
SND1-215ENST00000492772 CCDC194A0A1B0GVG4 234 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 F8W810 466 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 INO80B-WBP1J3KQ70 363 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 ZMYND10O75800 440 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 MYBP10242 640 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 STARD6P59095 220 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 POU5F1BQ06416 359 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 GRIK3Q13003 919 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 EPHA7Q15375 998 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 XKR9Q5GH70 373 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 LILRA6Q6PI73 481 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 CPLX2Q6PUV4 134 aaKnown RBP12.25□□□□□ -0.45
SND1-215ENST00000492772 NEK8Q86SG6 692 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 IFNLR1Q8IU57 520 aaPredicted RBP12.25□□□□□ -0.45
SND1-215ENST00000492772 APOL6Q9BWW8 343 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 RNF39Q9H2S5 420 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 ZSWIM4Q9H7M6 989 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 HES2Q9Y543 173 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 SF3B1O75533 1304 aaKnown RBP eCLIP12.25□□□□□ -0.45
SND1-215ENST00000492772 DNAH14Q0VDD8 3507 aa12.25□□□□□ -0.45
SND1-215ENST00000492772 MED19A0JLT2 244 aaPredicted RBP12.24□□□□□ -0.45
SND1-215ENST00000492772 SPTLC1O15269 473 aa12.24□□□□□ -0.45
SND1-215ENST00000492772 KINO60870 393 aaKnown RBP12.24□□□□□ -0.45
SND1-215ENST00000492772 HNRNPA1P09651 372 aaKnown RBP eCLIP12.24□□□□□ -0.45
SND1-215ENST00000492772 FSHRP23945 695 aa12.24□□□□□ -0.45
SND1-215ENST00000492772 MBTD1Q05BQ5 628 aa12.24□□□□□ -0.45
SND1-215ENST00000492772 ZNF528Q3MIS6 628 aa12.24□□□□□ -0.45
SND1-215ENST00000492772 LIN9Q5TKA1 542 aa12.24□□□□□ -0.45
SND1-215ENST00000492772 NCAPH2Q6IBW4 605 aa12.24□□□□□ -0.45
SND1-215ENST00000492772 SLC27A1Q6PCB7 646 aa12.24□□□□□ -0.45
SND1-215ENST00000492772 MTSS1LQ765P7 747 aa12.24□□□□□ -0.45
SND1-215ENST00000492772 CENPQQ7L2Z9 268 aaPredicted RBP12.24□□□□□ -0.45
SND1-215ENST00000492772 GLYCTKQ8IVS8 523 aa12.24□□□□□ -0.45
SND1-215ENST00000492772 CPB2Q96IY4 423 aa12.24□□□□□ -0.45
SND1-215ENST00000492772 B3GALT6Q96L58 329 aa12.24□□□□□ -0.45
SND1-215ENST00000492772 NFKBIZQ9BYH8 718 aa12.24□□□□□ -0.45
SND1-215ENST00000492772 GPR62Q9BZJ7 368 aa12.24□□□□□ -0.45
SND1-215ENST00000492772 FOXQ1Q9C009 403 aa12.24□□□□□ -0.45
SND1-215ENST00000492772 NXF3Q9H4D5 531 aaKnown RBP12.24□□□□□ -0.45
SND1-215ENST00000492772 FBXW11Q9UKB1 542 aa12.24□□□□□ -0.45
SND1-215ENST00000492772 MARCH6O60337 910 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 CCNT1O60563 726 aaKnown RBP12.23□□□□□ -0.45
SND1-215ENST00000492772 REC8O95072 547 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 ARF4P18085 180 aaPredicted RBP12.23□□□□□ -0.45
SND1-215ENST00000492772 HOXA9P31269 272 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 MAGEA9P43362 315 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 PRKCQQ04759 706 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 TOB2Q14106 344 aaPredicted RBP12.23□□□□□ -0.45
SND1-215ENST00000492772 HSP90AA2PQ14568 343 aaPredicted RBP12.23□□□□□ -0.45
SND1-215ENST00000492772 AMHR2Q16671 573 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 RUFY3Q7L099 469 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 SLFN12Q8IYM2 578 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 ZNF274Q96GC6 653 aaPredicted RBP12.23□□□□□ -0.45
SND1-215ENST00000492772 DYDC2Q96IM9 177 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 CCDC43Q96MW1 224 aaKnown RBP12.23□□□□□ -0.45
SND1-215ENST00000492772 BCO2Q9BYV7 579 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 XPNPEP1Q9NQW7 623 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 MIOSQ9NXC5 875 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 DLL3Q9NYJ7 618 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 RGL1Q9NZL6 768 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 FBXO4Q9UKT5 387 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 CDH7Q9ULB5 785 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 CEP250Q9BV73 2442 aa12.23□□□□□ -0.45
SND1-215ENST00000492772 KANSL1LA0AUZ9 987 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms