RNA–Protein interactions for RNA: ENST00000492672.5

COPS3-210, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 4

Gene COPS3, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-210ENST00000492672 KCNB1Q14721 858 aa17.39■□□□□ 0.37
COPS3-210ENST00000492672 ZNF568Q3ZCX4 644 aa17.39■□□□□ 0.37
COPS3-210ENST00000492672 PAN2Q504Q3 1202 aaKnown RBP17.39■□□□□ 0.37
COPS3-210ENST00000492672 NPAS4Q8IUM7 802 aa17.39■□□□□ 0.37
COPS3-210ENST00000492672 THNSL1Q8IYQ7 743 aa17.39■□□□□ 0.37
COPS3-210ENST00000492672 HELQQ8TDG4 1101 aa17.39■□□□□ 0.37
COPS3-210ENST00000492672 MTIF3Q9H2K0 278 aaKnown RBP17.39■□□□□ 0.37
COPS3-210ENST00000492672 TMEM161AQ9NX61 479 aa17.39■□□□□ 0.37
COPS3-210ENST00000492672 KLK14Q9P0G3 267 aa17.39■□□□□ 0.37
COPS3-210ENST00000492672 LRFN2Q9ULH4 789 aa17.39■□□□□ 0.37
COPS3-210ENST00000492672 MYO9BQ13459 2157 aa17.39■□□□□ 0.37
COPS3-210ENST00000492672 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.38■□□□□ 0.37
COPS3-210ENST00000492672 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.38■□□□□ 0.37
COPS3-210ENST00000492672 CLIC2O15247 247 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 TOM1L1O75674 476 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 DGKIO75912 1065 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 SMC2O95347 1197 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 TNFSF9P41273 254 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 HTRA4P83105 476 aaPredicted RBP17.38■□□□□ 0.37
COPS3-210ENST00000492672 PSMD2Q13200 908 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 MPZL3Q6UWV2 235 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 ZPBP2Q6X784 338 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 SYCP3Q8IZU3 236 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 TMEM130Q8N3G9 435 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 SLC17A8Q8NDX2 589 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 PHOSPHO2Q8TCD6 241 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 HVCN1Q96D96 273 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 CCDC51Q96ER9 411 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 CBWD1Q9BRT8 395 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 ZBED2Q9BTP6 218 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 PBX4Q9BYU1 374 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 NUP62CLQ9H1M0 184 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 PCIF1Q9H4Z3 704 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 RC3H2Q9HBD1 1191 aaKnown RBP17.38■□□□□ 0.37
COPS3-210ENST00000492672 TMEM63CQ9P1W3 806 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 KIAA1468Q9P260 1216 aa17.38■□□□□ 0.37
COPS3-210ENST00000492672 EIF3DO15371 548 aaKnown RBP eCLIP17.37■□□□□ 0.37
COPS3-210ENST00000492672 FAM189A1O60320 539 aa17.37■□□□□ 0.37
COPS3-210ENST00000492672 OFD1O75665 1012 aa17.37■□□□□ 0.37
COPS3-210ENST00000492672 ITGA4P13612 1032 aa17.37■□□□□ 0.37
COPS3-210ENST00000492672 PRCPP42785 496 aa17.37■□□□□ 0.37
COPS3-210ENST00000492672 MATR3P43243 847 aaKnown RBP eCLIP17.37■□□□□ 0.37
COPS3-210ENST00000492672 MORC3Q14149 939 aa17.37■□□□□ 0.37
COPS3-210ENST00000492672 BMT2Q1RMZ1 405 aa17.37■□□□□ 0.37
COPS3-210ENST00000492672 LRRC55Q6ZSA7 311 aa17.37■□□□□ 0.37
COPS3-210ENST00000492672 ZNF689Q96CS4 500 aaPredicted RBP17.37■□□□□ 0.37
COPS3-210ENST00000492672 CCDC34Q96HJ3 373 aa17.37■□□□□ 0.37
COPS3-210ENST00000492672 LRCH3Q96II8 777 aa17.37■□□□□ 0.37
COPS3-210ENST00000492672 ZFP42Q96MM3 310 aa17.37■□□□□ 0.37
COPS3-210ENST00000492672 CASD1Q96PB1 797 aa17.37■□□□□ 0.37
COPS3-210ENST00000492672 GSDMAQ96QA5 445 aa17.37■□□□□ 0.37
COPS3-210ENST00000492672 TRIM6Q9C030 488 aaPredicted RBP17.37■□□□□ 0.37
COPS3-210ENST00000492672 NKX2-4Q9H2Z4 354 aa17.37■□□□□ 0.37
COPS3-210ENST00000492672 ELAC1Q9H777 363 aaKnown RBP17.37■□□□□ 0.37
COPS3-210ENST00000492672 PARP2Q9UGN5 583 aa17.37■□□□□ 0.37
COPS3-210ENST00000492672 STYXL1Q9Y6J8 313 aa17.37■□□□□ 0.37
COPS3-210ENST00000492672 LAMA3Q16787 3333 aa17.37■□□□□ 0.37
COPS3-210ENST00000492672 A0A0B4J269 797 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 GOLGA8IPA6NC78 632 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 GOLGA8JA6NMD2 632 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 TBKBP1A7MCY6 615 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 CLDN3O15551 220 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 TLL1O43897 1013 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 B4GALT3O60512 393 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 EOMESO95936 686 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 STAG3L1P0CL83 205 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 RAB27AP51159 221 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 MCL1Q07820 350 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 ALCAMQ13740 583 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 NOLC1Q14978 699 aaKnown RBP eCLIP17.36■□□□□ 0.37
COPS3-210ENST00000492672 ZNF658Q5TYW1 1059 aaPredicted RBP17.36■□□□□ 0.37
COPS3-210ENST00000492672 GSTCDQ8NEC7 633 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 SAAL1Q96ER3 474 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 GAD1Q99259 594 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 ADPGKQ9BRR6 497 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 MSTO1Q9BUK6 570 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 KCTD10Q9H3F6 313 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 HOOK1Q9UJC3 728 aaKnown RBP17.36■□□□□ 0.37
COPS3-210ENST00000492672 INPP5FQ9Y2H2 1132 aa17.36■□□□□ 0.37
COPS3-210ENST00000492672 A0A1W2PPC1 479 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 PPP1R3GB7ZBB8 358 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 RECQL4O94761 1208 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 MBD3O95983 291 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 CA3P07451 260 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 MCF2P10911 925 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 ACOT2P49753 483 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 WNT7BP56706 349 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 KNOP1Q1ED39 458 aaKnown RBP17.35■□□□□ 0.37
COPS3-210ENST00000492672 LRIT3Q3SXY7 679 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 CRELD2Q6UXH1 353 aaPredicted RBP17.35■□□□□ 0.37
COPS3-210ENST00000492672 POMGNT1Q8WZA1 660 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 CCDC47Q96A33 483 aaKnown RBP17.35■□□□□ 0.37
COPS3-210ENST00000492672 YME1L1Q96TA2 773 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 RAD9AQ99638 391 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 SEMA6BQ9H3T3 888 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 RSAD1Q9HA92 442 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 PLAGL2Q9UPG8 496 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 EXOC7Q9UPT5 735 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 RALGAPA2Q2PPJ7 1873 aa17.35■□□□□ 0.37
COPS3-210ENST00000492672 ARL5CA6NH57 179 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms