RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 HGSO14964 777 aaPredicted RBP10.35□□□□□ -0.75
VPS8-225ENST00000492449 ANPEPP15144 967 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 CHRNA3P32297 505 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 ZAP70P43403 619 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 POLR2FP61218 127 aaKnown RBP10.35□□□□□ -0.75
VPS8-225ENST00000492449 CDC16Q13042 620 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 ASIC2Q16515 512 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 KLHL35Q6PF15 583 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 BORAQ6PGQ7 559 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 CLNKQ7Z7G1 428 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 CCDC125Q86Z20 511 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 SNRNP27Q8WVK2 155 aaKnown RBP10.35□□□□□ -0.75
VPS8-225ENST00000492449 TELO2Q9Y4R8 837 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 SLC4A4Q9Y6R1 1079 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 PDGFRBP09619 1106 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 PYGMP11217 842 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 HALP42357 657 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 LONRF1Q17RB8 773 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 ANKRD13DQ6ZTN6 518 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 PHLDB2Q86SQ0 1253 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 CMTR1Q8N1G2 835 aaKnown RBP10.35□□□□□ -0.75
VPS8-225ENST00000492449 PROM2Q8N271 834 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 TCHPQ9BT92 498 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.35□□□□□ -0.75
VPS8-225ENST00000492449 NRDE2Q9H7Z3 1164 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 GPAMQ9HCL2 828 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 PLK2Q9NYY3 685 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 CLIC5Q9NZA1 410 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 ZNF180Q9UJW8 692 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 MYPNQ86TC9 1320 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 BOLA2-SMG1P6H3BVE0 249 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 BUD23O43709 281 aaKnown RBP10.35□□□□□ -0.75
VPS8-225ENST00000492449 ZNF862O60290 1169 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 PLCB3Q01970 1234 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 SYCP2LQ5T4T6 812 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 DCAF12L1Q5VU92 463 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 C1orf228Q6PIY5 440 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 OTUD6AQ7L8S5 288 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 PDSS2Q86YH6 399 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 LRRC15Q8TF66 581 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 DNAJC1Q96KC8 554 aaKnown RBP10.35□□□□□ -0.75
VPS8-225ENST00000492449 ZNF512BQ96KM6 892 aaPredicted RBP10.35□□□□□ -0.75
VPS8-225ENST00000492449 GOLPH3Q9H4A6 298 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 ERVK-5Q9HDB9 667 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 TCP11L1Q9NUJ3 509 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 NAGPAQ9UK23 515 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 AMFRQ9UKV5 643 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 WASF2Q9Y6W5 498 aa10.35□□□□□ -0.75
VPS8-225ENST00000492449 LAMB1P07942 1786 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 SCN11AQ9UI33 1791 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 FLT1P17948 1338 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 FRMPD4Q14CM0 1322 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 A0A087WZG4 1122 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 MATN2O00339 956 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 NDC80O14777 642 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 MAGEC1O60732 1142 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 SMIM18P0DKX4 95 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 FCER1AP12319 257 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 MCM7P33993 719 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 RPL5P46777 297 aaKnown RBP10.34□□□□□ -0.75
VPS8-225ENST00000492449 VPS41P49754 854 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 ARFIP2P53365 341 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 SCARF1Q14162 830 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 INF2Q27J81 1249 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 MAP7D1Q3KQU3 841 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 HSP90AA5PQ58FG0 334 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 ZNF362Q5T0B9 420 aaPredicted RBP10.34□□□□□ -0.75
VPS8-225ENST00000492449 KLHDC10Q6PID8 442 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 DHRS4L2Q6PKH6 230 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 FAM47EQ6ZV65 393 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 COPS6Q7L5N1 327 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 NET1Q7Z628 596 aaPredicted RBP10.34□□□□□ -0.75
VPS8-225ENST00000492449 ANKLE2Q86XL3 938 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 ARHGAP24Q8N264 748 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 GUF1Q8N442 669 aaKnown RBP10.34□□□□□ -0.75
VPS8-225ENST00000492449 PLEKHO2Q8TD55 490 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 GANQ9H2C0 597 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 DMTF1Q9Y222 760 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 FAM32AQ9Y421 112 aaKnown RBP10.34□□□□□ -0.75
VPS8-225ENST00000492449 ROBO2Q9HCK4 1378 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 NCANO14594 1321 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 PLCH1Q4KWH8 1693 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 ALS2Q96Q42 1657 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 SH3PXD2BA1X283 911 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 MAGEB3O15480 346 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 DNAJC6O75061 913 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 OR6B1O95007 311 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 PCCAP05165 728 aaPredicted RBP10.34□□□□□ -0.75
VPS8-225ENST00000492449 PRKCIP41743 596 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 NEK2P51955 445 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 WDR4P57081 412 aaKnown RBP10.34□□□□□ -0.75
VPS8-225ENST00000492449 PPP2R5CQ13362 524 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 KRT72Q14CN4 511 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 PDK4Q16654 411 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 LRRC24Q50LG9 513 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 FAM91A1Q658Y4 838 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 NEPROQ6NW34 567 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 IRF2BP2Q7Z5L9 587 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 SFR1Q86XK3 245 aa10.34□□□□□ -0.75
VPS8-225ENST00000492449 TREML1Q86YW5 311 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms