RNA–Protein interactions for RNA: ENST00000491998.5

DFFB-211, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,152 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-211ENST00000491998 ZNF219Q9P2Y4 722 aaPredicted RBP12.39□□□□□ -0.43
DFFB-211ENST00000491998 ABCB11O95342 1321 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 IGF2BP3O00425 579 aaKnown RBP eCLIP12.38□□□□□ -0.43
DFFB-211ENST00000491998 RGS16O15492 202 aaPredicted RBP12.38□□□□□ -0.43
DFFB-211ENST00000491998 UCHL3P15374 230 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 GPSM2P81274 684 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 RIPK1Q13546 671 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 SLC2A7Q6PXP3 512 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 NEK10Q6ZWH5 1172 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 COL23A1Q86Y22 540 aaPredicted RBP12.38□□□□□ -0.43
DFFB-211ENST00000491998 ZNF444Q8N0Y2 327 aaPredicted RBP12.38□□□□□ -0.43
DFFB-211ENST00000491998 ZNF713Q8N859 430 aaPredicted RBP12.38□□□□□ -0.43
DFFB-211ENST00000491998 PPP2R3CQ969Q6 453 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 SNX27Q96L92 541 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 MTMR9Q96QG7 549 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 ATP8A2Q9NTI2 1148 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 ARPP21Q9UBL0 812 aaPredicted RBP12.38□□□□□ -0.43
DFFB-211ENST00000491998 ITGB1BP2Q9UKP3 347 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 PNMA3Q9UL41 463 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 PPP1R9AQ9ULJ8 1098 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 CHMP2BQ9UQN3 213 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 RIMBP2O15034 1052 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 EDIL3O43854 480 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 ADRA2BP18089 450 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 FGFR4P22455 802 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 TCF7P36402 384 aaPredicted RBP12.38□□□□□ -0.43
DFFB-211ENST00000491998 TNNI2P48788 182 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 CAMK2BQ13554 666 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 SGSM1Q2NKQ1 1148 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 SLC44A4Q53GD3 710 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 PIGWQ7Z7B1 504 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 NT5DC3Q86UY8 548 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 MAK16Q9BXY0 300 aaKnown RBP12.38□□□□□ -0.43
DFFB-211ENST00000491998 CNOT10Q9H9A5 744 aaKnown RBP12.38□□□□□ -0.43
DFFB-211ENST00000491998 SSX2IPQ9Y2D8 614 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 FRMPD2Q68DX3 1309 aaPredicted RBP12.38□□□□□ -0.43
DFFB-211ENST00000491998 PDHA1P08559 390 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 CREB1P16220 341 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 VARSP26640 1264 aaKnown RBP12.38□□□□□ -0.43
DFFB-211ENST00000491998 TUFMP49411 452 aaKnown RBP12.38□□□□□ -0.43
DFFB-211ENST00000491998 PMS2P54278 862 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 UBE2Q1Q7Z7E8 422 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 CLMNQ96JQ2 1002 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 BCAS3Q9H6U6 928 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 ECT2Q9H8V3 914 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 STK17AQ9UEE5 414 aa12.38□□□□□ -0.43
DFFB-211ENST00000491998 CCDC188H7C350 402 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 SLC26A4O43511 780 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 FLOT1O75955 427 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 KRT16P08779 473 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 H2AFZP0C0S5 128 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 KRT13P13646 458 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 GNA11P29992 359 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 CASP5P51878 434 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 DR1Q01658 176 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 LRP8Q14114 963 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 UBE2SQ16763 222 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 TMEM266Q2M3C6 531 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 CFAP157Q5JU67 520 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 DCAF12L1Q5VU92 463 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 DENND2CQ68D51 928 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 CCSAPQ6IQ19 270 aaPredicted RBP12.37□□□□□ -0.43
DFFB-211ENST00000491998 H2AFVQ71UI9 128 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 ZNF554Q86TJ5 538 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 EIF1ADQ8N9N8 165 aaKnown RBP12.37□□□□□ -0.43
DFFB-211ENST00000491998 SCFD1Q8WVM8 642 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 RPGRQ92834 1020 aaKnown RBP12.37□□□□□ -0.43
DFFB-211ENST00000491998 ATP6V0A1Q93050 837 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 FAM114A2Q9NRY5 505 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 SUCLA2Q9P2R7 463 aaPredicted RBP12.37□□□□□ -0.43
DFFB-211ENST00000491998 CHORDC1Q9UHD1 332 aaPredicted RBP12.37□□□□□ -0.43
DFFB-211ENST00000491998 CACNA1SQ13698 1873 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 A0A1B0GUL6 1792 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 BHMG1C9JSJ3 638 aaPredicted RBP12.37□□□□□ -0.43
DFFB-211ENST00000491998 RGL2O15211 777 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 HSPA8P11142 646 aaKnown RBP12.37□□□□□ -0.43
DFFB-211ENST00000491998 NQO1P15559 274 aaKnown RBP12.37□□□□□ -0.43
DFFB-211ENST00000491998 SP100P23497 879 aaPredicted RBP12.37□□□□□ -0.43
DFFB-211ENST00000491998 NR2F2P24468 414 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 RFC5P40937 340 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 MMP13P45452 471 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 C12orf60Q5U649 245 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 TMEM154Q6P9G4 183 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 ZNF365Q70YC5 407 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 LMNTD2Q8IXW0 634 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 GABPB2Q8TAK5 448 aaPredicted RBP12.37□□□□□ -0.43
DFFB-211ENST00000491998 SH3RF3Q8TEJ3 882 aaPredicted RBP12.37□□□□□ -0.43
DFFB-211ENST00000491998 P3H4Q92791 437 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 RPS6KC1Q96S38 1066 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 MXD3Q9BW11 206 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 FGFR1OP2Q9NVK5 253 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 HESX1Q9UBX0 185 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 SEC63Q9UGP8 760 aaKnown RBP12.37□□□□□ -0.43
DFFB-211ENST00000491998 CIDEBQ9UHD4 219 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 HDAC9Q9UKV0 1011 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 KIAA1024Q9UPX6 916 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 DAAM1Q9Y4D1 1078 aa12.37□□□□□ -0.43
DFFB-211ENST00000491998 DDX3XO00571 662 aaKnown RBP eCLIP12.36□□□□□ -0.43
DFFB-211ENST00000491998 PLSCR1O15162 318 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms