RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 NR1H3Q13133 447 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 EXOC3L4Q17RC7 722 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 EDRF1Q3B7T1 1238 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 ACSBG2Q5FVE4 666 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 SEL1L2Q5TEA6 688 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 TTC27Q6P3X3 843 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 CCDC174Q6PII3 467 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 FRMD5Q7Z6J6 570 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 NEK8Q86SG6 692 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 CADPS2Q86UW7 1296 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 CCDC125Q86Z20 511 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 RIBC1Q8N443 379 aaPredicted RBP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 GLIS3Q8NEA6 775 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 NAT14Q8WUY8 206 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 CCDC77Q9BR77 488 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 CADM1Q9BY67 442 aaKnown RBP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 IQCGQ9H095 443 aaKnown RBP6.88□□□□□ -1.31
CCDC6-202ENST00000491922 OSGEPQ9NPF4 335 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 UBN1Q9NPG3 1134 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 NLRP2Q9NX02 1062 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 MTUS1Q9ULD2 1270 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 C10orf71Q711Q0 1435 aa6.88□□□□□ -1.31
CCDC6-202ENST00000491922 SMIM31A0A1B0GVY4 71 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 ASMTLO95671 621 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 ITGA2BP08514 1039 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 ZCCHC18P0CG32 403 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 KCNA6P17658 529 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 PON1P27169 355 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 ALDH1B1P30837 517 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 COILP38432 576 aaPredicted RBP6.87□□□□□ -1.31
CCDC6-202ENST00000491922 SLC18A1P54219 525 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 BPIFB4P59827 614 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 DSG1Q02413 1049 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 SULT2A1Q06520 285 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 DNAJC3Q13217 504 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 SPARCL1Q14515 664 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 TMEM259Q4ZIN3 620 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 KLC3Q6P597 504 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 DSTYKQ6XUX3 929 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 KIF6Q6ZMV9 814 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 HEATR3Q7Z4Q2 680 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 SRRM1Q8IYB3 904 aaKnown RBP6.87□□□□□ -1.31
CCDC6-202ENST00000491922 CCDC105Q8IYK2 499 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 ARHGAP24Q8N264 748 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 SLC30A5Q8TAD4 765 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 IRGQQ8WZA9 623 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 ALG3Q92685 438 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 MCUR1Q96AQ8 359 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 TUBGCP5Q96RT8 1024 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 MIPEPQ99797 713 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 TMEM165Q9HC07 324 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 KRT82Q9NSB4 513 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 BMP2KQ9NSY1 1161 aaPredicted RBP6.87□□□□□ -1.31
CCDC6-202ENST00000491922 STK32BQ9NY57 414 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 CYP2D7A0A087X1C5 515 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 FAM196BA6NMK8 535 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 ANKRD63C9JTQ0 380 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 SMIM22K7EJ46 135 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 GSC2O15499 205 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 HNRNPRO43390 633 aaKnown RBP6.87□□□□□ -1.31
CCDC6-202ENST00000491922 LGR5O75473 907 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 ITIH2P19823 946 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 RPL13P26373 211 aaKnown RBP6.87□□□□□ -1.31
CCDC6-202ENST00000491922 STAT1P42224 750 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 HADHBP55084 474 aaKnown RBP6.87□□□□□ -1.31
CCDC6-202ENST00000491922 WDR4P57081 412 aaKnown RBP6.87□□□□□ -1.31
CCDC6-202ENST00000491922 CAV1Q03135 178 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 ITGA9Q13797 1035 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 STAT4Q14765 748 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 GRM4Q14833 912 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 PDK4Q16654 411 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 TMEM119Q4V9L6 283 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 FYB2Q5VWT5 728 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 ZNF772Q68DY9 489 aaPredicted RBP6.87□□□□□ -1.31
CCDC6-202ENST00000491922 C11orf63Q6NUN7 778 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 MIGA2Q7L4E1 593 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 NLRP9Q7RTR0 991 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 SPATA24Q86W54 205 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 C12orf50Q8NA57 414 aaPredicted RBP6.87□□□□□ -1.31
CCDC6-202ENST00000491922 LNX1Q8TBB1 728 aaPredicted RBP6.87□□□□□ -1.31
CCDC6-202ENST00000491922 PPP2R3CQ969Q6 453 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 ZNF653Q96CK0 615 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 DNAJC19Q96DA6 116 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 FAM163AQ96GL9 167 aaPredicted RBP6.87□□□□□ -1.31
CCDC6-202ENST00000491922 CATSPER2Q96P56 530 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 RIOK1Q9BRS2 568 aaKnown RBP6.87□□□□□ -1.31
CCDC6-202ENST00000491922 KANSL2Q9H9L4 492 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 AAASQ9NRG9 546 aa6.87□□□□□ -1.31
CCDC6-202ENST00000491922 METTL5Q9NRN9 209 aaKnown RBP6.87□□□□□ -1.31
CCDC6-202ENST00000491922 TYW1Q9NV66 732 aaKnown RBP6.87□□□□□ -1.31
CCDC6-202ENST00000491922 A0A1W2PRG0 241 aa6.86□□□□□ -1.31
CCDC6-202ENST00000491922 BTBD19C9JJ37 291 aa6.86□□□□□ -1.31
CCDC6-202ENST00000491922 GYG2O15488 501 aa6.86□□□□□ -1.31
CCDC6-202ENST00000491922 PRPF4O43172 522 aaKnown RBP eCLIP6.86□□□□□ -1.31
CCDC6-202ENST00000491922 THAP12O43422 761 aa6.86□□□□□ -1.31
CCDC6-202ENST00000491922 NMT2O60551 498 aa6.86□□□□□ -1.31
CCDC6-202ENST00000491922 EXOC3O60645 756 aa6.86□□□□□ -1.31
CCDC6-202ENST00000491922 VAV1P15498 845 aa6.86□□□□□ -1.31
CCDC6-202ENST00000491922 TXKP42681 527 aa6.86□□□□□ -1.31
CCDC6-202ENST00000491922 NT5C2P49902 561 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms