RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 IFNLR1Q8IU57 520 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-219ENST00000491747 ELOA2Q8IYF1 753 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-219ENST00000491747 DAW1Q8N136 415 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 C17orf80Q9BSJ5 609 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 CARD6Q9BX69 1037 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 INO80BQ9C086 356 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-219ENST00000491747 C1orf112Q9NSG2 853 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 RNF19AQ9NV58 838 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 FANCLQ9NW38 375 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 DACH1Q9UI36 760 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 PPP2R2CQ9Y2T4 447 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 COL6A3P12111 3177 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 NPHP3-ACAD11A0A0J9YXS1 232 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 ATF7P17544 494 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-219ENST00000491747 PLCG1P19174 1290 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 CASQ1P31415 396 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 UBA7P41226 1012 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 PLA2G4AP47712 749 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 POU5F1BQ06416 359 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 MAPK7Q13164 816 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 ADGRE1Q14246 886 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 AMHR2Q16671 573 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 ARSHQ5FYA8 562 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 KRBA2Q6ZNG9 492 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 ECHDC2Q86YB7 292 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 GPR161Q8N6U8 529 aaKnown RBP10.3□□□□□ -0.76
BRCA1-219ENST00000491747 SYT2Q8N9I0 419 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-219ENST00000491747 ARNTL2Q8WYA1 636 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 SYMPKQ92797 1274 aaKnown RBP10.3□□□□□ -0.76
BRCA1-219ENST00000491747 BAG1Q99933 345 aaPredicted RBP10.3□□□□□ -0.76
BRCA1-219ENST00000491747 CCSER1Q9C0I3 900 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 NT5C3AQ9H0P0 336 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 AGPAT5Q9NUQ2 364 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 MTUS1Q9ULD2 1270 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 KCNH3Q9ULD8 1083 aa10.3□□□□□ -0.76
BRCA1-219ENST00000491747 PIN4Q9Y237 131 aaKnown RBP10.3□□□□□ -0.76
BRCA1-219ENST00000491747 A0A087X0B3 334 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 TTLL13PA6NNM8 815 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 HIP1RO75146 1068 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 EDN1P05305 212 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 PLA2G4BP0C869 781 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 FGFR1P11362 822 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 PHKA2P46019 1235 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 RAD51AP2Q09MP3 1159 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 TFDP1Q14186 410 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 PAN2Q504Q3 1202 aaKnown RBP10.29□□□□□ -0.76
BRCA1-219ENST00000491747 UBXN11Q5T124 520 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 CPB2Q96IY4 423 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 CDK5RAP3Q96JB5 506 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 KIFC3Q9BVG8 833 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 CHST12Q9NRB3 414 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 HCSTQ9UBK5 93 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 USP20Q9Y2K6 914 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 PCDHB7Q9Y5E2 793 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 PCDHA5Q9Y5H7 936 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 MYO9BQ13459 2157 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 ADGRA3Q8IWK6 1321 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 PLXNA4Q9HCM2 1894 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 A0A0U1RQF3 1178 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 LRRIQ4A6NIV6 560 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 MEIS3P2A8K0S8 358 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 SFI1A8K8P3 1242 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 INO80B-WBP1J3KQ70 363 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 B4GALT5O43286 388 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 TSPAN1O60635 241 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 SSBP05455 408 aaKnown RBP eCLIP10.29□□□□□ -0.76
BRCA1-219ENST00000491747 STAG3L1P0CL83 205 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 ERVK-21P61565 698 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 GNG11P61952 73 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 MCM6Q14566 821 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 LONRF3Q496Y0 759 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 CDCA2Q69YH5 1023 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-219ENST00000491747 SPECC1LQ69YQ0 1117 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 ZNF598Q86UK7 904 aaKnown RBP10.29□□□□□ -0.76
BRCA1-219ENST00000491747 TMEM139Q8IV31 216 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 KRI1Q8N9T8 703 aaKnown RBP10.29□□□□□ -0.76
BRCA1-219ENST00000491747 CALML4Q96GE6 196 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 NFKBIZQ9BYH8 718 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 TMEM161AQ9NX61 479 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 LRFN2Q9ULH4 789 aa10.29□□□□□ -0.76
BRCA1-219ENST00000491747 SLC26A4O43511 780 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 LPXNO60711 386 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 CACNB1Q02641 598 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-219ENST00000491747 FAM43BQ6ZT52 329 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-219ENST00000491747 CDR2LQ86X02 465 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-219ENST00000491747 LPPQ93052 612 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 TGS1Q96RS0 853 aaKnown RBP10.28□□□□□ -0.76
BRCA1-219ENST00000491747 ELAC1Q9H777 363 aaKnown RBP10.28□□□□□ -0.76
BRCA1-219ENST00000491747 MRPL42Q9Y6G3 142 aaKnown RBP10.28□□□□□ -0.76
BRCA1-219ENST00000491747 FANCGO15287 622 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 ARF4P18085 180 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-219ENST00000491747 CDK11BP21127 795 aaKnown RBP10.28□□□□□ -0.76
BRCA1-219ENST00000491747 GUCY2CP25092 1073 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 NAMPTP43490 491 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 TBX2Q13207 712 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-219ENST00000491747 GPS2Q13227 327 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 BTG3Q14201 252 aaPredicted RBP10.28□□□□□ -0.76
BRCA1-219ENST00000491747 NAALADL2Q58DX5 795 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 CLLU1OSQ5K130 101 aa10.28□□□□□ -0.76
BRCA1-219ENST00000491747 TWF2Q6IBS0 349 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms